Phase determination by wavelength-modulated diffraction. I. Centrosymmetric case

Wavelength-modulated diffraction was developed by Iwasaki, Yurugi & Yoshimura [Acta Cryst. (1999), A55, 864-870] as a method for phase determination, in which the intensity of Bragg reflections is recorded using radiation whose wavelength is changing continually over a range in the vicinity of the absorption edge of an atom in the crystal. Using a ferrocene derivative crystal (chemical formula C36H32O7Fe, space group P2(1)/a) with the Fe atoms chosen as anomalous scatterers, measurements were made of the intensity gradient dI/d lambda of the reflections with an imaging plate as a detector on a synchrotron radiation source at Ritsumeikan University. In the case of a centrosymmetric crystal, the phase of the structure factor could be derived by measuring only the sign of dI/d lambda at one wavelength in the range. Of 104 reflections measured, the correct phase was assigned to 101 reflections. A discussion is given on the errors involved and on the limits of application of the method.     

In Vivo EPR Imaging of a Perfluoroalkyl Radical in Mouse Abdomen

Although it is thought that perfluoro-2,4-dimethyl-3-isopropyl-3-pentyl (PFR-2) is a candidate for electron paramagnetic resonance (EPR) imaging agents because of its high stability, no study has been made yet on the EPR imaging of PFR-2. In this study, EPR imaging of a phantom including PFR-2 and mice that had received PFR-2 was performed by an in vivo EPR imaging system operating at an EPR frequency of 700 MHz equipped with a bridged loop-gap resonator (inner diameter, 41 mm; axial length, 10 mm). Because PFR-2 is insoluble in water, it was dissolved in perfluorocarbon. The PFR-2 solution was put in cylindrical sample tubes with various inner diameters, and these sample tubes were placed together in a larger cylindrical sample tube filled with a physiological saline solution, which was used as a phantom. The spatial resolution was estimated to be about 3 mm on the basis of EPR imaging of the phantom. EPR images of mice that had received a PFR-2 injection via the intraperitoneal route indicated that PFR-2 remained in the peritoneal cavity even 2 days after the injection. This finding suggests that it is possible to perform EPR imaging of experimental animals using PFR-2 as an imaging agent which persists in a biological system. Authors' address: Hidekatsu Yokoyama, National Institute of Advanced Industrial Science and Technology, 2266-98 Anagahora, Shimoshidami, Moriyama-ku, Nagoya, Aichi 463-8560, Japan     

High-temperature protonic motion and low-temperature lattice deformation in one-dimensional hydrogen-bonded molecular chain in tetramethylpyrazine–chloranilic acid (1:1)

Recent theoretical advances have identified several computational algorithms that can be implemented utilizing quantum information processing (QIP), which gives an exponential speedup over the corresponding (known) algorithms on conventional computers. QIP makes use of the counter-intuitive properties of quantum mechanics, such as entanglement and the superposition principle. Unfortunately it has so far been impossible to build a practical QIP system that outperforms conventional computers. Atomic ions confined in an array of interconnected traps represent a potentially scalable approach to QIP. All basic requirements have been experimentally demonstrated in one and two qubit experiments. The remaining task is to scale the system to many qubits while minimizing and correcting errors in the system. While this requires extremely challenging technological improvements, no fundamental roadblocks are currently foreseen.     

High-Quality Protein Crystal Growth of Mouse Lipocalin-Type Prostaglandin D Synthase in Microgravity

Lipocalin-type prostaglandin (PG) D synthase (L-PGDS) catalyzes the isomerization of PGH(2) to PGD(2) and is involved in the regulation of pain and of nonrapid eye movement sleep and the differentiation of male genital organs and adipocytes, etc. L-PGDS is secreted into various body fluids and binds various lipophilic compounds with high affinities, acting also as an extracellular transporter. Mouse L-PGDS with a C65A mutation was previously crystallized with citrate or malonate as a precipitant, and the X-ray crystallographic structure was determined at 2.0 ? resolution. To obtain high-quality crystals, we tried, unsuccessfully, to crystallize the C65A mutant in microgravity under the same conditions used in the previous study. After further purifying the protein and changing the precipitant to polyethylene glycol (PEG) 8000, high-quality crystals were grown in microgravity. The precipitant solution was 40% (w/v) PEG 8000, 100 mM sodium chloride, and 100 mM HEPES-NaOH (pH 7.0). Crystals grew on board the International Space Station for 11 weeks in 2007, yielding single crystals of the wild-type L-PGDS and the C65A mutant, both of which diffracted at around 1.0 ? resolution. The crystal quality was markedly improved through the use of a high-viscosity precipitant solution in microgravity, in combination with the use of a highly purified protein.     

Formation of formal compounds in reaction of dimethyl phenols with formaldehyde

Formaldehyde was reacted with both 2,4-dimethylphenol(2,4-xyenol) and 2,6-dimethylphenol(2,6-xylenol), which are model compounds of monofunctional phenols, and the reaction products were subjected to HLC analysis to elucidate details of the formation process and bonding manner of a formal group, which can greatly affect the performance of phenol–formaldehyde resins. As a result, formal compounds of dimethylphenols were successfully separated by HLC. It was further found, as a result of tracing the reactions by HLC, that the formation of a formal group occurs at either position of the ortho and para positions, and that methylol compounds were formed following formation of the formal compounds. Furthermore, as a result of NMR analysis as well as consideration of solvation on the basis of the relative elution volumes of the nonacetylated and acetylated reaction products it was found that the formal group was added to the phenol nuclei.     

Growth of GaN single crystals with extremely low dislocation density by two-step dislocation reduction

We have discovered a mechanism which can significantly reduce the dislocation density during the growth of GaN single crystals in the Na flux method. The significant reduction of the dislocation density occurs in the later stage of LPE growth, rather than solely at the seed-LPE interface for which we have already reported evidence indicating the presence of bundling dislocations. The two-step dislocation reduction is the key in achieving extremely low dislocation density using this method.     

The difference between the ordinary height and the canonical height on elliptic curves

We estimate the bounds for the difference between the ordinary height and the canonical height on elliptic curves over number fields. Our result is an improvement of the recent result of Cremona, Prickett, and Siksek [J.E. Cremona, M. Prickett, S. Siksek, Height difference bounds for elliptic curves over number fields, J. Number Theory 116 (2006) 42-68]. Our bounds are usually sharper than the other known bounds.     

A new glycosylation method part 3: study of microwave effects at low temperatures to control reaction pathways and reduce byproducts

The efficiency of microwave irradiation at low temperature for glycosylations is described. Although oligosaccharide synthesis usually requires reactive donors for glycosylations, which have leaving groups on the anomer positions, i.e., trichloroacetoimidates, halogenates, thioalkyl glycosides, etc., the suitable donors in our microwave supported synthesis of Lewis X oligosaccharide were very stable acetate derivatives. Regarding glycosylation with a fucosyl acetate donor and a glucosamine acceptor, microwave irradiation with simultaneous cooling improved yields. Moreover, further synthesis to Lewis X derivatives was achieved only with microwave irradiation at low temperatures. Without microwave irradiation, we could only obtain byproducts and none of the designed product at any reaction temperature.