Defective graphene and nanoribbons: electronic,magnetic and structural properties

We make use of first-principles calculations, based on the density functional theory(DFT), to investigate the alterations at the structural, energetic, electronic andmagnetic properties of graphene and zigzag graphene nanoribbons (ZGNRs) due to theinclusion of different types of line and punctual defects. For the graphene it is foundthat the inclusion of defects breaks the translational symmetry of the crystal withdrastic changes at its electronic structure, going from semimetallic to semiconductor andmetallic. Regarding the magnetic properties, no magnetization is observed for thedefective graphene. We also show that the inclusion of defects at ZGNRs is a good way tocreate and control pronounced peaks at the Fermi level. Furthermore, defective ZGNRsstructures show magnetic moment by supercell up to 2.0μ_B. For the non defectiveZGNRs is observed a switch of the magnetic coupling between opposite ribbon edges from theantiferromagnetic to the ferrimagnetic and ferromagnetic configurations.     

Dielectric Spectroscopy Can Predict the Effect of External AC Fields on the Dynamic Adsorption of Lysozyme

This report describes the application of dielectric spectroscopy as a simple and fast way to guide protein adsorption experiments. Specifically, the polarization behavior of a layer of adsorbed lysozyme was investigated using a triangular-wave signal with frequencies varying from 0.5 to 2 Hz. The basic experiment, which can be performed in less than 5 min and with a single sample, not only allowed confirming the susceptibility of the selected protein towards the electric signal but also identified that this protein would respond more efficiently to signals with lower frequencies. To verify the validity of these observations, the adsorption behavior of lysozyme onto optically transparent carbon electrodes was also investigated under the influence of an applied alternating potential. In these experiments, the applied signal was defined by a sinusoidal wave with an amplitude of 100 mV and superimposed to +800 mV (applied as a working potential) and varying the frequency in the 0.1–10000 Hz range. The experimental data showed that the greatest adsorbed amounts of lysozyme were obtained at the lowest tested frequencies (0.1–1.0 Hz), results that are in line with the corresponding dielectric features of the protein.     

B-DNA Structure and Stability: The Role of Nucleotide Composition and Order

We have quantum chemically analyzed the influence of nucleotide composition and sequence (that is, order) on the stability of double-stranded B-DNA triplets in aqueous solution. To this end, we have investigated the structure and bonding of all 32 possible DNA duplexes with Watson–Crick base pairing, using dispersion-corrected DFT at the BLYP-D3(BJ)/TZ2P level and COSMO for simulating aqueous solvation. We find enhanced stabilities for duplexes possessing a higher GC base pair content. Our activation strain analyses unexpectedly identify the loss of stacking interactions within individual strands as a destabilizing factor in the duplex formation, in addition to the better-known effects of partial desolvation. Furthermore, we show that the sequence-dependent differences in the interaction energy for duplexes of the same overall base pair composition result from the so-called “diagonal interactions” or “cross terms”. Whether cross terms are stabilizing or destabilizing depends on the nature of the electrostatic interaction between polar functional groups in the pertinent nucleobases.     

How the Chalcogen Atom Size Dictates the Hydrogen-Bond Donor Capability of Carboxamides,Thioamides, and Selenoamides

The amino groups of thio- and selenoamides can act as stronger hydrogen-bond donors than of carboxamides, despite the lower electronegativity of S and Se. This phenomenon has been experimentally explored, particularly in organocatalysis, but a sound electronic explanation is lacking. Our quantum chemical investigations show that the NH₂ groups in thio- and selenoamides are more positively charged than in carboxamides. This originates from the larger electronic density flow from the nitrogen lone pair of the NH₂ group towards the lower-lying π*_C=S and π*_C=Se orbitals than to the high-lying π*_C=O orbital. The relative energies of the π* orbitals result from the overlap between the chalcogen np and carbon 2p atomic orbitals, which is set by the carbon-chalcogen equilibrium distance, a consequence of the Pauli repulsion between the two bonded atoms. Thus, neither the electronegativity nor the often-suggested polarizability but the steric size of the chalcogen atom determines the amide's hydrogen-bond donor capability.     

Double-walled carbon nanocones: stability and electronic structure

We have applied first-principles calculations, based on the density functional theory, toinvestigate the stability and electronic properties of double-walled carbon nanocones,60°60°, 120°120° and 60°120° with different rotation anglesbetween the walls. We have shown that the most favorable double-walled nanocone studiedhere is that of angles of 60°60°, with rotation angle of 36° and distance between apexes of 4.22 Å.We have found that, the interaction between the walls of rotated double-walled nanoconesintroduce geometric distortion in gap states, such as in Fermi level. These results shouldhave consequences on the field emission properties of double-walled carbon nanocones.Additionally, we also investigated the spin polarization of such structures, and we havefound unpaired electrons, which induces a total spin from 1 and 1/2 for 60°60° and 60°120° double cones, respectively.     

Synthesis and Characterization of Benzylidene Bis-Dithiobenzoate

Benzal chloride reacts with sodium sulfide in alcoholic solution to yield three main products: benzyl disulfide, benzyl dithiobenzoate, and a new interesting compound 5 , C ₂₁ H ₁₆ S ₄ , which was isolated and characterized as benzylidene bis-dithiobenzoate. The intermediates obtained from the autoxidation-reduction of the unisolable thiobenzaldehyde are implied in subsequent nucleophilic addition and substitution processes. NMR spectra and X-Ray structure analysis of 5 are discussed.     

Polyethylene waxes by metallocenes

The syntheses of low‐molecular‐weight polyethylene (PE), in the presence of catalysts based on five different metallocene frameworks, have been compared. High yields and low molecular masses, typical of industrially relevant PE waxes, can be easily achieved by using overpressure of hydrogen. Particularly suitable for the production of PE waxes are catalytic systems based on the C₂ symmetric rac‐dimethyl‐silyl‐bis‐(2‐methyl‐4‐phenyl‐1‐indenyl)‐zirconium dichloride ( 1 ) and the C_2v symmetric bis‐cyclopentadienyl‐zirconium dichloride ( 5 ). The wax yields can be substantially increased by increasing the MAO/Zr molar ratio. The control of the PE molecular weight allows an easy control of physical properties. In fact, as M_n increases in the range 10³–10⁴ g/mol, the degree of crystallinity decreases from nearly 85 to 60% while the melting temperature increases from 125°C up to 135°C. Copyright © 2010 John Wiley & Sons, Ltd.     

Clathrates with tetrahydrofuran of styrene‐p‐methyl styrene co‐syndiotactic copolymers

Clathrates with tetrahydrofuran of styrene‐p‐methyl styrene co‐syndiotactic copolymers have been characterized by wide‐angle X‐ray scattering and differential scanning calorimetry. Stable clathrate structures with THF molecules have been observed in whole range of composition. In particular, syndiotactic polystyrene like and syndiotactic poly‐p‐methylstyrene like clathrate phases are obtained for p‐methylstyrene contents lower and higher than 35% by mol, respectively.     

Poly(ester amide)s derived from L‐tartaric acid and amino alcohols. II. Aregic polymers

A series of aregic poly(ester amide)s (a‐PEAT6) with ester/amide ratios (a : b) varying from 1 : 19 to 1 : 2 were prepared with L ‐tartaric acid, 6‐aminohexanol, and 1,6 hexanediamine as the starting materials. Polycondensation in a solution of the diamine with mixtures of pentachlorophenyl‐activated di‐O‐methyl‐L ‐tartaric and 6‐aminohexyl‐di‐O‐methyl‐L ‐tartaric acids led to a‐PEAT6(a : b), with the a : b ratio determined by the composition of the feed. The newly synthesized poly(ester amide)s were characterized by elemental analysis, size exclusion chromatography, and IR and NMR spectroscopy. They had number‐average molecular weights between 25,000 and 45,000 and were highly crystalline, showing melting temperatures ranging from 100 to 230 °C and glass‐transition temperatures oscillating between 50 and 100 °C. The thermal degradation of a‐PEAT6(a : b) began above 200 °C and concluded with a final weight loss between 60 and 90% of the initial mass. The process evolved with the formation of cyclic tartarimide units and extensive main‐chain scissions. The degradation mechanism is discussed in relation to the chemical composition and microstructure of the polymers. © 2000 John Wiley & Sons, Inc. J Polym Sci A: Polym Chem 38: 2687–2696, 2000     

Poly(ethylene terephthalate) copolymers containing nitroterephthalic units. I. Synthesis and characterization

The synthesis, microstructure, and thermal behavior of a series of poly(ethylene terephthalate) (PET) copolymers containing nitroterephthalic units are described. These novel copolyesters were synthesized by transesterification followed by melt copolycondensation of dimethyl terephthalate and dimethyl nitroterephthalate mixtures with ethylene glycol. The molar ratio of the two comonomers in the feed varied from 95/5 to 25/75. Furthermore, PET and poly(ethylene nitroterephthalate) homopolymers were synthesized with the same method and comparatively studied. Copolyester compositions were practically the same as in the feed, and weight‐average molecular weights ranged from 10,000 to 60,000. The two monomeric units were randomly distributed along the polymer chain, and the experimentally determined average sequence lengths were in accordance with ideal copolycondensation statistics. Melting temperatures and enthalpies of the copolyesters decreased with increasing content in nitroterephthalic units, and they all showed a single glass‐transition temperature superior to that of PET. They appeared to be stable up to 300 °C, and thermal degradation occurred in two well‐differentiated steps. © 2000 John Wiley & Sons, Inc. J Polym Sci A: Polym Chem 38: 3761–3770, 2000