Total synthesis of (+)-davidiin

Quite strained: The total synthesis of (+)-davidiin, an ellagitannin with more substituents in axial than in equatorial positions, requires a conformational lock of the glucose, induced by steric repulsion between adjacent bulky silyloxy groups. This conformational lock played a pivotal role in 1)?the β-selective formation of the glycosyl ester at the anomeric position, 2)?the formation of the 1,6-HHDP bridge, and 3)?the complete control of axial chirality in the aryl-aryl coupling.     

Photocatalytic hydrogen evolution from carbon-neutral oxalate with 2-phenyl-4-(1-naphthyl)quinolinium ion and metal nanoparticles

Photocatalytic hydrogen evolution has been made possible by using oxalate as a carbon-neutral electron source, metal nanoparticles as hydrogen-evolution catalysts and the 2-phenyl-4-(1-naphthyl)quinolinium ion (QuPh(+)-NA), which forms the long-lived electron-transfer state upon photoexcitation, as a photocatalyst. The hydrogen evolution was conducted in a deaerated mixed solution of an aqueous buffer and acetonitrile (MeCN) [1:1 (v/v)] by photoirradiation (λ > 340 nm). The gas evolved during the photocatalytic reaction contained H(2) and CO(2) in a molar ratio of 1:2, indicating that oxalate acts as a two-electron donor. The hydrogen yield based on the amount of oxalate reached more than 80% under pH conditions higher than 6. Ni and Ru nanoparticles as well as Pt nanoparticles act as efficient hydrogen-evolution catalysts in the photocatalytic hydrogen evolution. The photocatalyst for hydrogen evolution can be used several times without significant deactivation of the catalytic activity. Nanosecond laser flash photolysis measurements have revealed that electron transfer from oxalate to the photogenerated QuPh˙-NA˙(+), which forms a π-dimer radical cation with QuPh(+)-NA [(QuPh˙-NA˙(+))(QuPh(+)-NA)], occurs followed by subsequent electron transfer from QuPh˙-NA to the hydrogen-evolution catalyst in the photocatalytic hydrogen evolution. Oxalate acts as an efficient electron source under a wide range of reaction conditions.     

Highly selective binding of naphthyridine with a trifluoromethyl group to cytosine opposite an abasic site in DNA duplexes

We report on highly selective binding of a naphthyridine derivative with a trifluoromethyl group to cytosine opposite an abasic site in DNA duplexes; the binding-induced fluorescence quenching is applicable to the analysis of a C-related single-base mutation in DNAs amplified by PCR.     

Biphenylene units possessing flammable and nonflammable characteristics in fluoroalkyl end-capped vinyltrimethoxysilane oligomeric silica gel matrices after calcination at 800 °C

Two kinds of fluoroalkyl end-capped vinyltrimethoxysilane oligomer [R_F-(VM) _n -R_F] silica nanocomposites containing biphenylene units were prepared by the sol-gel reactions of the corresponding oligomer with biphenylene-bridged ethoxysilanes or 4,4′-biphenol under alkaline conditions, respectively. One is the fluorinated oligomer/silica nanocomposites containing biphenylene units [R_F-(VM-SiO₂) _n –R_F/Ar-SiO ₂ ], of whose biphenylene units were incorporated into nanocomposite cores through the siloxane bondings, and the other is the fluorinated oligomer/silica nanocomposites containing biphenylene units [R_F-(VM-SiO₂) _n –R_F/Biphenol], of whose biphenylene units were directly encapsulated into nanocomposite cores through the sol–gel process. Interestingly, the shape of R_F-(VM-SiO₂) _n –R_F/Ar-SiO ₂ nanocomposites is morphologically controlled cubic particles; although the shape of R_F-(VM-SiO₂) _n –R_F/Biphenol nanocomposites is spherically fine particles. Thermogravimetric analyses ²H magic-angle spinning nuclear magnetic resonance, Ultraviolet visible, and fluorescent spectra showed that biphenylene units in R_F-(VM-SiO₂) _n –R_F/Ar-SiO ₂ nanocomposites have a flammable characteristic after calcinations at 800 °C; in contrast, biphenylene units in R_F-(VM-SiO₂) _n –R_F/Biphenol nanocomposites have a nonflammable characteristic even after calcination at 800 °C. X-ray photoelectron spectroscopy analyses of these two kinds of fluorinated nanocomposites showed that nonflammable characteristic toward biphenylene units in the silica gel matrices is due to the formation of ammonium hexafluorosilicate during the sol–gel process.     

Redox-responsive conformational alteration of aromatic amides bearing N-quinonyl system

Redox-induced conformational alteration of N-aryl-N-phenylamides, in which the N-aryl group consists of a hydroquinone–p-quinone system, was examined. The reduced form bearing a dihydroxyphenyl or dimethoxyphenyl group exists mainly in the E-form, whereas the oxidized form bearing a N-benzoquinone moiety takes the Z-form both in the crystal and in solution. This redox-induced conformational alteration is associated with a marked change in optical properties. This system appears to have suitable properties for use in external redox stimulus-responsive functional switching.     

Isolation,synthesis, and biological activity of biphenyl and m-terphenyl-type compounds from Dictyostelium cellular slime molds

From the fruiting bodies of Dictyostelium polycephalum, we obtained four aromatic compounds: dictyobiphenyl A (1) and B (2) and dictyoterphenyl A (3) and B (4). The synthesis of 1–4 was performed to confirm the structures and obtain sufficient material for biological evaluation. Compound 3 was the first example of nitrogen-containing natural m-terphenyls, and the isolation of novel classes of compounds such as 3 shows that cellular slime molds are promising sources in natural product chemistry. Moreover, dictyoterphenyl A (3) showed cancer cell-selective antiproliferative activity (IC₅₀ 2.3–8.6 μM).     

Furanose ring conformations in a 1′-alkynyl C-nucleoside and the dinucleotide

A large-scale synthesis was carried out for alkynyl C-nucleotide oligomers in order to clarify the structural details of the artificial DNA. A liquid-phase synthesis by means of phosphoramidite methodology enabled us to handle ～0.1 g of the DNA oligomers possessing a pseudouracil derivative (T*) as a non-natural nucleobase. ¹H NMR measurements in aqueous media were carried out for the oligomers, succeeded in the accurate assignments of the protons accompanying with determination of the coupling constants (J values). These J values revealed that average conformation of the alkynylribose rings in the DNA was substantially biased toward the S-type conformers (²T₁/E₁/^OT₁). X-ray crystal analysis of the non-natural nucleoside also supported the S-type conformation (²E/²T₁) as seen in natural B-DNA.