Ambient Solar Radiation-Induced Photodamage in Marine Bacterioplankton

Abstract— There has been much recent concern about the effects of increased UV radiation at certain locations on the earth's surface. There have been extensive studies of ultraviolet radiation effects on phytoplankton and primary production, yet the effects of UVB upon bacterioplankton have been largely overlooked. Bacteria play a central role in the cycling of nutrients and energy flow to higher trophic levels, serving as both mineralizers and secondary producers that are consumed by higher organisms. We have begun to investigate the induction of DNA photodamage by UVB in marine planktonic communities using a highly specific radioimmunoassay to measure cyclobutane pyrimidine dimers in samples collected from the northern Gulf of Mexico. DNA damage in the bacterioplankton size-fraction (< 0.8 μ.m) was greater than in the larger eukaryotic size fraction (>0.8 μm <120 μm) in 9 of 10 samples. Diel patterns of dimer accumulation and repair were observed in surface waters over a 48 h period in the bacterioplankton size fraction and in the larger eukaryotic plankton size fraction. Depth profiles of DNA damage in the bacterioplankton size fraction appear to be dependent on surface water mixing. Damage was greatest in surface waters, decreased with depth and could be detected to 10 m in calm seas. No net accumulation of damage was observed in moderate seas, even at the surface. Solar radiation was found to inhibit significantly both ³H-thymidine and ¹⁴C-leucine incorporation. Ultraviolet B was responsible for approximately half of the total inhibition of ³H-thymidine incorporation, UVA contributing the other half of the inhibition. The vast majority of ¹⁴C-leucine incorporation inhibition was due to UVB, suggesting that protein synthesis is less affected by UVA. The results demonstrate that direct measures of DNA damage can be made of indigenous planktonic communities and that bacterioplankton are highly susceptible to UVB damage and may serve as a more sensitive indicator of UVR stress than other microorganisms.     

Direct determination of pentachlorophenol by differential pulse polarography

Differential pulse polarography at the dropping mercury electrode and differential pulse voltammetry at the carbon paste electrode are used for direct determinations of pentachlorophenol at concentrations down to 0.27 ppm. PCP is electrochemically reduced in phosphate buffers of pH 8 to produce a concentration-dependent current peak at —0.8 V vs. Ag/AgCl. The procedure requires only 15 min. Cyclic voltammetry at the hanging mercury drop electrode is used to evaluate the electrochemical reaction and to establish the reversibility of the PCP electrode reaction.     

Spectrochemical investigations in molecularly organized solvent media: evaluation of pyridinium chloride as a selective fluorescence quenching agent of polycyclic aromatic hydrocarbons in aqueous carboxylate-terminated poly(amido) amine dendrimers and anionic micelles

The ability of pyridinium chloride (PC) to selectively quench alternant as opposed to nonaltemant polycyclic aromatic hydrocarbons (PAHs) in organized media is examined. PC was previously shown to be a selective quenching agent of alternant PAHs in neat polar solvents. Carboxylate-terminated poly(amido) amine (PAMAM-CT) dendrimers and anionic surfactants--sodium dodecanoate (SD), sodium octanoate (SO), and sodium dodecylsulfate (SDS)--were chosen as the solubilizing media for this study. Selective quenching of alternant PAHs is observed in the presence of the SDS and SO micelles. However, the extent of PAH quenching in SO is significantly reduced compared to PAHs dissolved in either water or SDS micelles. In the case of the smaller generation 4.5 (G4.5) PAMAM-CT dendrimers, PC was prevented from quenching both alternant and nonalternant PAHs to any appreciable extent. The dendrimer is able to "protect" the PAHs from the PC quencher that resides at the dendrimer surface. Both, SD and G5.5 PAMAM-CT precipitated out of solution with the addition of PC. Differences between traditional micelles and "unimolecular micelle" dendrimers were also examined. These studies further confirm that the PAHs did not reside in the "analogous" palisade region of the dendrimers as they do in micelles. The PAHs must reside in the outermost branches of the dendrimer, but sufficiently far enough away from the charged surface groups, where PC associated, to prevent fluorescence quenching. This work further illustrates the differences between "unimolecular micelle" dendrimers and traditional micelles.     

Transition metal ion complexes of thiosemicarbazones derived from 2-acetylpyridine. Part 5. The4 N-cyclohexyl derivative

Summary Metal ion complexes of the thiosemicarbazone,⁴ N-cyclohexyl-2-[1-(2-pyridinyl)ethylidene]hydrazinecarbothioamide (HL4CH), have been prepared and spectrally characterised. Both the size of the cyclohexyl-group attached at⁴N as well as the⁴N hydrogen affect the stoichiometry and stereochemistry of the isolated complexes. The large cyclohexyl-group evidently causes the isolation of [Fe(HL4CH) (L4CH)H₂O](ClO₄) instead of the expected [Fe(L4CH)₂]ClO₄[Co(L4CH)Br] instead of [Co(HL4CH)Br₂], and [Ni(L4CH)Br] instead of [Ni(HL4CH)₂Br₂]. The presence of the hydrogen at⁴N presumably hinders the deprotonation of HL4CH on complex formation since [Cu(HL4CH)Cl₂] was isolated rather than [CuLCl], which occurs when the thiosemicarbazone has⁴N with two alkyl groups or incorporated in a ring. Further, although we prepared [Ni(L4CH)Br], complexes of this stoichiometry are planar and diamagnetle when⁴N does not have a hydrogen(s) attached to it rather than tetrahedral and paramagnetic as has been found for the present complex.     

Reversible pyranyl complex formation and the mechanism of rearrangement to (η-6-oxocycloheptadienyl)Mn(CO)3 complexes in the reaction of β-cyclomanganated 1,5-diarylpenta-1,4-dien-3-ones and alkynes; the crystal structure of [2,4-diphenyl-6-(2-phenylethenyl)pyranyl-η]tricarbonylmanganese

[1-Phenyl-2-[(E)-3-phenylprop-2-en-1-oyl-κO]ethenyl-κC¹]tetracarbonylmanganese (1a) reacts with PhCCH in CCl₄ at room temperature to form [2,4-diphenyl-6-(2-phenylethenyl)pyranyl-η⁵]tricarbonylmanganese (2a), whose X-ray crystal structure is reported to complement that of its isomer [6-oxo-2,4,7-triphenylcyclohepta-1,4-dienyl-1,2,3,4,5-η]tricarbonylmanganese (3a), previously obtained from the reaction under reflux; but for 1a and PhCCPh the pyranyl complex cannot be isolated before rearrangement to the 3a analogue occurs. More forcing reaction conditions for 1a with Me₃SiCCH and for [1-(2-trifluoromethylphenyl)-2-[(E)-3-(2-trifluoromethylphenyl)prop-2-en-1-oyl-κO]ethenyl-κC¹]tetracarbonylmanganese (1b) with Me₃SiCCH and PhCCH give new analogues of 3a where previously only 2a analogues had been isolated.The reaction in CCl₄ under reflux of PhCCH and the β-deuterio analogue of 1a, [1-phenyl-2-[(E)-3-phenylprop-2-en-1-oyl-3d-κO]ethenyl-κC¹]tetracarbonylmanganese, gave deuteriated 3a with exo-D at the α-carbon, C7. This is inconsistent with the Mn-mediated Ph migration mechanism originally proposed to accommodate the endo position of Ph in 3a, and instead it implicates a cyclopropyl carbonyl-addition intermediate or a cyclopropyl acyl-substitution transition state in the key rearrangement step for 2a → 3a.     

An enantioselective synthesis of (S)-(+)-3-aminomethyl-5-methylhexanoic acid via asymmetric hydrogenation

A concise enantioselective synthesis of (S)-(+)-3-aminomethyl-5-methylhexanoic acid (1, Pregabalin) has been developed. The key step is the asymmetric hydrogenation of a 3-cyano-5-methylhex-3-enoic acid salt 2 with a rhodium Me-DuPHOS catalyst, providing the desired (S)-3-cyano-5-methylhexanoate 3 in very high ee. Subsequent hydrogenation of the nitrile 3 with a heterogeneous nickel catalyst provides Pregabalin 1 in excellent overall yield and purity.     

Spectroscopic and computational studies of the de novo designed protein DF2t: correlation to the biferrous active site of ribonucleotide reductase and factors that affect O2 reactivity

DF2t, a de novo designed protein that mimics the active-site structure of many non-heme biferrous enzymes, has been studied using a combination of circular dichroism (CD), magnetic circular dichroism (MCD), and variable-temperature variable-field (VTVH) MCD. The active site of DF2t is found to have one five-coordinate iron and one four-coordinate iron, which are weakly antiferromagnetically coupled through a mu-1,3 carboxylate bridge. These results bear a strong resemblance to the spectra of Escherichia coli ribonucleotide reductase (R2), and density functional theory calculations were conducted on the W48F/D84E R2 mutant in order to determine the energetics of formation of a monodentate end-on-bound O2 to one iron in the binuclear site. The mu-1,3 carboxylate bridges found in O2-activating enzymes lack efficient superexchange pathways for the second electron transfer (i.e., the OH/oxo bridge in hemerythrin), and simulations of the binding of O2 in a monodentate end-on manner revealed that the bridging carboxylate ligands do not appear capable of transferring an electron to O2 from the remote Fe. Comparison of the results from previous studies of the mu-1,2 biferric-peroxo structure, which bridges both irons, finds that the end-on superoxide mixed-valent species is considerably higher in energy than the bridging peroxo-diferric species. Thus, one of the differences between O2-activating and O2-binding proteins appears to be the ability of O2 to bridge both Fe centers to generate a peroxo intermediate capable of further reactivity.     

Simplex optimization of conditions for the determination of arsenic in environmental samples by using electrothermal atomic absorption spectrometry

Simplex optimization was used to efficiently delineate the optimum experimental conditions to be used for the electrothermal atomic absorption spectrometric analysis of arsenic in a standard reference material of marine origin. Four experimental variables, were considered: ashing temperature, atomization temperature, modifier concentration, and atomization ramping time. This combination of methods and materials provides a powerful means of rapidly improving the experimental conditions used for analysis of arsenic in a wide variety of samples of environmental origin. Excellent recoveries of arsenic were obtained when using the optimum electrothermal atomic absorption spectrometry conditions to analyze standard solutions of arsenobetaine, arsenocholine and tetramethylarsonium iodide.