Identification of rat urinary glycoproteome captured by three lectins using gel and LC-based proteomics

Many different types of urine proteome studies have been done, but urine glycoprotein studies are insufficient. Therefore, we studied the glycoproteins from rat urine, which could be used to identify biomarkers in an animal model. First, urinary proteins were prepared by using the dialysis and lyophilizing methods from rat urine. Glycoproteins enriched with lectin affinity purification, concanavalin A, jacalin and wheat germ agglutinin from the urinary proteins were separated by means of reverse-phase fast protein LC (FPLC) or 1-D PAGE. Each FPLC fraction and 1-D PAGE gel band were trypsin-digested and analyzed by means of nanoLC-MS/MS. LC-MS/MS analyses were carried out by using linear ion trap MS. A total of 318 rat urinary glycoproteins were identified from the FPLC fractions and gel bands; approximately 90% of identified proteins were confirmed as glycoproteins in Swiss-Prot. Many glycoproteins, known as biomarkers, including C-reactive protein, uromodulin, amyloid beta A4 protein, alpha-1-inhibitor 3, vitamin D-binding protein, kallikrein 3 and fetuin-A were identified in this study. By studying urinary glycoproteins collected from rat, these results may help to assist in identifying urinary biomarkers regarding various types of disease models.     

Micromorphology and phase behavior of cationic polyurethane segmented copolymer modified with hydroxysilane

A series of cationic waterborne polyurethane dispersions (SiPU) modified with hydroxysilane (HPMS) were successfully synthesized based on poly(oxytetramethylene) glycols (PTMG) and isophorone isocyanate (IPDI), and the films were obtained by casting the dispersions on tetrafluoroethylene (TFE) plates. Effects of HPMS content on micromorphology, particle size of the dispersions were studied, as well as thermal properties, phase behavior and surface structure of the films. The particles had the morphology of a solid sphere, with particle size varying from 17.1 nm to 114.4 nm corresponding to the increase of HPMS concentration, which can be attributed to the increase of interfacial tension. XPS spectra indicated the surface migration of Si element in the process of film forming, and the SiPU surface was mainly composed of soft segments. DSC analysis, together with TG-DTG-DTA results demonstrated the HPMS soft segment merged with the transition region of PU matrix, forming part of polyurethane backbone, but an improved microphase separation was observed when HPMS concentration greater than 15%. It was also found that incorporation of flexible HPMS prevented the degradation of polyurethane backbone, resulting in the increase of thermal stability in ultimate copolymer.     

Highly diastereoselective and enantioselective formal [4 + 1] ylide annulation for the synthesis of optically active dihydrofurans

On the basis of the reactions of camphor-derived sulfur ylide with alpha-ylidene-beta-diketones, highly efficient and selective synthesis of optically active dihydrofurans has been achieved.     

ChemInform Abstract: Endohedral Nickel,Palladium, and Platinum Atoms in 10‐Vertex Germanium Clusters: Competition Between Bicapped Square Antiprismatic and Pentagonal Prismatic Structures

ChemInform is a weekly Abstracting Service, delivering concise information at a glance that was extracted from about 200 leading journals. To access a ChemInform Abstract of an article which was published elsewhere, please select a “Full Text” option. The original article is trackable via the “References” option.     

Synthesis of graft copolymer of ethyl cellulose through living polymerization and its self-assembly

Copolymers of ethyl cellulose (EC) with polystyrene (PSt) were synthesized through atom transfer radical polymerization (ATRP). The molecular weight of graft copolymers increased without any trace of the EC macro-initiator, and the polydispersity of the side chains was low. The molecular weight of the side chains increased with the monomer conversion. Kinetic study indicated that the polymerization was first order. The micelle characteristics of the graft copolymer in acetone were investigated using dynamic light scattering (DLS), atom force microscopy (AFM) and transmission electron microscopy (TEM). With increasing the concentration, micelles were gradually formed from the solution. The TEM and AFM images indicated that the micelles had spherical shape and showed core-shell structure.     

Syntheses and Crystal Structures of Two Chloro‐Bridged Coordination Polymers [Cd(BIM)Cl2]n and [Pb(BIM)Cl2]n

Two novel coordination polymers, [Cd(BIM)Cl₂]_n ( 1 ) and [Pb(BIM)Cl₂]_n ( 2 ) [wherein BIM = bis(imidazol‐1‐yl)methane], were synthesized by the reactions of the BIM ligand with CdCl₂ and PbCl₂, respectively. They were characterized by elemental analyses, IR, TGA and X‐ray single‐crystal diffraction techniques. Single‐crystal X‐ray structure analyses showed there is a pseudooctahedral arrangement around the cadmium atom in the complex 1 . It has a three‐dimensional network which contains one‐dimensional inorganic‐organic hybrid chains and μ₂‐bridging chloride ligands. A rare pentacoordinate square‐pyramidal arrangement was adopted for the lead(II) atom in the complex 2 , which has an unusual two‐dimensional layer structure of macrometallacycles crosslinked with the bridging Pb₂Cl₂ units. The metal atoms in both complexes were coordinated with two BIM ligands in cis arrangement and bridged by μ₂‐bridging chloride ligands.     

Reactivity of 2,2′‐Bis(2N‐(1,1′,3,3′‐tetramethyl‐guanidino))diphenylene‐amine with CuI and [Cu(MeCN)4][PF6]: Benzimidazole Formation vs. Cu Oxidation

The reaction of 2,2′‐Bis(2N‐(1,1′,3,3′‐tetramethyl‐guanidino))diphenylene‐amine (TMG₂PA) ( 1 ) with CuI in MeCN results in the formation of [Cu^II(TMG₂PA^amid)I] ( 2 ) indicatingthat Cu^I is the target of an oxidative attack of the N‐H proton of the ligand which itself is converted to molecular hydrogen. In contrast, if [Cu(MeCN)₄][PF₆] is used as the Cu^I source, [Cu^I₂(TMGbenz)₂][PF₆]₂ ( 3 ) is obtained instead. The use of the non‐coordinating counterion [PF₆]^– apparently prevents Cu^I from oxidation but induces itself a cyclisation reaction within the ligand which results in the formation of a benzimidazole‐guanidine ligand.     

Preparative isolation of pseudolaric acids A and B,and their glucosides from the root bark of Pseudolarix kaempferi using high‐speed counter‐current chromatography

In order to provide the chemical markers for the quality control of herbal medicines, four diterpenoids, pseudolaric acids A and B (PAA and PAB), and their glucosides were isolated from the methanol extract of the Chinese herb Pseudolarix kaempferi using high‐speed counter‐current chromatography (HSCCC). The diphase solvent system was n‐hexane/EtOAc/MeOH/H₂O which was used at two ratios (5:5:5:5 and 1:9:4:6 by volume) in the separation of pseudolaric acids and their glycosides, respectively. As a result, PAA (14 mg), PAB (129 mg), PAA‐O‐β‐D ‐glucopyranoside (8 mg, PAAG), and PAB‐O‐β‐D ‐glucopyranoside (42 mg, PABG) were obtained from 0.5 g of the crude extract. Their purities were determined to be above 97% by HPLC analysis. Their chemical structures were confirmed by ¹H and ¹³C NMR analysis or HPLC comparison with the reference compounds.