Solvent‐free Liquid Crystals and Liquids from DNA

As DNA exhibits persistent structures with dimensions that exceed the range of their intermolecular forces, solid‐state DNA undergoes thermal degradation at elevated temperatures. Therefore, the realization of solvent‐free DNA fluids, including liquid crystals and liquids, still remains a significant challenge. To address this intriguing issue, we demonstrate that combining DNA with suitable cationic surfactants, followed by dehydration, can be a simple generic scheme for producing these solvent‐free DNA fluid systems. In the anhydrous smectic liquid crystalline phase, DNA sublayers are intercalated between aliphatic hydrocarbon sublayers. The lengths of the DNA and surfactant are found to be extremely important in tuning the physical properties of the fluids. Stable liquid‐crystalline and liquid phases are obtained in the ?20 °C to 200 °C temperature range without thermal degradation of the DNA. Thus, a new type of DNA‐based soft biomaterial has been achieved, which will promote the study and application of DNA in a much broader context.     

Scanning electrochemical microscopy in the 21st century. Update 1: Five years after

This Perspective is an update to our more extensive survey of scanning electrochemical microscopy (SECM) published in 2007. During this time, the SECM field retained its momentum by expanding into new areas and meeting the emerging scientific and technological challenges. Here we focus on most prominent developments such as high-resolution imaging, investigation of structures and processes on the nanoscale, alternative energy applications, and new approaches to solving "real world" problems. The fabrication of novel SECM probes and related theoretical advances are also discussed.     

Structurally tailored carbon xerogels produced through a sol–gel process in a water–methanol–inorganic salt solution

The impact of solvent composition as well as inorganic salt content and type on carbon xerogel structure was investigated. Carbon xerogels were derived from the sol–gel polycondensation of resorcinol with furfural in a water–methanol–inorganic salt solution. As inorganic salts, NaCl, NH₄ClO₄ and FeCl₃ were used. In order to conduct an accurate examination of the carbon xerogel structures and textures, inorganic salts were removed prior to carbonization. The xerogel structures can be tailored according to the water/methanol ratio and, to a lesser extent, according to the inorganic salt content and type in the starting solution. As a result, a significant amount of salt can be introduced to the gel network of the desired structure. The morphology and physical properties of the organic xerogels, carbon xerogels and their composites were characterized by means of SEM, N₂ sorption and XRD. It was found that samples derived from mixtures with FeCl₃ manifest well developed mesoporosity and depleated microporosity in comparison to samples prepared from mixtures with NaCl and NH₄ClO₄. Iron ions chemically bond to the xerogel matrix and cause its partial graphitization during the carbonization process, resulting in enhanced mesoporosity.     

Retention of configuration in the action of human plasma 3'-exonuclease on oligo(deoxynucleoside phosphorothioate). A new method for assignment of absolute configuration at phosphorus in isotopomeric deoxyadenosine 5'-O-[(18)O]phosphorothioate

A new method of analysis has allowed the exonucleolytic cleavage by human 3'-exonuclease to be determined. Hydrolysis by human plasma 3'-exonuclease proceeds with retention of configuration at phosphorus. The new method determines the sense of chirality at phosphorus in isotopomeric adenosine 5'-O-[(18)O]phosphorothioates. This is based on stereospecific two-step conversion of the mono-thionucleotide into the corresponding deoxyadenosine 5'-O-alpha-[(18)O]thiotriphosphate, followed by the use of terminal deoxyribonucleotidyl transferase and MALDI TOF mass spectrometry of the resulting elongated primer. Retention of configuration in the reaction of plasma 3'-exonuclease implies a two-step mechanism with two displacements on phosphorus. Inversion at each step leads to overall retention.     

Secondary deuterium kinetic isotope effects in irreversible additions of allyl reagents to benzaldehyde

The competitive kinetics of additions of allyl to benzaldehyde-h and -d from allyltributyl tin, from diisopropyltartrylallyl boronate, and from allyl bromide and zinc dust in aqueous tetrahydrofuran have inverse secondary deuterium kinetic isotope effects, SDKIEs. These inverse SDKIEs are in contrast to the normal SDKIEs that were obtained with allyl lithium and allyl Grignard, suggesting rate-determining single-electron transfer in these cases. By various MO calculations the transition state for addition of allyl boronate occurs with substantial B-O bond formation and little C-C bond formation. The magnitudes of the SDKIEs with the other two allylating reagents, when compared with reasonable equilibrium isotope effects for the addition, suggest transition states with substantial C-C bond formation.     

Molecular clusters in aqueous solutions of pyridine and its methyl derivatives

Small-angle neutron scattering proved that molecules in aqueous solutions of pyridine, 2-methylpyridine and 2,6-dimethylpyridine form clusters. The clusters are dynamic aggregates consisting of hydrogen-bonded water-amine complexes. Strengthening of the hydrogen bonds between water and amine molecules due to the methyl groups in the ortho position in the pyridine ring makes the structures more stable, as was evidenced by relatively long times of the structural relaxation. The strong intermolecular forces affect the thermal expansion of the systems. No aggregates similar to those in aqueous systems are present in the methanolic ones. That points to the crucial role of water in the molecular clustering. A molecule of methanol, although capable of hydrogen bonding with the amines, cannot participate in larger structures because of the lack of protons that could form the enhanced network. Thus, even if the amine-methanol complexes occur, they are incapable of further association. It was shown that the co-operative nature of hydrogen bonds and the propensity of water to association are the main factors that determine the properties of aqueous systems.