An expedient synthesis of the fibril binding compound FSB via sequential Pd-catalyzed coupling reactions

The styryl benzene derivative (E, E)-1-fluoro-2,5-bis(3-hydroxycarbonyl-4-hydroxy)styrylbenzene (FSB), well-known for its binding to beta-amyloid peptide fibrils, was synthesized in an efficient manner exploiting two sequential palladium(0)-catalyzed coupling reactions in a 34% overall yield. This is a substantial improvement to the previously reported synthesis of FSB in 1.1%.     

Chemical constituents from the leaves of Manglietia phuthoensis and their effects on osteoblastic MC3T3-E1 cells

Two new phenyl glycosides, mangliesides A and B (1, 2), a new ionol glycoside, manglieside C (3), two new lignan glycosides, mangliesides D and E (4, 5), were isolated from the leaves of Manglietia phuthoensis, along with two known lignans, 3-methoxymagnolol (6) and obovatol (7). Their structures were established by means of 1D and 2D NMR, electrospray ionization (ESI)-MS and HR-ESI-MS experiments. Among them, compounds 2 and 5 significantly (p<0.05) increased the growth and differentiation of osteoblastic MC3T3-E1 cells in vitro.     

Cross metathesis of alpha-methylene lactones II: gamma- and delta-lactones

[reaction: see text] The cross metathesis reactivities of alpha-methylene-gamma-butyrolactone and an alpha-methylene-delta-lactone have been investigated. alpha-Methylene-gamma-butyrolactone undergoes rapid and efficient olefin isomerization in the presence of second-generation metathesis catalysts. However, cross metathesis can be achieved with the additive 2,6-dichlorobenzoquinone. In contrast, the alpha-methylene-delta-lactone neither isomerizes nor couples under similar conditions.     

The Antiproliferative and Apoptosis-Inducing Effects of the Red Macroalgae Gelidium latifolium Extract against Melanoma Cells

The red macroalga Gelidium latifolium is widely distributed in the coastal areas of Indonesia. However, current knowledge on its potential biological activities is still limited. In this study, we investigated the potential bioactive compounds in Gelidium latifolium ethanol extract (GLE), and its cytotoxic effects against the murine B16-F10 melanoma cell line. GLE shows high total phenolic content (107.06 ± 17.42 mg GAE/g) and total flavonoid content (151.77 ± 3.45 mg QE/g), which potentially contribute to its potential antioxidant activity (DPPH = 650.42 ± 2.01 µg/mL; ABTS = 557.01 ± 1.94 µg/mL). ESI-HR-TOF-MS analysis revealed large absorption in the [M-H]^- of 327.2339 m/z, corresponding to the monoisotopic molecular mass of brassicolene. The presence of this compound potentially contributes to GLE’s cytotoxic activity (IC₅₀ = 84.29 ± 1.93 µg/mL). Furthermore, GLE significantly increased the number of apoptotic cells (66.83 ± 3.06%) compared to controls (18.83 ± 3.76%). Apoptosis was also confirmed by changes in the expression levels of apoptosis-related genes (i.e., p53, Bax, Bak, and Bcl2). Downregulated expression of Bcl2 indicates an intrinsic apoptotic pathway. Current results suggest that components of Gelidium latifolium should be further investigated as possible sources of novel antitumor drugs.     

Fast simplicial quadrature-based finite element operators using Bernstein polynomials

We derive low-complexity matrix-free finite element algorithms for simplicial Bernstein polynomials on simplices. Our techniques, based on a sparse representation of differentiation and special block structure in the matrices evaluating B-form polynomials at warped Gauss points, apply to variable coefficient problems as well as constant coefficient ones, thus extending our results in Kirby (Numer Math, 2011, in press).     

Optimal pairwise and non-pairwise alchemical pathways for free energy calculations of molecular transformation in solution phase

We estimate the global minimum variance path for computing the free energy insertion into or deletion of small molecules from a dense fluid. We perform this optimization over all pair potentials, irrespective of functional form, using functional optimization with a two-body approximation for the radial distribution function. Surprisingly, the optimal pairwise path obtained via this method is almost identical to the path obtained using a optimized generalized "soft core" potential reported by Pham and Shirts [J. Chem. Phys. 135, 034114 (2011)]. We also derive the lowest variance non-pairwise potential path for molecular insertion or deletion and compare its efficiency to the pairwise path. Under certain conditions, non-pairwise pathways can reduce the total variance by up to 60% compared to optimal pairwise pathways. However, optimal non-pairwise pathways do not appear generally feasible for practical free energy calculations because an accurate estimate of the free energy, the parameter that is itself is desired, is required for constructing this non-pairwise path. Additionally, simulations at most intermediate states of these non-pairwise paths have significantly longer correlation times, often exceeding standard simulation lengths for solvation of bulky molecules. The findings suggest that the previously obtained soft core pathway is the lowest variance pathway for molecular insertion or deletion in practice. The findings also demonstrate the utility of functional optimization for determining the efficiency of thermodynamic processes performed with molecular simulation.     

On Grushin’s equation

The paper deals with nonlinear problems for equations of Grushin type. We prove some nonexistence results via Pokhozhaev’s identity. In the rest of the paper we prove some results on smoothness near the boundary of eigenfunctions by using an explicit formula for fundamental solutions and the Kelvin transform for the operator.     

On the energy landscapes of 3-indole acetic acid and 3-indole propionic acid. A study of side chain flexibilities in their S(0) and S(1) electronic states

The tandem of 3-indole acetic acid (IAA) and 3-indole propionic acid (IPA) is ideally suited for a detailed study of the intramolecular forces responsible for the conformational properties of species containing side chains. Toward this end, high resolution S(1)<-- S(0) excitation spectra of the three origin bands in IAA and the two origin bands in IPA were recorded and analyzed. Each origin is assigned to a unique conformer. A discussion of the resulting energy landscape is given.