Synthesis and spectroscopic characterization of copper(II)-nitrito complexes with hydrotris(pyrazolyl)borate and related coligands

This study focuses on the geometric (molecular) structures, spectroscopic properties, and electronic structures of copper(II)-nitrito complexes as a function of second coordination sphere effects using a set of closely related coligands. With anionic hydrotris(pyrazolyl)borate ligands, one nitrite is bound to copper(II). Depending on the steric demand of the coligand, the coordination mode is either symmetric or asymmetric bidentate, which leads to different ground states of the resulting complexes as evident from EPR spectroscopy. The vibrational spectra of these compounds are assigned using isotope substitution and DFT calculations. The results demonstrate that nu sym(N-O) occurs at higher energy than nu asym(N-O), which is different from the literature assignments for related compounds. UV-vis absorption and MCD spectra are presented and analyzed with the help of TD-DFT calculations. The principal binding modes of nitrite to Cu(II) and Cu(I) are also investigated applying DFT. Using a neutral tris(pyrazolyl)methane ligand, two nitrite ligands are bound to copper. In this case, a very unusual binding mode is observed where one nitrite is eta1-O and the other one is eta1-N bound. This allows to study the properties of coordinated nitrite as a function of binding mode in one complex. The N-coordination mode is easily identified from vibrational spectroscopy, where N-bound nitrite shows a large shift of nu asym(N-O) to >1400 cm-1, which is a unique spectroscopic feature. The optical spectra of this compound exhibit an intense band around 300 nm, which might be attributable to a nitrite to Cu(II) CT transition. Finally, using a bidentate neutral bis(pyrazolyl)methane ligand, two eta1-O coordinated nitrite ligands are observed. The vibrational and optical (UV-vis and MCD) spectra of this compound are presented and analyzed.     

Systematic solution-phase parallel synthesis of active vitamin D3 analogs with elongated side chains and their cell differentiation activities

Side-chain elongation of active vitamin D3 is acknowledged as a structural modification to enhance its cell differentiation activity; however, the comprehensive structure-activity relationship (SAR) as a result of this modification has not been reported. To clarify the SAR, we synthesized six analogs systematically elongated at the 24-position, 26,27-position, or both by methylene (normal A-ring series 1a-f) in a facile parallel solution-phase synthesis. Using parallel synthesis, we expanded the side chain-elongation study into two 19-exomethylene analog series: 19-nor-A-ring (4a-f) and 2-methylene-19-nor-A-ring (5a-f). In the 19-nor-A-ring analog series, the SAR induced by side-chain elongation was similar to the normal A-ring analog series, but in the 2-methylene-19-nor-A-ring series, the SAR was unique.     

Local structure around chloride ion in anion exchange resin

Neutron diffraction measurements on 35Cl/37Cl isotopically substituted anion exchange resins were carried out in order to obtain direct information on the local structure around the chloride ion absorbed in the resin. Structural parameters concerning the first nearest-neighbor interaction of chloride ions were determined through a least-squares fitting procedure of the observed first-order difference function, DeltaCl(Q). It has been revealed that the chloride ion is neighboring an ion exchange group (-CH2(CH3)3N+) with a Cl-...N distance of 3.10(3) A, and simultaneously bonded with 2.4(1) D2O molecules with a Cl-...D distance of 2.25(2) A. The second and third nearest water molecules around Cl- have also been observed. These results indicate that the direct ionic interaction between Cl- and -CH2(CH3)3N+ drastically reduces the number of first-neighbor water molecules around Cl- but enhances the long-distance structuring of the remaining water molecules in the environment surrounded by a hydrophobic polymer matrix.     

Color-tunable fluorescent organogels: columnar self-assembly of pyrene-containing oligo(glutamic acid)s

New fluorescent gelators containing pyrene moieties and dendritic oligopeptides have been developed. These molecules self-assemble into 1D helical columnar structures that lead to the formation of 3D fibrous random networks. The resulting gel materials show monomer emission of pyrenes because the hydrogen-bonded array of the oligopeptide moieties greatly suppresses the formation of pyrene excimers. In contrast, in the sol states green excimer emission of the pyrenes is observed because of the dissociation of intermolecular hydrogen bonds. This is the first example of the reverse-mode color switching of fluorescence for supramolecular pyrene assemblies.     

Plate, wire, mesh, microsphere, and microtube composed of sodium titanate nanotubes on a titanium metal template

Sodium titanate nanotube/titanium metal composites were synthesized by hydrothermal treatment of titanium metals with various morphologies such as plate, wire, mesh, microsphere, and microtube at 160 degrees C in aqueous NaOH solution and by the subsequent fixation treatment by calcination at 300 degrees C. The surface of the composite was covered with sodium titanate nanotubes with a diameter of approximately 7 nm, and the core part of the composite was titanium metal phase. The raw titanium metal acts as a template or a morphology-directing agent of micrometer size or more to arrange the nanotubes as well as a titanium source for the formation of nanotubes. The concentration of titanium species increases in the reaction solution as the dissolution of titanium metal is accelerated by the reaction between titanium and OH-. Furthermore, with an increase in concentration of titanium species in the reaction solution, the titanium species are re-precipitated as sodium titanate nanotubes onto the titanium metal. Titanium metal with a large surface area and volume can form sodium titanate nanotubes on the surface of the titanium metal, though titanium metal with a small volume and surface area tends to dissolve with the hydrothermal treatment. Even in the synthesis using titanium metal with a small volume and surface area, sodium titanate nanotubes are formed and cover the surface of the titanium metal by adding another titanium metal as a source of titanium species in the reaction solution.     

Vapor-phase synthesis of mesoporous SiO2-P2O5 thin films

Mesoporous SiO2-P2O5 films were synthesized from the vapor phase onto a silicon substrate. First, a precursor solution of cetyltrimethylammonium bromide (C16TAB), H3PO4, ethanol, and water was deposited on a silicon substrate by a spin-coating method. Then, the C16TAB-H3PO4 composite film was treated with tetraethoxysilane (TEOS) vapor at 90-180 degrees C for 2.5 h. The H3PO4-C16TAB composite formed a hexagonal structure on the silicon substrate before vapor treatment. The TEOS molecules penetrated into the film without a phase transition. The periodic mesostructure of the SiO2-P2O5 films was retained after calcination. The calcined films showed a high proton conductivity of about 0.55 S/cm at room temperature. The molar ratio of P/Si in the SiO2-P2O5 film was as high as 0.43, a level that was not attained by a premixing sol-gel method. The high phosphate group content and the ordered periodic mesostructure contributed to the high proton conductivity.     

Thermotropic liquid‐crystalline polymers having five‐membered heterocycles as mesogens, 6. Synthesis,thermotropic liquid‐crystalline and photoluminescent properties of novel semi‐rigid polyesters based on a terphenyl analogue of 1,3,4‐thiadiazole

Novel semi‐rigid thermotropic liquid‐crystalline (LC) polyesters containing terphenyl analogue of 1,3,4‐thiadiazole in the main chain were synthesized by melt polycondensation of a dioxydiundecanol derivative of 2,5‐diphenyl‐1,3,4‐thiadiazole with four aromatic diesters, and their structures were confirmed from FTIR, ¹³C NMR spectra and elemental analyses. Differential scanning calorimetry (DSC) measurements and polarizing microscope observations of textures showed that all the polymers form enantiotropic LC (smectic) phases. UV‐vis and photoluminescence (PL) spectra indicated that polyesters without nitro groups display maximum absorbances arising from 1,3,4‐thiadiazole moiety and blue‐emission maxima, the Stokes shifts being 69.5–79 nm in solution and 54–97 nm in the solid state.     

Theoretical study of reaction of trifluoromethyl radical with hydroxyl and hydrogen radicals

Ab initio molecular orbital theory and density functional theory calculations have been carried out on the reactions of the trifluoromethyl radical with the hydroxyl and the hydrogen radicals. These reactions are key reactions that underlie a new fire extinguishing mechanism of non-bromine-containing halon replacements. The activation energies calculated by the MP2 and QCISD methods are in good agreement with the experimental values. The B3LYP, as well as MP2 and QCISD, give good results for the calculations of the heats of reactions. The GAUSSIAN-1 and GAUSSIAN-2 theory calculations present the most acxcurate results on both the activation energies and the heats of reactions. The effects of the scaling factors on the activation energies and the heats of reactions are also evaluated. © 1998 John Wiley & Sons, Inc. J Comput Chem 19: 277–289, 1998     

Numerical comparisons of three recently proposed algorithms in the protein folding problem

We numerically compare the effectiveness of three recently proposed algorithms, multicanonical algorithm, simulations in a 1/k-sampling, and simulated tempering, for the protein folding problem. We perform simulations with high statistics for one of the simplest peptides, met-enkephalin. While the performances of all three approaches is much better than traditional methods, we find that the differences among the three are only marginal. © 1997 by John Wiley & Sons, Inc. J Comput Chem 18: 920–933, 1997