Conformation of glycomimetics in the free and protein-bound state: structural and binding features of the C-glycosyl analogue of the core trisaccharide alpha-D-Man-(1 --> 3)-[alpha-D-Man-(1 --> 6)]-D-Man

The conformational properties of the C-glycosyl analogue of the core trisaccharide alpha-D-Man-(1 --> 3)-[alpha-D-Man-(1 --> 6)]-D-Man in solution have been carefully analyzed by a combination of NMR spectroscopy and time-averaged restrained molecular dynamics. It has been found that both the alpha-1,3- and the alpha-1,6-glycosidic linkages show a major conformational averaging. Unusual Phi ca. 60 degrees orientations for both Phi torsion angles are found. Moreover, a major conformational distinction between the natural compound and the glycomimetic affects to the behavior of the omega(16) torsion angle around the alpha-1 --> 6-linkage. Despite this increased flexibility, the C-glycosyl analogue is recognized by three mannose binding lectins, as shown by NMR (line broadening, TR-NOE, and STD) and surface plasmon resonance (SPR) methods. Moreover, a process of conformational selection takes place, so that these lectins probably bind the glycomimetic similarly to the way they recognize the natural analogue. Depending upon the architecture and extension of the binding site of the lectin, loss or gain of binding affinity with respect to the natural analogue is found.     

What is the mechanism of oriented crystal growth on rubbed polymer substrates? Topography vs epitaxy

From the oriented growth of p-nitroaniline crystals on various rubbed polymer substrates, the orientation mechanism was found to basically rely upon the formation of intermolecular interactions at the crystal/polymer interface. The observations also show that the surface topography only plays a minor role in the oriented nucleation.     

Interactions between a nonionic gemini surfactant and cyclodextrins investigated by small-angle neutron scattering

The microstructure of complexes between hydroxypropyl-cyclodextrins (HPCDs) (alpha, beta, and gamma) and a novel gemini surfactant has been investigated by small-angle neutron scattering (SANS). This nonionic hetero-gemini surfactant (denoted NIHG750) contains two hydrophobic groups and two hydrophilic groups. One is a methyl-capped polyoxyethylene chain with 16 oxyethylene units and the other is a secondary hydroxyl group. Various form factor models have been considered for fitting the SANS data. Spherical aggregates (25 to 40 A) with a size slightly larger than that of NIHG750 micelles (about 23 A) appear in mixed systems. These could be micellar aggregates partly covered with a few cyclodextrin molecules. In addition, the results indicate rod formation (r approximately 8 A, L approximately 70 A) for the NIHG-HPCD complexes. This result is consistent with the threading of HPCDs onto NIHG750 to such an extent that the surfactant molecule takes an extended conformation at high levels of HPCD. Also, the results indicate that HPCDs may interact with the oxyethylene groups of the spherical micellar aggregates leading to an increase in micelle size and a gradual transformation to rod-shaped aggregates. The tendency to form rods increases in the order gamma-CD相似文献   

Sandwich structures at oil-water interfaces under alkaline conditions

Equilibrium liquid crystal (LC) layer on an interface between crude oils and water was observed at high pH. This layer is composed mainly of sodium naphthenates produced in situ at the water/oil interface. Transient LC layer was also evolved at the interface of aqueous phase of sodium hydroxide solutions and oleic phase of naphthenic acid (NA) solutions as result of a chemical reaction between NaOH and NA. This chemical reaction causes transport process resulting in a disturbance of the interface. Optical observation of this interface disturbance reviled that the interface covered with LC shows considerably lower flexibility as compared to LC free interface. The LC layer eventually dissolves in the water phase at low oil-to-water ratio, while at high oil-to-water ratio it can form an equilibrium phase, which spreads spontaneously at the oil-water interface.     

Copper sorption on a straw lignin: experiments and EPR characterization

Spectroscopic and physicochemical data, X-ray photoelectron spectroscopy (XPS), solid-state (13)C cross-polarization magic-angle-spinning NMR, GC/MS, specific surface area, site density, and surface acidity constants have been recorded or determined for a ligno-cellulosic substrate (LS) extracted from straw. Its copper(II)-bound ability has also been studied. The LS solid that exhibits two types of binding sites, carboxylic and phenolic groups, has a great affinity for copper(II), with a maximum of adsorption at around 4 mg g(-1) as early as the pH reaches 6. The structural characterization of the Cu(II) surface complexes has been investigated using EPR spectroscopy. The CuO(4) chromophore of the inner-sphere surface complexes is a slightly distorted square. A surface oxidation occurred simultaneously, which leads to semiquinonic radicals. Furthermore, our empirical approach, which used a correlation between thermodynamics data and EPR parameters, has led to a surface complexation constant log beta equal to 12.6. This indicates that copper(II) surface complexes are relatively stable.