Modeling receptor flexibility in the structure-based design of KRASG12C inhibitors

Journal of Computer-Aided Molecular Design - KRAS has long been referred to as an ‘undruggable’ target due to its high affinity for its cognate ligands (GDP and GTP) and its lack of...     

From cluster assembly to ultrathin nanocrystals and complex nanostructures

Ultrathin nanostructures have attracted much attention in recent years due to their predictable novel properties and various potential applications. The improvement in synthetic skills has led to many successful syntheses of nanostructures including zerodimensional (0D) nanoclusters, one-dimensional (1D) nanowires, two-dimensional (2D) nanosheets and other higher-level complex nanostructures, where cluster-assembly of primary nanocrystals is a common process. In this review, progress in ultrathin nanocrystals in the last decade and several important factors in the growth mechanisms are covered. By giving examples of cluster assembly from 1D to 3D nanostructures, the utility of cluster assembly in the synthesis of new materials has been demonstrated.     

燃煤锅炉粉煤灰中典型痕量金属元素淋滤特性研究

本文通过批淋滤实验研究了某电厂2号炉三个静电除尘器下粉煤灰中Cd、Cr、Pb、V的淋滤特性.淋滤液选择pH=4的HCI和pH=10的NaOH溶液,液固比为4:1;批淋滤选取从15分钟到7天的14个时间进行.实验结果显示,在实验条件下,Cr在酸性条件下淋出滤较高,而Pb在碱性条件下淋出滤较高;其中Cr随着淋滤时间的增加,淋出滤有显著增加,且三种粉煤灰中淋出滤大小为LCr3>LCr2>LCr1.     

Synthesis of Calix[4]arene Derivatives Containing a Nucleobase and their Interaction with Complementary Nucleosides at the Air–Water Interface

Amphiphilic calix[4]arene derivatives with a nucleobase on the lower rim have been synthesized in good yields by the condensation of calix[4]arenediamine {5,11,17,23-tetra-tert-butyl-25,27-bis(2-aminoethoxy)-26,28-dihydroxycalix[4]arene} with uracilo-N-acetic acid, thymino-N-acetic acid and adenino-N-propionic acid in the presence of CDI in DMF. Monolayers of the amphiphilic calix[4]arene-nucleobase derivatives on the surface of pure water, the aqueous subphases containing complementary nucleosides, were studied by film balance measurement and relaxation experiments. LB films deposited from all subphases were investigated by UV spectra and FT-IR spectroscopy. All the results indicate that the interaction between the nucleobases in the headgroup of amphiphilic p-tert-butylcalix[4]arene derivatives and the complementary nucleosides in the subphase takes place through multiple hydrogen bonding and the nucleosides can be transferred to solid substrates along with their monolayers.     

Discrimination and simultaneous determination of hydroquinone and catechol by tunable polymerization of imidazolium-based ionic liquid on multi-walled carbon nanotube surfaces

Tunable polymerization of ionic liquid on the surfaces of multi-walled carbon nanotubes (MWCNTs) was achieved by a mild thermal-initiation-free radical reaction of 3-ethy-1-vinylimidazolium tetrafluoroborate in the presence of MWCNTs. Successful modification of polymeric ionic liquid (PIL) on MWCNTs surfaces (PIL-MWCNTs) was demonstrated by scanning electron microscopy, transmission electron microscopy, Fourier transform infrared spectroscopy, thermogravimetric analysis and X-ray photoelectron spectroscopy. The resulting PIL-MWCNTs possessed unique features of high dispersity in aqueous solution and tunable thickness of PIL layer, due to positive imidazole groups along PIL chains and controllable ionic liquid polymerization by tuning the ratio of precursor. Based on cation-π interaction between the positive imidazole groups on PIL-MWCNTs surface and hydroquinone (HQ) or catechol (CC), excellent discrimination ability toward HQ and CC and improved simultaneous detection performance were achieved. The linear range for HQ and CC were 1.0 × 10⁻⁶ to 5.0 × 10⁻⁴ M and 1.0 × 10⁻⁶ to 4.0 × 10⁻⁴ M, respectively. The detection limit for HQ was 4.0 × 10⁻⁷ M and for CC 1.7 × 10⁻⁷ M (S/N = 3), correspondingly.     

Mechanism of Electrical Percolation of w/o Microemulsions Formed by Nonionic Surfactants

A study was carried out on the mechanism of electrical conductivity percolation of H₂O/C₁₆EO₂₀/n-butanol/heptane microemulsions. Electrical conductivity, UV-vis spectroscopy and FTIR spectra were used to study the diluted “dry” microemulsions with the mass ratio of C₁₆EO₂₀/n-butanol/heptane = 3:3:4. The results of electrical conductivity showed that the percolation occurred around φ_w = 20 wt% and the transition of w/o microemulsions to bicontinueous microemulsions happened when φ_w = 45 wt%. From the UV-vis absorption spectra, it was found that the absorption of methyl orange (MO) in microemulsions shifted red than that of in oil phase, but the maximal absorption peak (λ_max) remained unchanged when φ_w > 20 wt%. It implied that the position of MO solubilized in microemulsions was unvaried after free water appeared in the core. FTIR spectra revealed that the OH band of water in microemulsions moved to high frequency at low φ_w (< 20 wt%) and became broader at high φ_w. It indicated that the added water only caused the hydration of EO at low φ_w, the hydration completed when φ_w > 20 wt% and then the residual water entered into the core with properties similar to bulk water. The presence of free water as ions exchange medium will cause the electrical conductance increased. The percolation appeared after the hydration of EO completed.     

An ionic liquid-based sorbent for solid phase extraction of trace iron(Ш) from biological and natural water samples

A new ionic liquid modified silica gel sorbent was prepared from the reaction of active silica gel with N-3-(-3-triethoxysilylepropyl)-3-methylimidazolium chloride ([(TESP)MIm]Cl). This sorbent was exploited as solid phase extractant for separation and preconcentration of metal ions prior to their determination by inductively coupled plasma atomic emission spectrometry (ICP-AES). It was found that it can selectively adsorb Fe(Ш). Identification of the surface modification was performed on the basis of FT-IR. Experimental conditions for effective adsorption of trace Fe(Ш) were optimised using both batch and column procedures. At pH 3, Fe(Ш) could be quantitatively adsorbed and completely eluted by using 2?mL of 0.1?mol?L^?1 of HCl. 150?mL of sample solution was adopted as the maximum sample volume and a high enrichment factor of 75 was obtained. Most common coexisting ions did not interfere with the separation and preconcentration of Fe(Ш) at optimal conditions. The maximum static adsorption capacity of the sorbent was 37.0?mg?g^?1. The detection limit of the present method was 0.48?µg?L^?1, and the relative standard deviation (R. S. D.) was lower than 1.7%. The method was successfully applied to the preconcentration of trace Fe(Ш) in biological and natural water samples with satisfactory results.     

Bioconjugation of Proteins with a Paramagnetic NMR and Fluorescent Tag

Site‐specific labeling of proteins with lanthanide ions offers great opportunities for investigating the structure, function, and dynamics of proteins by virtue of the unique properties of lanthanides. Lanthanide‐tagged proteins can be studied by NMR, X‐ray, fluorescence, and EPR spectroscopy. However, the rigidity of a lanthanide tag in labeling of proteins plays a key role in the determination of protein structures and interactions. Pseudocontact shift (PCS) and paramagnetic relaxation enhancement (PRE) are valuable long‐range structure restraints in structural‐biology NMR spectroscopy. Generation of these paramagnetic restraints generally relies on site‐specific tagging of the target proteins with paramagnetic species. To avoid nonspecific interaction between the target protein and paramagnetic tag and achieve reliable paramagnetic effects, the rigidity, stability, and size of lanthanide tag is highly important in paramagnetic labeling of proteins. Here 4′‐mercapto‐2,2′: 6′,2′′‐terpyridine‐6,6′′‐dicarboxylic acid (4MTDA) is introduced as a a rigid paramagnetic and fluorescent tag which can be site‐specifically attached to a protein by formation of a disulfide bond. 4MTDA can be readily immobilized by coordination of the protein side chain to the lanthanide ion. Large PCSs and RDCs were observed for 4MTDA‐tagged proteins in complexes with paramagnetic lanthanide ions. At an excitation wavelength of 340 nm, the complex formed by protein–4MTDA and Tb³⁺ produces high fluorescence with the main emission at 545 nm. These interesting features of 4MTDA make it a very promising tag that can be exploited in NMR, fluorescence, and EPR spectroscopic studies on protein structure, interaction, and dynamics.     

基于氮氧自由基配体的锰和钴双核配合物的分子结构和磁性

合成了2个基于氮氧自由基配体且结构类似的双核配位化合物,其分子式分别为[Mn₂(hfac)₄(NIT-mo-pmy)₂](1)和[CO₂(hfac)₄(NIT-mo-pmy)₂](2),其中hfac=六氟乙酰丙酮,NIT-mo-pmy=2-(2-甲氧基-5′-嘧啶基)-4,4,5,5-四甲基咪唑啉基-3-氧-1-氧自由基。2个配合物均属于三斜晶系P1空间群,其双核配位单元进一步构筑为中心对称的平行四边形分子阵列。变温磁化率的测试表明,在2个配合物中,中心离子和氮氧自由基单元之间存在反铁磁交换作用。借助构效关系研究,分析了磁作用强度的差异。通过适当近似的磁化学模型,对Mn(Ⅱ)配合物的磁性行为进行了定量拟合,并与相关化合物磁作用强度进行了比对、分析。