High-order harmonic generation by an ultrafast infrared pulse

Life science and biology have advanced with the progress of microscope technology. A strong desire of life scientists is to observe living cells with high spatial resolution. The development of soft x-ray microscopy using a special wavelength called the water window started in the 1970s in order to fulfill this desire. However, the photon fluxes realized so far are still insufficient for this application. Here, we review our work on a coherent water window x-ray generation based on high-order harmonics driven by an infrared pulse. Our proposed generation scheme, combining an infrared laser driver and a neutral gas medium, is efficient and scalable in output yields of the water window x-ray.     

Effect of Alkynyl Group on Reactivity in Photoaffinity Labeling with 2-Thienyl-Substituted α-Ketoamide

Minimalist photo-reactive probes, which consist of a photo-reactive group and a tag for detection of target proteins, are useful tools in chemical biology. Although several diazirine-based and aryl azide-based minimalist probes are available, no keto-based minimalist probe has yet been reported. Here we describe minimalist probes based on a 2-thienyl-substituted α-ketoamide bearing an alkyne group on the thiophene ring. The 3-alkyne probe showed the highest photo-affinity labeling efficiency.     

Formation of an Azaruthenacyclopentadiene Skeleton via Ammonia Activation by an Electron-Deficient Ru3 Cluster

A dicationic triruthenium complex containing a μ₃-η³-C₃ ring, [(Cp*Ru)₃(μ₃-η³-C₃MeH₂−)(μ₃-CH)(μ-H)]²⁺ ( 1 a , Cp*=η⁵-C₅Me₅), reacted with ammonia to yield a μ-amido complex, [(Cp*Ru)₃(μ₃-η³-CHCMeCH) (μ₃-CH)(μ-NH₂)]²⁺ ( 5 ), via N−H bond scission. Subsequent treatment with base resulted in C−N bond formation to yield a μ₃-η²:η²-1-azabutadien-4-yl complex, [(Cp*Ru)₃(μ₃-CH)(μ₃-η²:η²-NH=CH−CMe=CH−)]⁺ ( 6 a ). The azaruthenacyclopentadiene skeleton was alternatively synthesized by the photolysis of mono-cationic complex [(Cp*Ru)₃(μ₃-η³-C₃RH₂−)(μ₃-CH)]⁺ ( 2 a ; R=Me, 2 b ; R=H) in the presence of ammonia. The C₃ ring skeleton was broken via the electron transfer to the π*(C−C) orbital in the C₃ ring, and a transiently generated unsaturated μ₃-allylic species can take up ammonia, resulting in N−H bond scission followed by C−N bond formation.     

Labile Base-Stabilized Silyliumylidene Ions. Non-Metallic Species Capable of Activating Multiple Small Molecules

Several base-stabilized silyliumylidene ions ( 2 and 3 ) with different ligands were synthesized. Their behaviour appeared strongly dependent on the nature of ligand. Indeed, in contrast to the poorly reactive silyliumylidene ions 3 c,d stabilized by strongly donating ligands (DMAP, NHC), the silylene- and sulfide-supported one ( 2-H and 3 a ) exhibits higher reactivity toward various small molecules. Furthermore, their capability to successively activate multiple small molecules was clearly demonstrated by processes involving successive reactions with silane/formamide, CO₂ and H₂. Moreover, HBPin adduct of 3 a ( 8-C ) catalyzes the hydroboration of pyridine. Of particular interest, silylene-supported silyliumylidene complex 2-H is one of the rare species able to activate two H₂ molecules.     

Effects of Roxadustat on Erythropoietin Production in the Rat Body

Anemia is a major complication of chronic renal failure. To treat this anemia, prolylhydroxylase domain enzyme (PHD) inhibitors as well as erythropoiesis-stimulating agents (ESAs) have been used. Although PHD inhibitors rapidly stimulate erythropoietin (Epo) production, the precise sites of Epo production following the administration of these drugs have not been identified. We developed a novel method for the detection of the Epo protein that employs deglycosylation-coupled Western blotting. With protein deglycosylation, tissue Epo contents can be quantified over an extremely wide range. Using this method, we examined the effects of the PHD inhibitor, Roxadustat (ROX), and severe hypoxia on Epo production in various tissues in rats. We observed that ROX increased Epo mRNA expression in both the kidneys and liver. However, Epo protein was detected in the kidneys but not in the liver. Epo protein was also detected in the salivary glands, spleen, epididymis and ovaries. However, both PHD inhibitors (ROX) and severe hypoxia increased the Epo protein abundance only in the kidneys. These data show that, while Epo is produced in many tissues, PHD inhibitors as well as severe hypoxia regulate Epo production only in the kidneys.     

Unravelling the Helianthus tuberosus L. (Jerusalem Artichoke,Kiku-Imo) Tuber Proteome by Label-Free Quantitative Proteomics

The present research investigates the tuber proteome of the ‘medicinal’ plant Jerusalem artichoke (abbreviated as JA) (Helianthus tuberosus L.) using a high-throughput proteomics technique. Although JA has been historically known to the Native Americans, it was introduced to Europe in the late 19th century and later spread to Japan (referred to as ‘kiku-imo’) as a folk remedy for diabetes. Genboku Takahashi research group has been working on the cultivation and utilization of kiku-imo tuber as a traditional/alternative medicine in daily life and researched on the lowering of blood sugar level, HbA1c, etc., in human subjects (unpublished data). Understanding the protein components of the tuber may shed light on its healing properties, especially related to diabetes. Using three commercially processed JA tuber products (dried powder and dried chips) we performed total protein extraction on the powdered samples using a label-free quantitate proteomic approach (mass spectrometry) and catalogued for the first time a comprehensive protein list for the JA tuber. A total of 2967 protein groups were identified, statistically analyzed, and further categorized into different protein classes using bioinformatics techniques. We discussed the association of these proteins to health and disease regulatory metabolism. Data are available via ProteomeXchange with identifier PXD030744.     

Determination of iodine in organic iodine compounds by non-equilibrium isotope exchange in a heterogeneous exchange system

Some water-soluble organic iodine compounds (aqueous solution) can be analyzed for iodine by isotopically exchanging with labelled elementary iodine (organic solution). The method is applicable to exchange systems in which the rate of the exchange is rather small but measurable, before the exchange equilibrium is attained. The iodine content of iodoaromatic amino acids such as 5-iodouracil and 3,5-diiodotyrosine can be determined within an error of ±4%.     

Aminyl radical cyclization by means of anodic oxidation. Stereoselective synthesis of cis-1-methyl-2,5-disubstituted pyrrolidines

Neutral aminyl radicals generated by anodic oxidation of lithium alkenylamides 2 undergo a stereoselective cyclization to give $\text{cis}$-1-methyl-2,5-disubstituted pyrrolidines 4. Their $\text{cis}$ stereochemistry was confirmed by a comparison with $\text{trans}$-1,2-dimethyl-5-phenylpyrrolidine, the structure of which was established by X-ray crystallographic analysis of its quarternary ammonium bromide 6.     

1,4-cycloheptylene and the related allylic diradicals. Thermal nitrogen extrusion from 6,7-diazabicyclo[3.2.2]Non-6-enes

Thermal nitrogen extrusion of 2-methylene-6,7-diazabicyclo[3.2.2]non-6-enes and 6,7- diazabicyclo[3.2.2]nona-2,6-diene,6 proceeded easily to give closure and cleavage products $\text{via}$ the corresponding 5-methylene-1,4-cycloheptylenes and 4-cyclohepten-1,3-ylenes, respectively.