Fast Photochemical Oxidation of Proteins (FPOP) Maps the Epitope of EGFR Binding to Adnectin

Epitope mapping is an important tool for the development of monoclonal antibodies, mAbs, as therapeutic drugs. Recently, a class of therapeutic mAb alternatives, adnectins, has been developed as targeted biologics. They are derived from the 10th type III domain of human fibronectin (¹⁰Fn3). A common approach to map the epitope binding of these therapeutic proteins to their binding partners is X-ray crystallography. Although the crystal structure is known for Adnectin 1 binding to human epidermal growth factor receptor (EGFR), we seek to determine complementary binding in solution and to test the efficacy of footprinting for this purpose. As a relatively new tool in structural biology and complementary to X-ray crystallography, protein footprinting coupled with mass spectrometry is promising for protein–protein interaction studies. We report here the use of fast photochemical oxidation of proteins (FPOP) coupled with MS to map the epitope of EGFR-Adnectin 1 at both the peptide and amino-acid residue levels. The data correlate well with the previously determined epitopes from the crystal structure and are consistent with HDX MS data, which are presented in an accompanying paper. The FPOP-determined binding interface involves various amino-acid and peptide regions near the N terminus of EGFR. The outcome adds credibility to oxidative labeling by FPOP for epitope mapping and motivates more applications in the therapeutic protein area as a stand-alone method or in conjunction with X-ray crystallography, NMR, site-directed mutagenesis, and other orthogonal methods. Figure

?     

miR-98 suppresses melanoma metastasis through a negative feedback loop with its target gene IL-6

Dysregulated microRNA (miRNA) expression has a critical role in tumor development and metastasis. However, the mechanism by which miRNAs control melanoma metastasis is unknown. Here, we report reduced miR-98 expression in melanoma tissues with increasing tumor stage as well as metastasis; its expression is also negatively associated with melanoma patient survival. Furthermore, we demonstrate that miR-98 inhibits melanoma cell migration in vitro as well as metastatic tumor size in vivo. We also found that IL-6 is a target gene of miR-98, and IL-6 represses miR-98 levels via the Stat3-NF-κB-lin28B pathway. In an in vivo melanoma model, we demonstrate that miR-98 reduces melanoma metastasis and increases survival in part by reducing IL-6 levels; it also decreases Stat3 and p65 phosphorylation as well as lin28B mRNA levels. These results suggest that miR-98 inhibits melanoma metastasis in part through a novel miR-98-IL-6-negative feedback loop.     

Synthesis of Cu vanadate nanorods for visible‐light photocatalytic degradation of gentian violet

Cu vanadate nanorods have been synthesized via the hydrothermal process using polymer polyvinyl pyrrolidone (PVP) as the surfactant. X‐ray diffraction (XRD) shows that the nanorods are composed of monoclinic Cu₅V₂O₁₀ phase. Scanning electron microscopy (SEM) observation shows that the diameter and length of the nanorods are 50–300 nm and 3 μm, respectively. PVP concentration, hydrothermal temperature and duration time play essential roles in the formation and sizes of the Cu vanadate nanorods. A PVP‐assisted nucleation and crystal‐growth process is proposed to explain the formation of the Cu vanadate nanorods. Gentian violet (GV) is used to evaluate the photocatalytic activities of the Cu vanadate nanorods under solar light. The GV concentration clearly decreases with increasing irradiation time, and content of the Cu vanadate nanorods. GV solution with the concentration of 10 mg L⁻¹ can be totally degraded under solar light irradiation for 4 h using 10 mg Cu vanadate nanorods. The Cu vanadate nanorods have good photocatalytic activities for the degradation of GV under solar light.     

Electrospinning synthesis and photocatalytic property of CaFe2O4/MgFe2O4 heterostructure for degradation of tetracycline

CaFe₂O₄/MgFe₂O₄ nanowires with heterostructure had been successfully synthesized by electrospinning method. The obtained samples were systematically characterized by scanning electron microscopy (SEM), X‐Ray diffraction (XRD), UV–Vis diffuse reflectance spectra (UV‐Vis DR) and Environment scanning electron microscopy (ESEM). The novel CaFe₂O₄/MgFe₂O₄ nanowires exhibit an enhanced photocatalytic activity for degrading of tetracycline (TC) under visible light. Compared with bare CaFe₂O₄ or MgFe₂O₄ samples, the prepared CaFe₂O₄/MgFe₂O₄ (Ca:Mg:Fe = 3:2:10) composited nanowires show the best photocatalytic performance with a degradation efficiency of 40% after 150 min reaction time. This enhancement is attributed to the heterostructure of CaFe₂O₄/MgFe₂O₄ nanowires, which effectively repress the recombination of photo‐generated electrons and holes. Based on heterostructure and energy band positions, the enhancement of mechanism under visible‐light enhances the photocatalytic activity.     

The influence of silicone shell on double-layered microcapsules in intumescent flame-retardant natural rubber composites

The mechanisms of the thermal degradation of polyhedral oligomeric octaphenylsilsesquioxane (OPS), octa(nitrophenyl)silsesquioxane (ONPS), and octa(aminophenyl)silsesquioxane (OAPS) were investigated. The –NO₂ or –NH₂ substituents on the phenyl group affected the mechanism of the POSS thermal degradation. The thermal stabilities of OPS, ONPS, and OAPS were characterized by TG and FTIR. Thermal degradation of OPS included mainly the degradation of caged polyhedral oligomeric silsesquioxane structures and phenyl groups. Nitro or amino substituents decreased its thermal stability. The thermal degradation processes of OPS, ONPS, and OAPS differed. Phenyl groups and cyclobutadiene were observed in the OPS degradation products. Oxygen radicals that caused intensive CO₂ release between 350 and 450 °C were generated by the degradation of ONPS –NO₂. OAPS released mainly aminophenyl groups at 370 °C, whereas a small number of phenyl groups decomposed at 500 °C. The OAPS reactivity could enhance the thermal stability of POSS structure in the polyimide OAPS composites.     

Synthesis of polyaniline/Au composite nanotubes and their high performance in the detection of NADH

Polyaniline (PANI)/Au composite nanotubes were synthesized and developed as an electrode material for a nicotinamide adenine dinucleotide (NADH) sensor. A MnO₂ self-degradable template method was used to prepare the tube-like PANI nanomaterial. By introducing PANI nanotubes into Au colloid, Au nanoparticles (NPs) were successfully decorated onto the surface of PANI nanotubes through electrostatic effects. The morphology, composition, and optical properties of the resulting products were characterized by transmission electron microscopy (TEM), X-ray diffraction (XRD), Fourier transform infrared (FTIR) spectroscopy, ultraviolet-visible (UV-vis) absorption spectra, and thermogravimetric analysis (TGA). In addition, the obtained PANI/Au composites were used as catalysts for the electrochemical oxidation of NADH. Cyclic voltammogram (CV) experiments indicated that PANI/Au-modified glassy carbon electrode showed a higher electrocatalytic activity towards the oxidation of NADH in a neutral environment. Differential pulse voltammogram (DPV) results illustrated that the fabricated NADH sensor had excellent anti-interference ability and displayed a wide linear range from 4?×?10^?4 to 8?×?10^?3 M with a detection limit of 0.5?×?10^?7 M.     

Asymmetric NH Insertion of Secondary and Primary Anilines under the Catalysis of Palladium and Chiral Guanidine Derivatives

Efficient enantioselective N? H insertion reactions of secondary and primary anilines were catalyzed by palladium(0) in combination with chiral guanidine derivatives. A broad range of substituted anilines were tolerated, and the corresponding products were obtained in high yield (up to 99 %) with good enantioselectivity (up to 94 % ee) under mild reaction conditions. The N? H insertion mechanism was examined by the study of kinetic isotope effects, control experiments, HRMS, and spectroscopic analysis.     

Transition from π Radicals to σ Radicals: Substituent‐Tuned Cyclization of Hydrazonyl Radicals

Hydrazonyl radicals are known for their π‐electronic structures; however, their σ‐electronic structures have not been reported as yet. Herein, we show that readily accessible β,γ‐ and γ,δ‐unsaturated N‐trichloroacetyl and N‐trifluoroacetyl hydrazones can be conveniently converted into hydrazonyl σ radicals, which subsequently undergo 5‐exo‐trig radical cyclization at the N¹ or N² atom to form pyrazolines and azomethine imines, respectively.