Reversible local-modification of surface structure on clean Ge(0 0 1) by scanning tunneling microscopy below 80 K

The structure of the clean Ge(0 0 1) surface is locally and reversibly changed between c(4×2) and p(2×2) by controlling the bias voltage of a scanning tunneling microscopy (STM) below 80 K. It shows hysteresis for the direction of the sample bias voltage change. The c(4×2) structure is observed with the sample bias voltage V_b?−0.7 V. This structure is maintained at V_b?0.7 V with increasing the bias voltage from −0.7 V. When V_b is higher than 0.8 V, the structure changes to p(2×2). This structure is then maintained at V_b?−0.6 V with decreasing the bias voltage from +0.8 V. The area of the structure change can be confined in the single dimer row just under the STM tip using a bias voltage pulse. In particular, the minimum transformed length is four dimers along the dimer row in the transformation from p(2×2) to c(4×2). The observed local change of the reconstruction with hysteresis is attributed to the energy transfer process from the tunneling electron to the Ge lattice in the local electric field due to the STM bias voltage. A phenomenological model is proposed for the structure changes. It is based on a cascade inversion of the dimer buckling orientation along the dimer row.     

Population inversion between the ground and first excited states in a recombining hydrogen plasma

Plasma conditions for generating a population inversion between the ground and first excited states in a recombining hydrogen plasma have been investigated on the basis of the CR model. Population inversion can be expected when three-body recombination plays a dominant role; the required regions of electron density and temperature are specified. It is shown that upper bounds exist for the ground-state population density at given electron density and temperature. Larger inversion densities can be obtained between the ground and first excited states than between excited levels. Numerical results are presented.     

Laryngeal sensory innervation: Origins of sensory nerve fibers in the nodose ganglion of the cat

Following horseradish peroxidase (HRP) application into each of the superior laryngeal nerve (SLN), internal branch (Int) and external branch (Ext) of the SLN, the inferior laryngeal nerve (ILN), and the anterior branch (Ant) of the ILN, all labeled sensory neurons were found in the nodose ganglion (NG) of cats ipsilaterally. Labeled neurons of the SLN were seen in the rostral part of the NG. Within the rostral part of the ganglion, sensory neurons of the Int-SLN were aggregated and occupied the most rostral part while those of the Ext-SLN were scattered and in the middle part. Cell bodies of the ILN were slightly compact and located in the rostral part of the NG, extending to the middle part. Within the rostral and middle part of the NG, labeled neurons of the Ant-ILN were sparse and occupied in the middle part. Laryngeal sensory cell bodies were unipolar neurons of medium size. The mean number of labeled neurons of the SLN was 336 whereas that of the ILN was 124.     

Coupled nano-plasmons

High aspect-ratio nanochannels were fabricated by irradiating polyimide films with swift heavy ions of 2.2 GeV energy and subsequently sensitising and etching the ion tracks in hydrogen peroxide and sodium hypochloride, respectively. The nanochannels were analysed by means of small angle X-ray scattering in combination with a new form factor model that considers bi-conical channel geometry. This approach allows us to tune the etching parameters for controlled channel shape adjustment.     

Using pharmacophore models to gain insight into structural binding and virtual screening: an application study with CDK2 and human DHFR

This study provides results from two case studies involving the application of the HypoGenRefine algorithm within Catalyst for the automated generation of excluded volume from ligand information alone. A limitation of pharmacophore feature hypothesis alone is that activity prediction is based purely on the presence and arrangement of pharmacophoric features; steric effects remained unaccounted. Recently reported studies have illustrated the usefulness of combining excluded volumes to the pharmacophore models. In general, these excluded volumes attempt to penalize molecules occupying steric regions that are not occupied by active molecules. The HypoGenRefine algorithm in Catalyst accounts for steric effects on activity, based on the targeted addition of excluded volume features to the pharmacophores. The automated inclusion of excluded volumes to pharmacophore models has been applied to two systems: CDK2 and human DHFR. These studies are used as examples to illustrate how ligands could bind in the protein active site with respect to allowed and disallowed binding regions. Additionally, automated refinement of the pharmacophore with these excluded volume features provides a more selective model to reduce false positives and a better enrichment rate in virtual screening.     

p-Phenylenediamine Epoxy Resin Film for Redox Enzyme Detection

Summary: Phenylenediamine derivatives (PDs) are environmentally hazardous, though very useful for chemical analysis. To minimize release into the environment, a PD-containing epoxy resin film was developed that retained redox enzyme activity. p-Phenylenediamine and 2,2-bis(4-glycidyloxyphenyl)-propane were cured to produce a violet film. This film was reactive against peroxidase, a redox enzyme that oxidizes phenylenediamine to afford an imine. Enzymatic oxidation caused the film to change color from violet to deep green. The film exhibited fluorescence at 394 nm under excitation at 350 nm, and the fluorescent intensity decreased with greater oxidation. Thus, the film could be used to detect redox enzyme activity.     

SPring‐8 BL36XU: Synchrotron Radiation X‐Ray‐Based Multi‐Analytical Beamline for Polymer Electrolyte Fuel Cells under Operating Conditions

We designed and constructed a beamline BL36XU at the 8 GeV synchrotron radiation facility SPring‐8 to provide information required for the development of next‐generation polymer electrolyte fuel cells (PEFCs) by clarifying the dynamic aspects of structures and electronic states of cathode catalysts under PEFC operating conditions and in the deterioration processes by accelerated durability test protcols. To investigate the mechanism and degradation process for the cathode electrocatalysis in practical PEFCs, we developed advanced time‐ and spatially‐resolved in‐situ/operando X‐ray absorption fine structure measurement systems and complementary analytical systems (X‐ray emission spectroscopy (XES), X‐ray diffraction (XRD), X‐ray computer tomography (CT) and hard X‐ray photoelectron spectroscopy (HAXPES)) and combined them to develop multi‐analytical systems at BL36XU. Multi‐analytical systems are very powerful for observing spatial‐temporal features of the transient processes occurring in complex systems such as PEFCs. This account describes the design, performance, and research results of the BL36XU and multi‐analytical in‐situ/operando systems.     

Separation of uranium(vi) by liquid-solid extraction with tri-n-octylphosphine oxide diluted with naphthalene

Liquid-liquid distribution with tri-n-octylphosphine oxide (TOPO)and molten naphthalene has been investigated for the extraction of 20 metals from nitric acid and hydrochloric acid solutions. Uranium is quantitatively extracted from 1 M nitric acid or hydrochloric acid by using 100 mg of TOPO and 200 mg of naphthalene and shaking for 5 min at 80°C, and separated from transition metals, alkaline earth metals and rare earth metals (except scandium). Addition of naphthalene increases the extraction efficiency.     

Scattering of traveling spots in dissipative systems

One of the fundamental questions for self-organization in pattern formation is how spatial periodic structure is spontaneously formed starting from a localized fluctuation. It is known in dissipative systems that splitting dynamics is one of the driving forces to create many particle-like patterns from a single seed. On the way to final state there occur many collisions among them and its scattering manner is crucial to predict whether periodic structure is realized or not. We focus on the colliding dynamics of traveling spots arising in a three-component system and study how the transition of scattering dynamics is brought about. It has been clarified that hidden unstable patterns called "scattors" and their stable and unstable manifolds direct the traffic flow of orbits before and after collisions. The collision process in general can be decomposed into several steps and each step is controlled by such a scattor, in other words, a network among scattors forms the backbone for scattering dynamics. A variety of input-output relations comes from the complexity of the network as well as high Morse indices of the scattor. The change of transition manners is caused by the switching of the network from one structure to another, and such a change is caused by the singularities of scattors. We illustrate a typical example of the change of transition caused by the destabilization of the scattor. A new instability of the scattor brings a new destination for the orbit resulting in a new input-output relation, for instance, Hopf instability for the scattor of peanut type brings an annihilation.