Reproduction of distance matrices and original time series from recurrence plots and their applications

We propose a method to reproduce distance matrices and original time series from recurrence plots. The procedure is to (i)convert a recurrence plot to a weighted graph and (ii)calculate a distance between each pair of nodes on this weighted graph. We demonstrate this method by reproducing the topological shape of original time series. We also propose two applications. The first application is to obtain the maximal Lyapunov exponent from a recurrence plot without reproducing the shapes of original time series. The second application is to reconstruct a common deterministic driving force from observations of forced systems. Thus, the method opens new fields in data analysis.     

Solvent dependence of the ultrafast ground state recovery dynamics of phenol blue

We have studied femtosecond ground state recovery dynamics of phenol blue (PB) by pump-probe spectroscopy with a time resolution of 33 fs. Multiexponential decay with time constants extending from 300 fs to 10 ps were observed. Some low frequency intramolecular quantum beats were also observed. Solvent dependence of these decays and beats are discussed.     

Proficiency testing scheme for the harmonization and comparability of analytical measurements

According to the experience of the successful implementation of proficiency tests (PT) by using the certified reference value as the assigned value, a new scheme of evaluation is presented by suggesting the use of the uncertainty associated with the certified value. The technical performance of laboratories is evaluated by the parameter quadratic mean error (QME), which is the square root of the sum of the square of the bias and that of the standard deviation of the laboratory. This parameter is considered as the estimate of the measurement uncertainty of the laboratory and is compared to the uncertainty (U) associated with the certified value provided by an NMI. Considering that the calibration and measurement capability, known as the CMC, is recognized among NMIs, the ratio QME/U enables us to compare the PT relative to the CMC of an NMI, and, consequently, to any other comparison results based on the CMC of signatories of the mutual recognition arrangement (MRA) of the International Committee of Weights and Measure (CIPM). Presented at BERM-11, October 2007, Tsukuba, Japan.     

The effect of local structural disruption on the yield of photochemical ligation between anthracene-oligonucleotide conjugates.

The techniques of chemical ligation have attracted great attention as an alternative to enzymatic joining of DNA ends. Here we introduce the photoligation of anthracene-modified ODN conjugates through anthracene cyclodimer formation. The effect of the positions and the kinds of single base mismatch on the template was evaluated using eight templates with one-base displacements. We found out that the yield of the ligation was affected by mispairing in a position-dependent manner. Such results would be attributed to the disruption of the local structure at the ligation site.     

Catalyst‐free synthesis of polyorganosiloxanes by high temperature and pressure water. II. Understanding of the reaction process

A catalyst‐free polysiloxane synthetic process that uses high temperature and pressure water for the hydrolysis and subsequent polycondensation of phenyltrimethoxysilane was studied in detail to gain insights into the reaction mechanism. It was suggested that this process is essentially composed of two stages: (1) oligomerization of phenyltrimethoxysilane yielding low‐molecular weight species with high contents of silanol and methoxy groups and (2) polycondensation of the oligomers yielding high‐molecular weight species. The use of a preformed oligosiloxane as a starting material was informative to understand the polycondensation stage. A modified synthetic process in which a stop valve was introduced to control the internal pressure was developed based on the understanding of the present process. This modified process enabled a two‐stage reaction resulting in a discernible increase of the molecular weight of polysiloxane. © 2009 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 47: 2656–2663, 2009     

Role of pseudopolymorphism on concentration dependent competitive adsorption at a liquid/solid interface

We present for the first time a peculiar concentration effect on competitive adsorption of a binary mixture at the liquid/solid interface, which we attribute to the existence of pseudopolymorphism and its concentration dependence. These results are helpful for the understanding of phase behavior of multi-component systems at the interface.