Establishment of a fabrication method for a long-term actuated hybrid cell robot

We developed a novel method to fabricate a crab-like microrobot that can actuate for a long period in a physiological condition. The microrobot backbone was built with a biocompatible and elastic material-polydimethylsiloxane (PDMS)-by using a specially designed 3D molding aligner, and consisted of three strips of PDMS "legs" connected across a "body." Cardiomyocytes were then plated on the grooved top surface of the backbone, resulting in a high concentration of pulsating cells. These key techniques enabled the microrobot to walk continuously for over ten days. The performance of our crab-like microrobot was measured at an average velocity of 100 microm s(-1), and the estimated total distance it travelled was 50 m over a one-week period. Thus, we have demonstrated for the first time a walking robot that exhibited reliable and long-term actuation performances.     

CSSP2: an improved method for predicting contact-dependent secondary structure propensity

The calculation of contact-dependent secondary structure propensity (CSSP) has been reported to sensitively detect non-native β-strand propensities in the core sequences of amyloidogenic proteins. Here we describe a noble energy-based CSSP method implemented on dual artificial neural networks that rapidly and accurately estimate the potential for the non-native secondary structure formation in local regions of protein sequences. In this method, we attempted to quantify long-range interaction patterns in diverse secondary structures by potential energy calculations and decomposition on a pairwise per-residue basis. The calculated energy parameters and seven-residue sequence information were used as inputs for artificial neural networks (ANNs) to predict sequence potential for secondary structure conversion. The trained single ANN using the >(i, i ± 4) interaction energy parameter exhibited 74% accuracy in predicting the secondary structure of test sequences in their native energy state, while the dual ANN-based predictor using (i, i ± 4) and >(i, i ± 4) interaction energies showed 83% prediction accuracy. The present method provides a simple and accurate tool for predicting sequence potential for secondary structure conversions without using 3D structural information.     

Influence of spin-polarized current on superconductivity and the realization of large magnetoresistance

The superconducting state can be influenced by injecting spin-polarized current in a controlled manner by properly tailoring the interfacial transmittivity between a ferromagnet (F) and a superconductor (S), resulting in a large magnetoresistance of over 1100% for a F/I/S/I/F multilayer system (I insulator). Because of the competition between ferromagnetism and superconductivity, the superconducting transition temperature (T(C)) in the spin-parallel configuration is shifted below that in the spin antiparallel configuration. The T(C) shift is attributed to ferromagnet-induced nonequilibrium spin carriers in the superconductors.     

Experimental study on subharmonic and ultraharmonic acoustic waves in water-saturated sandy sediment

Experimental observations of the subharmonic and ultraharmonic acoustic waves in water-saturated sandy sediment are reported in this paper. Acoustic pressures of both nonlinear acoustic waves strongly depend on the driving acoustic pressure at a transducer. The first ultraharmonic wave reaches a saturation value as the driving acoustic pressure increases. The acoustic pressure levels of both nonlinear acoustic waves exhibit some fluctuations in comparison with that of the primary acoustic wave as the receiving distance of hydrophone increases in sediment. The subharmonic and the ultraharmonic phenomena in this study show close resemblance to those produced in bubbly water.     

Intracochlear pressure and derived quantities from a three-dimensional model

Intracochlear pressure is calculated from a physiologically based, three-dimensional gerbil cochlea model. Olson [J. Acoust. Soc. Am. 103, 3445-3463 (1998); 110, 349-367 (2001)] measured gerbil intracochlear pressure and provided approximations for the following derived quantities: (1) basilar membrane velocity, (2) pressure across the organ of Corti, and (3) partition impedance. The objective of this work is to compare the calculations and measurements for the pressure at points and the derived quantities. The model includes the three-dimensional viscous fluid and the pectinate zone of the elastic orthotropic basilar membrane with dimensional and material property variation along its length. The arrangement of outer hair cell forces within the organ of Corti cytoarchitecture is incorporated by adding the feed-forward approximation to the passive model as done previously. The intracochlear pressure consists of both the compressive fast wave and the slow traveling wave. A Wentzel-Kramers-Brillowin asymptotic and numerical method combined with Fourier series expansions is used to provide an efficient procedure that requires about 1 s to compute the response for a given frequency. Results show reasonably good agreement for the direct pressure and the derived quantities. This confirms the importance of the three-dimensional motion of the fluid for an accurate cochlear model.     

An orthogonal-plane PIV technique for the investigations of three-dimensional vortical structures in a turbulent boundary layer flow

An experimental investigation was carried out regarding a three-dimensional topology of a zero-pressure gradient turbulent boundary layer. In this study, the polarization separation technique has been applied to the PIV measurements. Two mutually perpendicular measurement planes have been employed in x–y and x–z planes, respectively. Synchronization between a stereoscopic PIV with another plane PIV system was made toward the detection of such salient features of the coherent structure as the legs and the head of the hairpin vortices. Polarization rotation via a half-waveplate and subsequent particle image separation using polarizer minimized the spurious particle images. The PIV results clearly demonstrate the presence of hairpin-like coherent vortical structures and coincidence between the near-wall quasi-streamwise vortex pair and the legs of the hairpin vortex.     

Caveolin-1 regulates osteoclast differentiation by suppressing cFms degradation

Caveolae are flask-shaped cell-surface membranes, which consist of cholesterol, sphingolipids and caveolin proteins. In a microarray analysis, we found that caveolin-1 (Cav-1) was upregulated by receptor activator of NFκB ligand (RANKL), the osteoclast differentiation factor. Silencing of Cav-1 inhibited osteoclastogenesis and also decreased the activation of mitogen-activated protein kinase and the induction of NFATc1 by RANKL. Cav-1 knockdown suppressed the expression of cFms and RANK, two major receptors for osteoclastogenesis. Interestingly, cFms expression was decreased only at the protein level, not at the messenger RNA (mRNA) level, whereas RANK expression was decreased at both the mRNA and protein levels. Furthermore, Cav-1 deficiency increased the lysosomal degradation of cFms. Taken together, these results demonstrate that Cav-1-dependent cFms stabilization contributes to efficient osteoclastogenesis.     

Dendrimeric siRNA for Efficient Gene Silencing

Programmable molecular self‐assembly of siRNA molecules provides precisely controlled generation of dendrimeric siRNA nanostructures. The second‐generation dendrimers of siRNA can be effectively complexed with a low‐molecular‐weight, cationic polymer (poly(β‐amino ester), PBAE) to generate stable nanostructures about 160 nm in diameter via strong electrostatic interactions. Condensation and gene silencing efficiencies increase with the increased generation of siRNA dendrimers due to a high charge density and structural flexibility.     

Development of Imidazoline‐2‐Thiones Based Two‐Photon Fluorescence Probes for Imaging Hypochlorite Generation in a Co‐Culture System

We designed and prepared the imidazoline‐2‐thione containing OCl^? probes, PIS and NIS , which operate through specific reactions with OCl^? that yield corresponding fluorescent imidazolium ions. Importantly, we demonstrated that PIS can be employed to image OCl^? generation in macrophages in a co‐culture system. We have also employed two‐photon microscopy and PIS to image OCl^? in live cells and tissues, indicating that this probe could have wide biological applications.     

Factors Affecting the Branching Ratio of Photodissociation: Thiophenol Studied through Quantum Wavepacket Dynamics

The photodissociation dynamics of thiophenol (PhSH) excited to the 1¹ππ* state was investigated by time‐dependent quantum wavepacket propagation within two‐dimensional (2D) space consisting of the S?H bond and ?SH torsion. We systematically studied the dependence of the branching ratio ${\left( {{{{\rm{\tilde A}}} \mathord{\left/ {\vphantom {{{\rm{\tilde A}}} {{\rm{\tilde X}}}}} \right. \kern-\nulldelimiterspace} {{\rm{\tilde X}}}}} \right)}$ between the two electronic states of the phenylthiyl radical (PhS^.) on several factors of the 2D potential energy surfaces (PESs). The effect of a reduced initial barrier to the first ππ*/πσ* conical intersection (CI) was found to be marginal, whereas the effects of a reduced torsional barrier of ?SH on the excited ππ* state and the mitigated slope of the πσ* PES between the first (ππ*/πσ*) and the second (πσ*/S₀) CIs were noticeable. The effect of the slope on the branching ratio has never been previously noticed. It was shown that the branching ratio can be sufficiently above unity without pre‐excitation of the torsion mode of ?SH, which has been assumed so far.