Characterization of the 310-helix in model peptides by HRMAS NMR spectroscopy

A tetra- and a hepta-homopeptide from the C(alpha)-tetrasubstituted Aib (alpha-aminoisobutyric acid) residue were covalently linked to the POEPOP resin by the fragment-condensation approach. The conformational preferences of the two model peptides were determined for the first time on a solid support by means of high-resolution magic angle spinning NMR spectroscopy. The results obtained indicate that the Aib homopeptides adopt a regular 3(10)-helical structure even when they are covalently bound to a polymeric matrix, and thus confirm the remarkable conformational stability of the peptides rich in this amino acid. An ATR-FTIR spectroscopic investigation, performed in parallel, also confirmed that these polymer-bound peptides do indeed adopt a helical conformation. The results of this study open the possibility to exploit the peptide-resin conjugates based on C(alpha)-tetrasubstituted alpha-amino acids as helpful, structurally organized templates in molecular recognition studies or as catalysts in asymmetric synthesis.     

Multi-selective one dimensional proton NMR experiments for rapid screening and binding affinity measurements

High-throughput ligand-based proton NMR screening performed in the presence of a spy molecule and a control molecule is a valuable tool for identifying drug leads. A limitation of the technique is represented by the severe overlap encountered in the screening of large chemical mixtures. An approach for overcoming this overlap problem is the use of multi-selective R(1) filtered and COSY or TOCSY experiments. Application of this methodology to compounds binding to the Sudlow site I of human serum albumin is presented. The screening is performed by simply monitoring the intensity of two signals. The precise measurement of the relative intensity of the two resonances permits determination of the binding constant of the NMR-hit. For a simple competition binding mechanism, the rapidly-derived NMR binding constants are in good agreement with the values derived from full-titration ITC and fluorescence spectroscopy measurements.     

Preparation of "high specific activity" radiochemical forms of vanadium,manganese and thallium for metallo-toxicological studies

In this paper are presented the production methods for very "high specific activity" radionuclides (HSA-RN) of vanadium, manganese and thallium which have been developed in our laboratories for labelling different chemical forms of these elements present in the echo-systems in ultra-trace amounts, for metallo-toxicological and bio-kinetic studies. Use was made of both cyclotron and thermal nuclear reactor. If the nuclear reaction product has atomic number different from irradiated target, it is possible separating the radioactive nuclide from irradiated target, without addition of isotopic carrier. This kind of radionuclide is named No Carrier Added, NCA, and his specific activity, As is very high and can reach values close to the theoretical Carrier Free one, CF. The experimental determination of specific activity, chemical and radiochemical purities is mandatory for all these kinds of applications.     

In situ-preparation and characterization of silver-HEMA/PEGDA hydrogel matrix nanocomposites: Silver inclusion studies into hydrogel matrix

Poly(ethylene glycol) diacrylate (PEGDA) of different molecular weights (Mn = 575 and 700) was used as crosslinking agent for the photopolymerization of 2-hydroxyethyl methacrylate (HEMA) in order to obtain HEMA/PEGDA-based hydrogels. Composites were synthesized in situ employing a new methodology that implies the addition of different quantities of silver nitrate aqueous solution to the monomer mixture with the finality to obtain hydrogels with different silver nanoparticles’ spatial density and distribution. Samples were characterized by thermal, optical, spectroscopic and structural/morphological methods. Thermal studies showed that the increase of PEGDA molecular weight and the AgNO₃ concentration in the reaction mixture enhance the glass transition temperature and the thermal stability of the composites. This behavior could be related to the silver coordination with the polymer network. Infrared spectroscopy with Fourier transform and Raman analyses were realized in order to corroborate the sample chemical structure by the identification of specific functional groups. Surface hydrogel morphology was visualized with scanning electron microscopy analysis, detecting a homogeneous micro-porous surface for the samples obtained from high molecular weight PEGDA. Presence of silver nanoparticles was established by X-ray fluorescence spectroscopy and UV/Vis methods. In this last case, the characteristic silver nanoparticle plasmon was observed. Using Transmission Electron Microscopy it was possible to visualize a homogeneous spatial distribution of spherical silver nanoparticles with very narrow diameter distribution that rounds about 14–21 ± 5 nm. In general, the silver nanoparticle presence in the compounds enhances considerably their thermal/morphological characteristics.     

A new application of imprinted polymers: Speciation of organotin compounds

Molecular imprinting technology has been employed for the first time to prepare a specifically affinity chromatographic stationary phase for speciation purposes. Tributyltin has been chosen as the template molecule and the non-covalent approach has been applied. Three different polymerization methods have been evaluated: (i) a composite material, (ii) a polymer prepared via-Iniferter grafting; (iii) an emulsion polymer. Columns packed with different polymers have been evaluated by liquid chromatography (LC) coupled to inductively coupled plasma mass spectrometry (ICP-MS). The chromatographic conditions as well as the analytical characteristics of the developed method are discussed in this paper. Our findings have shown formation of specific cavities in the grafted Iniferter as well as in the emulsion polymers with the latter achieving resolution of four organotin compounds. Detection limits are similar to those obtained with commercial, but not specific, stationary phases (6 pg for monobutyltin, MBT; 10 pg for both tributyltin, TBT, and triphenyltin, TPhT; and 20 pg for dibutyltin, DBT). The main advantage of this proposed stationary phase is that good recovery is obtained for all species, including MBT. Baseline resolution for TBT and TPhT has also been obtained. The high selectivity of this column prevents matrix interferences. The method has been validated by analyzing two biota reference materials (ERM-CE477 mussel tissue and T-38 oyster tissue).     

Inductively coupled plasma mass spectrometric determination of molybdenum in urine

A method was developed for the determination of molybdenum (Mo) in human urine by direct dilution of the sample in doubly distilled water with 1% HNO3 (v/v) and inductively coupled mass spectrometry (ICP-MS). In and Y were used as internal standards. Since (98)Mo provides a higher sensitivity, it was chosen as the reference isotope. The influence of different factors, such as sample dilution, HNO3 concentration and the stability of the analyte were evaluated. The detection limit (LOD) was assessed at 0.2 microg/L Mo, while the lower limit of quantification (LOQ) was 0.6 microg/L. Recoveries ranged between 97.2 and 100.7% from solutions containing from 10 to 50 microg/L Mo. Linear calibration curves were generated from 2.1 and 52.1 microg/L with coefficients of variation (CV ) ranging from 1.62 to 3.56%. In order to establish reference values (RV) for molybdenum, the procedure presented here was used to determine Mo in the urine of a population group living in Tuscany, Italy.     

V2O5/TiO2 Catalytic Xerogels Raman and EPR Studies

Raman spectroscopy and Electron Paramagnetic Resonance (EPR) studies were performed on a series of V₂O₅/TiO₂ catalysts prepared by a modified sol-gel method in order to identify the vanadium species. Two species of surface vanadium were identified by Raman measurements, monomeric vanadyls and polymeric vanadates. Monomeric vanadyls are characterized by a narrow Raman band at 1030 cm^–1 and polymeric vanadates by two broad bands in the region from 900 to 960 cm^–1 and 770 to 850 cm^–1. The Raman spectra do not exhibit characteristic peaks of crystalline V₂O₅. These results are in agreement with those of X-ray Diffractometry (XRD) and Fourier Transform Infrared (FT-IR) previously reported (C.B. Rodella et al., J. Sol-Gel Sci. Techn., submitted). At least three families of V⁴⁺ ions were identified by EPR investigations. The analysis of the EPR spectra suggests that isolated V⁴⁺ ions are located in sites with octahedral symmetry substituting for Ti⁴⁺ ions in the rutile structure. Magnetically interacting V⁴⁺ ions are also present as pairs or clusters giving rise to a broad and structureless EPR line. At higher concentration of V₂O₅, a partial oxidation of V⁴⁺ to V⁵⁺ is apparent from the EPR results.     

Fluoropolyethers end‐capped by polar functional groups. IV. A novel approach to the evaluation of reactivities of hydroxy‐terminated ethoxylated fluoropolyethers in the tin(IV)‐catalyzed reactions with isophorone diisocyanate

The effect of catalyst dibutyltin dilaurate (DBTDL) on the kinetics of urethane formation reactions of α,ω‐bis(hydroxy)‐terminated fluoropolyethers Fomblin® Z‐DOL TXs (FPEs) of various molecular weights and poly(oxyethylene) glycol PEG‐400 with isophorone diisocyanate (IPDI) in hexafluoroxylene (HFX) and tetrahydrofuran (THF) at 40 °C and NCO:OH = 2:1 have been studied in a broad range of catalyst (0.10–9.00) ×10^?4 M and total reagents (10.0–60.1 wt %) concentrations. The rate of tin‐catalyzed second‐order reactions (with respect to diol and diisocyanate) was found to be proportional to the square root of catalyst concentration [DBTDL]^0.5 both in low polar (HFX) and polar (THF) solvents. Effect of catalyst saturation was revealed for all the reaction systems at higher DBTDL concentrations as well as the appearance of the limiting catalyst concentrations C_lim below which the rates of reaction were close to zero. Based on these findings new effective rate coefficients have been derived k = k_cat/(C ? C) that are independent of the total reagent concentration in the range of 10.0–60.1 wt % ([OH] = 0.10–0.91 equiv/L). This new approach highlights that the rate of the tin‐catalyzed urethane formation reactions of α,ω‐bis(hydroxy)‐terminated fluoropolyethers Z‐DOL TXs with IPDI in HFX at 40 °C and NCO:OH = 2:1 increases significantly with increasing MW of FPE from 776 up to 3405. © 2004 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 42: 5354–5371, 2004     

Chemical waves and pattern formation in the 1,2-dipalmitoyl-sn-glycero-3-phosphocholine/water lamellar system

The present work deals with the spatially extended oscillatory Belousov Zhabotinsky reaction-diffusion system carried out in an anisotropic environment of phosphatidylcholines/water binary system, which presents layered aqueous domains separated by lipid bilayers. We report the occurrence of stable Turing patterns, spiral waves, and other exotic structures in phospholipids bilayers that are generally used as a models for cell plasma membranes.