The use of genetic typing methods to discriminate among strains of Vibrio cholerae, V. parahaemolyticus, and V. vulnificus

This review article summarizes the findings of recent typing studies conducted on Vibrio cholerae, V. parahaemolyticus, and V. vulnificus. The DNA-based methods used to type the Vibrio spp. include whole genome approaches, such as pulsed field gel electrophoresis (PFGE), ribotyping, and repetitive extragenic palindromic (REP)-PCR, single gene targets, and multiple gene targets (multilocus approaches). The goals of these studies include establishing the relatedness of isolates from disease epidemics, discriminating among strains with more or less potential to cause disease or epidemics, and exploring the population biology of these waterborne pathogens. PFGE was consistently among the more discriminatory of the typing methods for all three Vibrio spp., and was useful for tracing the temporal and geographic relatedness of epidemic strains of V. cholerae and V. parahaemolyticus. However, PFGE did not group V. vulnificus strains according to the genotypes that have been proposed as markers of virulence potential. Typing methods that target repetitive elements distributed throughout the genome, such as BOX-PCR and REP-PCR, and DNA sequence-based methods, such as multilocus sequence typing, were also highly discriminatory and, in some cases, superior to PFGE for phylogenetic analysis and identification of strains with high epidemic or virulence potential. As typing methods and strategies are refined and used, the epidemiology, virulence potential, and ecology of these pathogenic Vibrio spp. will become better understood.     

Isotope ratio monitoring gas chromatography/Mass spectrometry of D/H by high temperature conversion isotope ratio mass spectrometry

Of all the elements, hydrogen has the largest naturally occurring variations in the ratio of its stable isotopes (D/H). It is for this reason that there has been a strong desire to add hydrogen to the list of elements amenable to isotope ratio monitoring gas chromatography/mass spectrometry (irm-GC/MS). In irm-GC/MS the sample is entrained in helium as the carrier gas, which is also ionized and separated in the isotope ratio mass spectrometer (IRMS). Because of the low abundance of deuterium in nature, precise and accurate on-line monitoring of D/H ratios with an IRMS requires that low energy helium ions be kept out of the m/z 3 collector, which requires the use of an energy filter. A clean mass 3 (HD(+.)) signal which is independent of a large helium load in the electron impact ion source is essential in order to reach the sensitivity required for D/H analysis of capillary GC peaks. A new IRMS system, the DELTA(plus)XL(trade mark), has been designed for high precision, high accuracy measurements of transient signals of hydrogen gas. It incorporates a retardation lens integrated into the m/z 3 Faraday cup collector. Following GC separation, the hydrogen bound in organic compounds must be quantitatively converted into H(2) gas prior to analysis in the IRMS. Quantitative conversion is achieved by high temperature conversion (TC) at temperatures >1400 degrees C. Measurements of D/H ratios of individual organic compounds in complicated natural mixtures can now be made to a precision of 2 per thousand (delta notation) or, better, with typical sample amounts of approximately 200 ng per compound. Initial applications have focused on compounds of interest to petroleum research (biomarkers and natural gas components), food and flavor control (vanillin and ethanol), and metabolic studies (fatty acids and steroids). Copyright 1999 John Wiley & Sons, Ltd.     

The First Catalytic Asymmetric Nitro-Mannich-Type Reaction Promoted by a New Heterobimetallic Complex

The best ratio is 1:1:3 for the components Yb, K, and binaphthol in the new heterobimetallic complex, which efficiently catalyzes an asymmetric nitro-Mannich-type reaction. The desired nitro-Mannich products 2 are obtained with up to 91 % ee starting from N-phosphinoyl imines 1.     

Graft and block copolymers with polysiloxane and vinyl polymer segments

A convenient new process to make silicone/organic block and graft copolymers has been recently demonstrated. This dual copolymerization process combines conventional condensation polymerization of the siloxane segments with free radical polymerization of the organic vinyl polymer segments. The copolymerization process is relatively simple and economical compared with other copolymerization techniques as it uses commonly available starting materials and available process equipment. Silicone segments containing alkene side chains or end-groups are prepared in the usual way by polycondensation using an acid or base catalyst. The double bonds of the alkene groups are oxidized to carbonyls which are then used to initiate vinyl monomer polymerization and link the siloxane with the vinyl segments. This initiation step is based on a redox system of copper^(II) salts which generates free radicals on the alpha carbons next to the carbonyl groups. This copolymerization process is relatively fast and proceeds at high yields.     

Effects of Arsenic Compounds on Proliferation and Nitric Oxide Synthesis in C3H 10T 1/2 Murine Fibroblasts

Exposure to arsenic, either through chronic consumption of contaminated water or inhalation, is associated with increased risk of cancer, yet the mechanism by which arsenicals promote neoplastic change remains undefined. The carcinogenic process involves the formation of heritable genetic changes in the DNA of normal cells and this process may be enhanced by environmental agents that increase cellular proliferation, increase DNA damage and decrease the ability to repair damage or cause immunosuppression. We describe the inhibition of cellular proliferation of C3H 10T1/2 murine fibroblasts in the presence of 1.0 μM arsenate or arsenite; yet cacodylic acid had no significant effect on cell growth in culture at this concentration. Both arsenate and cacodylate, at micromolar concentrations, slightly stimulated cell growth and cell density when cells were treated with interferon-γ/lipopolysaccharide (IFN-γ/LPS). At 1 μM , arsenate and cacodylate also slightly increased IFN-γ/LPS-induced nitric oxide (NO) synthesis in this cell line, consistent with the increase in cell number observed, whereas 1 μM arsenite significantly increased NO production on a per-cell basis. In contrast, arsenite significantly inhibited NO synthesis at concentrations above 10 μM arsenite as, to a lesser extent, did arsenate and cacodylate. These results suggest that ingestion of arsenicals could alter cellular generation of NO and interfere with its associated physiological functions. © 1997 by John Wiley & Sons, Ltd.     

Applications of triple resonance NMR techniques to the study of polymer structure and reactivity

The utility of isotopic labeling combined with triple resonance nuclear magnetic resonance (NMR) techniques for polymer structure and reactivity investigations will be demonstrated. One dimensional (1D) and two dimensional (2D) ¹H/¹⁹F/¹³C triple resonance NMR experiments have been used to study the structure of fluoropolymers; and ¹H/²H/¹³C triple resonance techniques have been used to study the reactivity of poly[(styrene-alt-(methyl methacrylate)] and the structure of deuterated polybutadiene. These methods provide a unique ability to selectively detect resonances of structural features that are present in minute amounts in polymers, without interference from the much larger signals of the rest of the polymer.     

Cycloadditions of chiral carbonyl ylides with imine dipolarophiles as a route to enantiomerically pure α-amino-β-hydroxy acids

The preparation of enantiomerically pure threo-β-amino-α-hydroxy acids via 1,3-dipolar cycloadditions of imine dipolarophiles with the chiral isomünchnone derived from (5R)-5-phenylmorpholin-3-one 1 is described. The cycloadducts were obtained with excellent diastereofacial- and exo-selectivity. Subsequent hydrolysis and chemoselective exocyclic amide cleavage afforded the threo-β-amino-α-hydroxy acids with recovery of the initial chiral auxiliary.     

59Co solid-state NMR as a new probe for elucidating metal binding in polynucleotides

Although magnesium fulfills several essential biochemical roles, direct studies on this ion are complicated by its unfavorable spectroscopic characteristics. This contribution explores the possibility of monitoring magnesium-nucleic acid binding via a combination of [Co(NH3)6]3+ as surrogate for [Mg(H2O)6]2+, and of high-resolution solid-state 59Co NMR as a spectroscopic probe. Such strategy quenches fast cationic exchanges between bound and free states, while exploiting the superior NMR properties of the 59Co spin. Experiments on relatively small amounts of tRNA can then discern resonances corresponding to different metal binding environments. These characterizations were assisted by studies on model compounds and by multinuclear 31P-59Co recoupling experiments.