Microfluidic tool based on the antibody-modified paramagnetic particles for detection of 8-hydroxy-2'-deoxyguanosine in urine of prostate cancer patients

Guanosine derivatives are important for diagnosis of oxidative DNA damage including 8-hydroxy-2'-deoxyguanosine (8-OHdG) as one of the most abundant products of DNA oxidation. This compound is commonly determined in urine, which makes 8-OHdG a good non-invasive marker of oxidation stress. In this study, we optimized and tested the isolation of 8-OHdG from biological matrix by using paramagnetic particles with an antibody-modified surface. 8-OHdG was determined using 1-naphthol generated by alkaline phosphatase conjugated with the secondary antibody. 1-Naphthol was determined by stopped flow injection analysis (SFIA) with electrochemical detector using a glassy carbon working electrode and by stationary electrochemical detection using linear sweep voltammetry. A special modular electrochemical SFIA system which needs only 10 μL of sample including working buffer for one analysis was completely designed and successfully verified. The recoveries in different matrices and analyte concentration were estimated. Detection limit (3 S/N) was estimated as 5 pg/mL of 8-OHdG. This method promises to be very easily modified to microfluidic systems as "lab on valve". The optimized method had sufficient selectivity and thus could be used for determination of 8-OHDG in human urine and therefore for estimation of oxidative DNA damage as a result of oxidation stress in prostate cancer patients.     

Molecular gallosilicates and their group 4 multimetallic derivatives

Reaction between the silanediol (HO)(2)Si(OtBu)(2) and gallium amides, LGaCl(NHtBu) and LGa(NHEt)(2) (L = [HC{C(Me)N(Ar)}(2)](-), Ar = 2,6-iPr(2)C(6)H(3)), respectively, resulted in the facile isolation of molecular gallosilicates LGaCl(μ-O)Si(OH)(OtBu)(2) (1) and LGa(NHEt)(μ-O)Si(OH)(OtBu)(2) (2). Compound 2 easily reacts with 1 equiv of water to form the unique gallosilicate-hydroxide LGa(OH·THF)(μ-O)Si(OH)(OtBu)(2) (3). Compounds 1-3 contain the simple Ga-O-SiO(3) framework and are the first structurally authenticated molecular gallosilicates. These compounds may be used not only as models for gallosilicate-based materials but also as further reagents because of the presence of reactive functional groups attached to both gallium and silicon atoms. Accordingly, seven molecular heterometallic compounds were obtained from the reactions between compound 3 and group 4 amides M(NMe(2))(4) (M = Ti, Zr) or M(NEt(2))(4) (M = Ti, Zr, Hf). Hence, by tuning the reactions conditions and stoichiometries, it was possible to isolate and structurally characterize the complete 1:1 and 2:1 series (4-10). Completely inorganic cores of types M-O-Ga-O-Si-O and spiro M[O-Ga-O-Si-O](2) were obtained and characterized by common spectroscopic techniques.     

Effect of five different stages of ripening on chemical compounds in medlar (Mespilus germanica L.)

The study of changes of nutritional value of fruit during the ripening process can help estimate the optimal date for fruit harvesting to achieve the best quality for direct consumption and further utilization. The aim of this study was to monitor the changes of chemical composition of medlar fruit (Mespilus germanica L.) measured at five various ripening stages including 134, 144, 154, 164 and 174 days after full bloom (DAFB). Fruits were analyzed and ascorbic acid (AA) and total phenolic compound content with respect to the total antioxidant activity were determined. In addition, selected micronutrients and macronutrients were monitored. The results of our experiments demonstrate that ascorbic acid, total phenolic compound content and total antioxidant activity decreased significantly with increasing time of ripeness. The decreasing tendency in potassium, calcium and magnesium contents during the ripening stages was also determined. During the ripening period, the content of all micronutrients as well as phosphorus and sodium was balanced, with no statistically significant differences between the monitored ripening stages, which can be considered as a positive fact with respect to ideal consumption quality of fruit.     

Dirac-type conditions for hamiltonian paths and cycles in 3-uniform hypergraphs

A hamiltonian path (cycle) in an n-vertex 3-uniform hypergraph is a (cyclic) ordering of the vertices in which every three consecutive vertices form an edge. For large n, we prove an analog of the celebrated Dirac theorem for graphs: there exists n₀ such that every n-vertex 3-uniform hypergraph H, n?n₀, in which each pair of vertices belongs to at least n/2−1 (⌊n/2⌋) edges, contains a hamiltonian path (cycle, respectively). Both results are easily seen to be optimal.     

Chip-Based CE for Avidin Determination in Transgenic Tobacco and Its Comparison with Square-Wave Voltammetry and Standard Gel Electrophoresis

Avidin transgenic plants are a potential tool for providing resistance against various species of insect pests due to the sequestration of vitamin H (biotin) in the plant from the insect pests. In this project we compared three techniques for avidin determination in transgenic tobacco plants, a novel chip-based capillary electrophoretic method (Experion), classical polyacrylamide gel electrophoresis in the presence of sodium dodecyl sulphate (SDS-PAGE) and a square wave voltammetric method using a carbon paste electrode. We determined that the automated chip-based capillary electrophoretic method is rapid, sensitive and the results obtained are well repeatable. The avidin content measured in transgenic tobacco leaves using chip-based capillary electrophoresis varied from 15 to 854 ng per mg of fresh mass depending on the individual plant.     

The interaction of Cu and S2 with aluminum and alumina surfaces: a comparative study

The bonding interactions between Cu and Al are much stronger than those between Cu and Al₂O₃. Cu atoms supported on alumina show a narrow 3d band with a centroid shifted 0.35 eV with respect to that of the 3d band in bulk metallic Cu. In contrast, Cu atoms deposited on aluminum exhibit shifts of 1.3–1.6 eV in the centroid of the 3d band. Similar differences are observed when comparing the behavior of Ag and Pt overlayers on alumina and aluminum. The d band shifts on the oxide substrate are in the order of 0.3–0.4 eV, whereas on the metal substrate they vary from 0.8 to 2.0 eV. These trends are explained in terms of a simple model that takes into account changes in the energy of the Al(3s, 3p) bands when going from metallic aluminum to alumina. The sticking coefficient of S₂ on alumina surfaces is at least one order of magnitude smaller than on aluminum, a difference that also reflects variations in the position of the Al(3s,3p) bands. Submonolayer coverages of Cu do not produce significant changes in the electronic properties of Al₂O₃. In contrast, the deposition of small amounts of sulfur (0.1 ML) induces a substantial reduction (0.4–0.5 eV) in the binding energies of the O KVV, O 1s and Al 2p features of alumina. This is consistent with a transfer of electrons from alumina into the S atoms that produces a transformation similar to a change from n-type to p-type semiconductors. The reactivity of Cu/Al₂O₃ surfaces toward sulfur is much larger than that of pure Al₂O₃ surfaces. Cu clusters supported on alumina react with S₂ to form CuS_x compounds that decompose at temperatures between 850 and 1100 K.     

A scanning tunneling microscopy study on the effect of post-deposition annealing of copper phthalocyanine thin films

Using scanning tunneling microscopy, overlayer lattice structures and thin film morphology of copper phthalocyanine (CuPc) have been investigated while varying posterior, annealing temperatures. The room temperature deposition of CuPc on Ag(1 1 1) resulted in ordered domains, which were three molecular layers high and separated with disordered regions. The ordered surface also exhibited an oblique lattice with the lattice constants of 13.3 Å and 16.4 Å and the angle of 74° between the two. By annealing the thin films systematically to 580 K, the symmetry of overlayer lattice increased from the oblique to the square lattice, commonly observed on various substrates. Further annealing to 780 K desorbed much of the CuPc molecules. However, the remaining molecules reacted and formed dendrite-like chains, in which each CuPc molecule was linked through its isoindole rings. A possible model for the formation of dendritic chains through polymerization is discussed.     

Soluble, reactive and stable - unique aluminosilicate ligands and a heterobimetallic derivative [LAl(SLi)(micro-O)Si(OLi.2thf)(OtBu)2]2

The heterobimetallic aluminosilicate [LAl(SLi)(micro-O)Si(OLi.2thf)(O(t)Bu)(2)](2) was prepared from the LAl(SH)(micro-O)Si(OH)(O(t)Bu)(2) (L = [HC{C(Me)N(Ar)}(2)](-), Ar = 2,6-di-(i)Pr(2)C(6)H(3)) ligand, which can also be hydrolyzed to LAl(OH.thf)(micro-O)Si(OH)(O(t)Bu)(2)- leading to the first aluminosilicate-dihydroxide soluble in organic solvents.     

Analytical strategies for controlling polysorbate-based nanomicelles in fruit juice

This study focused on the detection and quantification of organic micelle-type nanoparticles (NPs) with polysorbate components (polysorbate 20 and polysorbate 80) in their micelle shells that could be used to load biologically active compounds into fruit juice. Several advanced analytical techniques were applied in the stepwise method development strategy used. In the first phase, a system consisting of ultrahigh-performance liquid chromatography employing a size exclusion column coupled with an evaporative light scattering detector (UHPLC-SEC-ELSD) was used for the fractionation of micelle assemblies from other, lower molecular weight sample components. The limit of detection (LoD) of these polysorbate micelles in spiked apple juice was 500 μg mL^?1. After this screening step, mass spectrometric (MS) detection was utilized to confirm the presence of polysorbates in the detected micelles. Two alternative MS techniques were tested: (i) ambient high-resolution mass spectrometry employing a direct analysis in real time ion source coupled with an Orbitrap MS analyzer (DART-Orbitrap MS) enabled fast and simple detection of the polysorbates present in the samples, with a lowest calibration level (LCL) of 1000 μg mL^?1; (ii) ultrahigh-performance reversed-phase liquid chromatography coupled with high-resolution time-of-flight mass spectrometry (UHPLC-HRTOF-MS) provided highly selective and sensitive detection and quantification of polysorbates with an LCL of 0.5 μg mL^?1.