STOICHIOMETRY and KINETICS OF PROTON RELEASE UPON PHOTOSYNTHETIC WATER OXIDATION

Abstract— We studied the magnitude and the rise kinetics of proton release into the interior of thylakoids by flash spectrophotometty with neutral red as pH indicator. Excitation of dark-adapted thylakoids by a series of between 4 and 11 flashes produced a complex pattern of proton release into the thylakoid lumen. Proton release upon each flash was time resolved.
A slow component of proton release oscillated weakly in magnitude with period of two as function of flash number. It exhibited a half-rise time of approximately 20 ms from the very first flash on, and it was abolished by inhibitors of plastohydroquinone oxidation. This component was attributed to the oxidation of plastohydroquinone by PS I via the Cytb₆/f complex.
Additionally, rapid and multiphasic proton release was observed with half-rise times of less than 2 ms which exhibited a pronounced and damped oscillation with period of four as function of flash number. This rapid proton release was attributed to water oxidation. A detailed kinetic analysis suggested that proton release occurred with the following stoichiometry and with the following half-rise times during the transitions S₁ S_i+1 of water oxidation: 1 H⁺(250 μs, S₀→₁): 0 H⁺(S₁→ S₂):1 H⁺(200 μs, S₂→S₃):2 H⁺(1.2 ms, S₃→ S₄→ S₀) . Proton release and proton rebinding upon oxidation and reduction of the intermediate electron carrier Z, respectively, may have influenced the kinetics of the respective proton yields but not the stoichiometric pattern.     

Chiral resolution of diastereomeric di- and tripeptides on a teicoplanin aglycone phase by capillary electrochromatography

The chiral separation ability of a capillary packed with teicoplanin aglycone as a chiral stationary phase was investigated. This stationary phase was used successfully for chiral resolution of both diastereomeric dipeptides and tripeptides possessing one or two chiral centers. The composition of the mobile phase was shown to be crucial for separation. The use of reversed-phase mode was clearly superior to the polar-organic mode. The nature of the organic modifier was found to have a marked influence on separation. After optimizing conditions, all diasteromeric dipeptides and tripeptides investigated were baseline-resolved, however, it was not possible to find a uniform mobile phase showing optimal results for all peptides investigated.     

On Metabolic Degradations of Squalene,Lanosterol and Cholesterol in Rat Liver in vivo. Evidence for Recycling of Metabolites for the Synthesis of Isoprene Compounds

(1) Radioactivity of biosynthetically labeled squalene, injected in tracer amounts in rats is incorporated to about equal parts into cholesterol and component(s) of the fatty acid fraction of the liver. The ubiquinones isolated from the liver are radioactive and show about the same specific radioactivity as the cholesterol. It appears therefore, that the squalene which escapes incorporation into cholesterol is degraded to metabolite(s) suited for the synthesis of isoprene compounds. (2) Radioactivity of injected biosynthetically and chemically labeled cholesterol is traced in the ubiquinones and the squalene of rat liver indicating that a degradation of cholesterol and a recycling of the metabolite(s) occurs. (3) A recycling of metabolite(s) of squalene and of cholesterol can explain the observation that after labeled mevalonate or acetate as precursor, radioactivity can be traced in the squalene of the liver many hours after the injection and maintains a constant value during a period of several hours. (4) Radioactivity of biosynthetically labeled lanosterol is not only incorporated into cholesterol but a considerable part of it into component(s) of the bile acid fraction of the liver. Evidence is obtained that this transformation occurs by circumventing cholesterol as intermediate.     

One-way biohydrogen transfer for oxidation of sec-alcohols

Quasi-irreversible oxidation of sec-alcohols was achieved via biocatalytic hydrogen transfer reactions using alcohol dehydrogenases employing selected ketones as hydrogen acceptors, which can only be reduced but not oxidized. Thus, only 1 equiv of oxidant was required instead of a large excess. For the oxidation of both isomers of methylcarbinols a single nonstereoselective short-chain dehydrogenase/reductase from Sphingobium yanoikuyae was identified and overexpressed in E. coli.     

Investigations of Li-containing SiCN(O) ceramics via 7Li MAS NMR

Lithium-containing silicon (oxy)carbonitride ceramics (SiCN(O):Li) were synthesized via precursor-to-ceramic-transformation of Li-containing (poly)silazanes. The precursors were obtained by lithiation of 2,4,6-trimethyl-2,4,6-trivinylcyclotrisilazane with n-butyllithium and by reaction of a commercial poly(organosilazane) VL20 with metallic lithium. The annealing treatment was carried out at temperatures between 200 and 1400 degrees C in argon (DeltaT=200 degrees C) and yielded Li-containing silicon (oxy)carbonitride. X-ray powder diffraction revealed that the resulting SiCN(O):Li ceramics were basically amorphous up to temperatures of 1000 degrees C and formed LiSi(2)N(3), graphite and silicon carbide as crystalline phases at higher temperatures. (7)Li MAS NMR spectroscopy was carried out to investigate the structure of the Li-containing phases and to study the reaction path of metallic Li with polysilazane. Based on the NMR spectra, there is almost no difference found in the chemical shift of the SiCN(O):Li ceramics obtained at different temperatures. Accordingly, Li is assigned to be mainly coordinated to N and O present as contaminant element. Relaxation time measurements showed that the most mobile Li(+) species seems to be present in the product obtained in the pyrolysis temperature range between 600 and 1000 degrees C.     

Chemically Synthesized,Self-Assembling Small Interfering RNA-Prohead RNA Molecules Trigger Dicer-Independent Gene Silencing

RNA interference (RNAi) mediated by small interfering RNA (siRNA) duplexes is a powerful therapeutic modality, but the translation of siRNAs from the bench into clinical application has been hampered by inefficient delivery in vivo. An innovative delivery strategy involves fusing siRNAs to a three-way junction (3WJ) motif derived from the phi29 bacteriophage prohead RNA (pRNA). Chimeric siRNA-3WJ molecules are presumed to enter the RNAi pathway through Dicer cleavage. Here, we fused siRNAs to the phi29 3WJ and two phylogenetically related 3WJs. We confirmed that the siRNA-3WJs are substrates for Dicer in vitro. However, our results reveal that siRNA-3WJs transfected into Dicer-deficient cell lines trigger potent gene silencing. Interestingly, siRNA-3WJs transfected into an Argonaute 2-deficient cell line also retain some gene silencing activity. siRNA-3WJs are most efficient when the antisense strand of the siRNA duplex is positioned 5′ of the 3WJ (5′-siRNA-3WJ) relative to 3′ of the 3WJ (3′-siRNA-3WJ). This work sheds light on the functional properties of siRNA-3WJs and offers a design rule for maximizing their potency in the human RNAi pathway.     

V2Cu3Ga8, Mo2Cu3Ga8 and W2Cu3Ga8—New compounds with a novel order variant of a bcc packing and motifs of self-similarity

Single crystals of the new compounds TM₂Cu₃Ga₈ (TM=V, Mo, W) were synthesised from the elements. Structure determinations of the isotypic compounds (cI104, space group , Z=8; Mo₂Cu₃Ga₈: a=11.9171(10) Å, 613 refl., 23 param., R₁(F)=0.022, wR₂(F²)=0.047; W₂Cu₃Ga₈: 11.9248(8) Å, 346 refl., 23 param., R₁(F)=0.048, wR₂(F²)=0.086; V₂Cu₃Ga₈: 11.7861(14) Å, 374 refl., 24 param., R₁(F)=0.033, wR₂(F²)=0.081) showed a new cubic structure type which can be classified as an ordered defect variant of a bcc packing with a^′=4a: [(TM)₂(Cu)₃(□)₃][Ga₈]. The coordination polyhedra of the transition metals consist of Ga₈-cubes with 3 sides capped by Cu leading to coordination number 11. The arrangement of the TMGa₈Cu₃-polyhedra is in a way they form itself a 3-fold capped cube. All compositions were confirmed by EDX measurements.     

Pyrene modification leads to increased catalytic activity in minimal hammerhead ribozymes

Highly active variants of minimal hammerhead ribozymes are generated by the replacement of substantial parts of stem-loop structures with pyrene building blocks.