Elongation factor Tu mutants expand amino acid tolerance of protein biosynthesis system

Nonnatural amino acids have been introduced into proteins using expanded protein biosynthesis systems. However, some nonnatural amino acids, especially those containing large aromatic groups, are not efficiently incorporated into proteins. Reduced binding efficiency of aminoacylated tRNAs to elongation factor Tu (EF-Tu) is likely to limit incorporation of large amino acids. Our previous studies suggested that tRNAs carrying large nonnatural amino acids are bound less tightly to EF-Tu than natural amino acids. To expand the availability of nonnatural mutagenesis, EF-Tu from the E. coli translation system was improved to accept such large amino acids. We synthesized EF-Tu mutants, in which the binding pocket of the aminoacyl moiety of aminoacyl-tRNA was enlarged. L-1-Pyrenylalanine, L-2-pyrenylalanine, and DL-2-anthraquinonylalanine, which are hardly or only slightly incorporated with the wild-type EF-Tu, were successfully incorporated into a protein using these EF-Tu mutants.     

Improved method for measurement of rhodanese activity using methanethiosulfonate as sulfur donor substrate and its application to human serum.

We have developed a sensitive method for the measurement of rhodanese activity in human serum which is based on the colorimetric method for the determination of thiocyanate produced from methanethiosulfonate and cyanide as substrates. Thiocyanate gives a red complex with ferric ion in an acidic condition. The present method is about 70-fold more sensitive than the conventional method using cyanide and thiosulfate as substrates and correlates well (r = 0.997) with the conventional method in bovine liver rhodanese. Within-run precision of the method is 0.91% for 420 units/l serum and the calibration curve is linear up to 1850 units/l. The normal value for human serum, determined by the present method on 31 healthy persons, was 20.9 +/- 20.0 units/l (mean +/- 2S.D.). Rhodanese activity was clearly elevated in some serum samples which were observed at abnormal values in some biochemical diagnostic tests and showed significant positive correlations with guanase activity (r = 0.728, p less than 0.01) and glutamic-oxalacetic transaminase activity (r = 0.625, p less than 0.01).     

Heterocycles. XXVI. A total synthesis of optically pure (+)-catechin pentaacetate

A total synthesis of optically pure (+)-catechin pentaacetate has been established using the (-)-chalcon epoxide (100% ee) derived from 3,4,2′,4′,6′-pentakis(methoxymethoxy)chalcon as the starting material. The optical purity of the product is confirmed by ¹H nmr analysis in the presence of a shift reagent.     

Second-derivative spectrophotometric study on the interactions of chlorpromazine and triflupromazine with bovine serum albumin

The second-derivative spectra of chlorpromazine (CPZ) or triflupromazine (TFZ) in buffer solutions (pH 7.4) containing various amounts of BSA (the reference solutions contained the same amount of BSA) showed derivative isosbestic points. The residual background signals derived from incomplete suppression of BSA signals can be entirely eliminated in the second-derivative spectra and BSA has spectrophotometrically one kind of binding site for CPZ or TFZ. The fractions of the drugs bound to BSA were calculated from the derivative intensity differences (ΔD values) of CPZ or TFZ before and after the addition of BSA. Scatchard plot experiments suggested that the binding of the drugs to BSA could be explained as a partition like non-specific binding model. The association constants (K) of CPZ or TFZ with BSA were calculated from the ΔD values according to the non-specific binding model by a nonlinear least-squares method. The K values were almost constant for all of the drug concentrations studied, and good reproducibility was obtained. The fractions predicted by the K values were in good coincidence to the observed values. These results confirm the usefulness of the proposed derivative method which does not need any separation procedures.     

Imaging of a pH-sensitive polymer brush on a porous membrane using atomic force microscopy in aqueous solution

Poly(methacrylic acid) was grafted on a nanoporous polycarbonate membrane using the glow-discharge method. Atomic force microscopy showed that the pore size is dependent upon pH in such a way that a low pH the graft chains are protonated and contracted to open the pore, whereas at high pH, the graft chains became extended, thus reducing the pore size. Water permeation through the graft membrane is regulated by the pH value. The permeation rate is low at high pH value and high at low pH. This phenomenon corresponds to the pore size.     

Biodegradation of chitin with enzymes and vital components

Chitin from squid pen was effectively degraded by the chitinase from Bacillus sp. PI-7S, while the degradation of chitin with lysozyme proceeded very slowly. Among the various vital components studied, the degradation of chitin from squid pen was performed not by canine serum, canine tela subcutanea, canine tela liver, and equine serum but by bovine serum and caprine serum. Noteworthy is the fact that chitin sponge subcutaneously implanted in dog reported not to have chitinase was degraded in ca. 14 days.     

Recent progress of high-power negative ion beam development for fusion plasma heating

A negative-ion-based neutral beam injector (N-NBI) has been constructed for JT-60U. The N-NBI is designed to inject 500 keV, 10 MW neutral beams using two ion sources, each producing a 500 keV, 22 A D⁻ ion beam. In the preliminary experiment using one ion source, a D⁻ ion beam of 13.5 A has been successfully accelerated with an energy of 400 keV (5.4 MW) for 0.12 s at an operating pressure of 0.22 Pa. This is the highest D⁻ beam current and power in the world. Co-extracted electron current was effectively suppressed to the ratio of Ie/I_D⁻ < 1. The highest energy beam of 460 keV, 2.4 A, 0.44 s has also been obtained. To realize 1 MeV class NBI system for ITER (International Thermonuclear Experimental Reactor), demonstration of ampere class negative ion beam acceleration up to 1 MeV is an important mile stone. To achieve the mile stone, a prototype accelerator and a 1 MV, 1 A test facility called MeV Test Facility (MTF) were constructed. Up to now, an H⁻ ion beam was accelerated up to the energy of 805 keV with an acceleration drain current of 150 mA for 1 s in a five stage electrostatic multi-aperture accelerator.     

Preparation of dibenzofuran-type amorphous polyetherketone by novel etherification reaction

4-Fluorobenzophenone reacted with potassium carbonate in the presence of silica catalyst in diphenyl sulfone solvent to yield 4,4′-dibenzoyldiphenyl ether. This new etherification reaction was extended to three difluoro aromatic ketones. 4,4′-Bis(4-fluorobenzoyl)diphenyl ether ( I ) reacted with potassium carbonate to yield a crystalline poly(oxy-1,4-phenylene-carbonyl-1,4-phenylene) (PEK) and 4,4′-bis{4-[4-(4-fluorobenzoyl)phenoxy]benzoyl}benzene ( II ) gave a crystalline poly(oxy-1,4-phenylene-carbonyl-1,4-phenylene-oxy-1,4-phenylene-carbonyl-1,4-phenylene-oxy-1,4-phenylene-carbonyl-1,4-phenylene-carbonyl-1,4-phenylene)(PEKEKEKK). 2,8-Bis(4-fluorobenzoyl)dibenzofuran ( III ) or 2,8-bis(4-chlorobenzoyl)dibenzofuran ( IV ) reacted with potassium carbonate to yield a poly(oxy-1,4-phenylene-carbonyl-2,8-dibenzofuran-carbonyl-1,4-phenylene) (PEKBK). The PEKBK was a noval amorphous polymer with the glass transition temperature of 222°C and it showed excellent thermal stability [T. Tanabe and I. Fukawa, Jpn. Pat., Kokai 64–74223 (1989)]. Several amorphous dibenzofuran type polyetherketone copolymers were prepared by coplycondensation of III with 4,4′-difluorobenzophenone ( V ) or 1,4-bis(4-fluorobenzoyl)benzene ( VI ) [T. Tanabe and I. Fukawa, Jpn. Pat., Kokai 1153722 (1989)]. © 1992 John Wiley & Sons, Inc.     

A quantum chemical study of interchain hopping model of negatively charged solitons in polyacetylene

Phonon-assisted interchain hopping of negatively charged solitons in polyacetylene has been studied using a local chemical reaction model CH + CH₄ → CH₄ + CH. Quantum chemical characteristics of the electron transfer process have been analyzed in terms of the dynamic electron density and the mutual polarization moment. The CH stretching vibrational motion of CH₄, which is a local model of the sp³ defect, has been found to play a significant role for the electron transfer. The excitation of the corresponding vibrational mode of the sp³ defect would promote the interchain hopping of the charged soliton. The electron transfer process has also been studied in terms of the “regional” density functional theory. It has been shown that the driving force of the electron transfer is represented by the regional chemical potentials.     

Defect Formation,T-Atom Substitution and Adsorption of Guest Molecules in MSE-Type Zeolite Framework—DFT Modeling

We used computational modeling, based on Density Functional Theory, to help understand the preference for the formation of silanol nests and the substitution of Si by Ti or Al in different crystallographic positions of the MSE-type framework. All these processes were found to be energetically favorable by more than 100 kJ/mol. We suggested an approach for experimental identification of the T atom position in Ti-MCM-68 zeolite via simulation of infrared spectra of pyridine and acetonitrile adsorption at Ti. The modeling of adsorption of hydrogen peroxide at Ti center in the framework has shown that the molecular adsorption was preferred over the dissociative adsorption by 20 to 40 kJ/mol in the presence or absence of neighboring T-atom vacancy, respectively.