Soft metal-mediated base pairing with novel synthetic nucleosides possessing an O,S-donor ligand

Metal-mediated base pairing with artificial ligand-bearing nucleosides allows site-selective metal incorporation inside DNA duplexes. In particular, this strategy has provided a general way of discrete, heterogeneous metal arrays in a programmable manner. To increase the kind of metallo-building blocks, we have newly synthesized two artificial nucleosides which have an O, S-donor ligand as the nucleobase moiety, mercaptopyridone ( M) and hydroxypyridinethione ( S). These nucleosides were found to efficiently form metal-mediated base pairs with soft transition metal ions such as Pd (2+) and Pt (2+).     

New concept of solute distribution around a diffusive crystal-solution interface of a binary Lennard-Jones mixture from the viewpoint of molecular dynamics

Directional crystallization from a binary mixture was performed by pseudo-NpT ensemble molecular dynamics. The initial crystal phase having a face-centered-cubic (fcc) structure grew toward the whole cell according to the temperature gradient in the universal cell. The growing crystal phase was not planar even though the solute molecules grew in two-dimensional coordinates because the solvent molecules disturbed the crystallization of the solute molecules at the diffusive crystal-solution interface. This represented the essential phenomenon of solute distribution during crystallization. Consequently, the growing crystal phase still contained solvent molecules having a liquid structure. The time change of the solute composition in the early phase of crystal growth showed an increase in solute composition as the time step proceeded. The resulting solute composition in this early phase was considered at different temperature gradients in the universal cell and it increased as the temperature of the initial crystal-solution interface increased. A new distribution coefficient model was proposed as a function of the difference between the local solute composition and bulk solute composition in the solution around the crystal-solution interface. The impurity-solvent distribution coefficient could be represented by the new model for faster growth of the lower temperature's initial interface. As regards a better distribution coefficient, there was found to be a very dilute solution phase over the crystal phase. The new variable "distribution rate" instead of the ambiguous variable "growth rate" was considered as a function of temperature gradient in the universal cell.     

Rhodium-catalyzed silylation and intramolecular arylation of nitriles via the silicon-assisted cleavage of carbon-cyano bonds

A rhodium-catalyzed silylation reaction of carbon-cyano bonds using disilane has been developed. Under these catalytic conditions, carbon-cyano bonds in aryl, alkenyl, allyl, and benzyl cyanides bearing a variety of functional groups can be silylated. The observation of an enamine side product in the silylation of benzyl cyanides and related stoichiometric studies indicate that the carbon-cyano bond cleavage proceeds through the deinsertion of silyl isocyanide from eta(2)-iminoacyl complex B. Knowledge gained from these studies has led to the development of a new intramolecular biaryl coupling reaction in which aryl cyanides and aryl chlorides are cross-coupled.     

Supratransmission in discrete one-dimensional lattices with the cubic–quintic nonlinearity

Nonlinear Dynamics - We numerically analyzed the supratransmission phenomenon in the discrete nonlinear Schrödinger equation with the cubic–quintic nonlinearity. It has been reported...     

Computation of a two-dimensional stress intensity factor by the boundary element method

Summary This paper presents a boundary element formulation for elastostatic problems. The formulation is expressed in terms of the matrix notation, so that it is easily applicable to an available system of matrix structural analysis. A computer program developed is used to calculate the stress intensity factor K _I for some example problems in plane elasticity. Comparison is made between the boundary element calculations and other solutions, whereby the effectiveness of the boundary element method is demonstrated.

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Berechnung eines zweidimensionalen Spannungsintensitätsfaktors mit der Methode der Bandelemente

Übersicht Dieser Aufsatz bietet eine Formulierung elastostatischer Probleme durch die Methode der Randelemente an. Die Formulierung benutzt eine Darstellung in Matrizenbezeichnung, so daß sie auf ein verfügbares System für Matrizenstrukturberechnung einfach anwendbar ist. Ein ausgebautes Computerprogramm wird auf die Berechnung des Spannungsintensitätsfaktors K _i für einige Beispiele in der ebenen Elastizität angewendet. Die mittels der Randelemente erhaltenen Ergebnisse werden mit anderen Lösungen verglichen. Dadurch zeigt sich die Wirksamkeit der Methode der Randelemente.

     

SUSY flavor structure of generic 5D supergravity models

We perform a comprehensive and systematic analysis of the SUSY flavor structure of generic 5D supergravity models on S ¹/Z ₂ with multiple Z ₂-odd vector multiplets that generate multiple moduli. The SUSY flavor problem can be avoided due to contact terms in the 4D effective K?hler potential peculiar to the multi-moduli case. A?detailed phenomenological analysis is provided based on an illustrative model.     

Magnetic structures of exchange bias Ni/FeF2(1 1 0) interface

Electronic and magnetic structures of ferromagnetic (FM)/antiferromagnetic (AFM), Ni/FeF₂(1 1 0), with a compensated AFM interface are investigated by using the full-potential linearized augmented plane-wave method. We find that magnetic structures at the AFM interface are perturbed by a contact with the FM material, where the superexchange interaction through the interface F excites and induces a small net moment at the AFM interface. These results predicted may play an important role for explaining the exchange bias in this system, and rule out the exchange bias mechanisms with the spin-flop coupling and the magnetic moment reorientation.     

Interaction of anti-aggregation agent dimethylethylammonium propane sulfonate with acidic fibroblast growth factor

Prevention of aggregation is critical for analyzing protein structure. Non-detergent sulfobetaines (NDSBs) are known to prevent protein aggregation, but the molecular mechanisms of their anti-aggregation effect are poorly understood. To elucidate the underlying mechanisms, we analyzed the effects of dimethylethylammonium propane sulfonate (NDSB-195) on acidic fibroblast growth factor (aFGF). NDSB-195 (0.5M) increased both aggregation and denaturation temperatures of aFGF by 4 degrees C. Chemical shift perturbation analyses indicated that many affected residues were located at the junction between a beta-strand (or 3(10)-helix) and a loop, irrespective of the chemical properties of the residue. The apparent dissociation constants of the interaction ranged from 0.04 to 3M, indicating weak interactions between NDSB and protein molecules.