Binding Modes of Thioflavin T on the Surface of Amyloid Fibrils Studied by NMR

The mechanism for the interaction of thioflavin T (ThT) with amyloid fibrils at the molecular level is not known. Here, we used ¹H NMR spectroscopy to determine the binding mode of ThT on the surface of fibrils from lysozyme and insulin. Relayed rotating‐frame Overhauser enhancements in ThT were observed, indicating that the orientation of ThT is orthogonal to the fibril surface. Importantly, the assembly state of ThT on both surfaces is different. On the surface of insulin fibrils, ThT is oligomeric, as indicated by rapid ¹H spin‐lattice relaxation rate in the rotating frame (R_1ρ), presumably due to intermolecular dipole–dipole interactions between ThT molecules. In contrast, ThT on the surface of lysozyme fibrils is a monomer, as indicated by slower ¹H R_1ρ. These results shed new light into the mechanism for the enhancement of ThT fluorescence and may lead to more efficient detectors of amyloid assemblies, which have escaped detection by ThT in monomer form.     

Large‐Scale Synthesis of Enantiopure Molecular Cages: Chiroptical and Recognition Properties

A convenient and efficient gram‐scale synthesis for enantiopure hemicryptophane–tren (tren=tris(2‐aminoethyl)amine) derivatives has been developed. The four‐step synthesis is based on the optical resolution of a key intermediate, cyclotriveratrylene, for which the energy barrier for racemization has been measured to ensure that no racemization occurs during the two last steps of the synthetic pathway. The assignments of the absolute configurations have been performed by electronic circular dichroism and the enantiopurity was determined by NMR spectroscopy in the presence of enantiopure camphor sulfonic acid. To highlight the interest of such compounds, the recognition of norephedrine neurotransmitter was investigated and showed a remarkable enantioselectivity towards the C₃ symmetrical hosts. Finally, this highly modular synthetic pathway was used to provide eight enantiopure hemicryptophanes with different sizes, shapes, and functionalities. These results underline the high potential of this approach, which could lead to many applications in chiral recognition or asymmetric supramolecular catalysis.     

Threshold photoelectron study of naphthalene, anthracene, pyrene, 1,2-dihydronaphthalene, and 9,10-dihydroanthracene

Threshold photoelectron spectra (TPESs) were obtained for naphthalene, anthracene, pyrene, 1,2-dihydronaphthalene, and 9,10-dihydroanthracene using imaging photoelectron photoion coincidence spectroscopy, from threshold to a photon energy of ～20 eV. Outer valence Green's function calculations at the OVGF∕cc-pVTZ level of theory were used to assign molecular orbitals to the observed TPES features. There is generally good agreement between the predicted and observed bands. Threshold regions for each molecule exhibit vibrational structure which is readily assigned based on previous PES studies. While the measured adiabatic ionization energies (IE(a)) for naphthalene, anthracene, and pyrene are in good agreement with previous works, new values are reported for the two dihydro species (1,2-dihydronaphthalene, 8.010 ± 0.010 eV and 9,10-dihydroanthracene, 8.335 ± 0.010 eV). A comparison is also made with the G3∕∕B3LYP composite method, which consistently overestimates the IE values by 0.06-0.09 eV. The double ionization energies for anthracene and pyrene have been measured to be 19.3 ± 0.2 and 19.8 ± 0.2 eV, respectively.     

Synthesis, crystal structures, and electronic properties of nonlinear fused thienoacene semiconductors

Two fused thienoacene compounds with two-dimensional ring connectivity were synthesized, and their semiconducting properties were characterized. Both compounds have a crystal structure comprised of herringbone arrays of tight π-π stacks. Strong π-π interactions lead to self-assembly into well-defined crystalline thin films from the vapor phase for both compounds. Field effect transistors were fabricated, affording identical hole mobilities of 3.0 × 10(-3) cm(2)/(V s) and I(on/off) > 10(5).     

On-line on-chip post-column derivatisation reactions for pre-ionisation of analytes and cluster analysis in gradient micro-liquid chromatography/electrospray mass spectrometry

A system is presented that demonstrates the principle of on-line and on-chip post-column derivatisation reactions in micro-high-performance liquid chromatography (micro-HPLC) hyphenated to electrospray time-of-flight mass spectrometry (ESI-TOFMS). In this micro-HPLC-chip-MS set-up, the analytes are separated using gradient micro-HPLC and subsequently derivatised on-chip and detected. One of the major limitations of MS detection is its dependency on the degree of ionisation, which is widely variable and compound-specific. Optimising and controlling the degree of ionisation in a simple manner would allow MS detection to be truly generic. One way of achieving this is by pre-ionisation of analytes using simple derivatisation procedures that are both rapid and quantitative. Performing this in situ on the system described here overcomes issues of sample handling and efficiency losses when time-consuming "bench chemistry" is necessary prior to analysis. The power of the system is demonstrated by the separation of primary and secondary amines, which are subsequently derivatised with a positively charged phosphonium complex and detected in an enhanced manner. Typically, molecular cations (M(+)) are detected showing that the ionisation process is dominated by the phosphonium species, leading to more constant ionisation for a variety of compounds. In addition, stable isotopically labelled ((12)C/(13)C)-phosphonium reagent is used for the reactions, allowing for inherent signal/noise (S/N) improvement and automated data processing using cluster analysis. A similar reaction scheme is used for the derivatisation of ketones and aldehydes, also demonstrating dramatic increases in sensitivity, especially with increasing temperature. Minimal loss in chromatographic fidelity in terms of retention times is observed by the introduction of the micromixer chip into the system. Optimal flow rates in micro-HPLC and ESI-MS are compatible with flow rates for the chip as well as a multitude of in-line optical detectors including UV and fluorescence. In addition, the micromixer chip can be positioned pre-column if preferred. The system is robust, easily fully automated and applicable to a wide variety of reactions. The system has a major advantage in its simple robust connection to the "normal scale" outside world.     

GIT-equivalence and semi-stable subcategories of quiver representations

In this paper, we answer the question of when the subcategory of semi-stable representations is the same for two rational vectors for an acyclic quiver. This question has been previously answered by Ingalls, Paquette, and Thomas in the tame case in [14]. Here we take a more invariant theoretic approach, to answer this question in general. We recover the known result in the tame case.     

The Use of a Simple Multiple-Criteria Model to Assist in Selection from a Shortlist

The use of a simple multiple-criteria model to assist in decision making is described. The model, a hierarchical additive weighted value-function, was used as a part of a decision-making process to select, from a shortlist of three, the company with which to place a contract for the development of a computerized financial management system. The multiple-criteria model and its use are described in detail. To conclude, there is a discussion on the contribution of the model to the decision-making process as perceived by the decision-making group.     

The Binary System Tetradecanedioic Acid–Hexadecanedioic Acid: Polymorphism of the Components and Experimental Phase Diagram

Complementary techniques had to be applied to investigate the binary system tetradecanedioic acid (C₁₄H₂₆O₄)–hexadecanedioic acid (C₁₆H₃₀O₄), because all the forms observed have the same space group (P2₁/c; Z = 2). We studied the polymorphism of the two single compounds and of their mixtures by X‐ray powder diffraction, differential‐scanning calorimetry (DSC), infrared spectroscopy (IR), scanning electron microscopy (SEM), and thermo‐optical microscopy (TOM). The two diacids were found to be isopolymorphic. At low temperature, they crystallize in the same ordered C‐form, and, on heating, adopt the ordered C_h‐form, 1° below their melting point. In contrast to similar compounds (unbranched alkanes, alkanols, and fatty acids), the solid–solid and solid–liquid phase‐transition temperatures decrease with increasing chain length. At low temperature, a new monoclinic form, C_i, appears as a result of the disorder of composition in the mixed samples. There are two [C + C_i]‐type solid–solid domains. On heating, the solid domains are related to solid–liquid domains by a peritectic invariant for compositions rich in C₁₄H₂₆O₄, and by a eutectic invariant for compositions rich in C₁₆H₃₀O₄. At higher temperature, there appears a second peritectic invariant for compositions rich in C₁₄H₂₆O₄, together with a metatectic invariant for compositions rich in C₁₆H₃₀O₄. All the solid forms observed in this binary system are isostructural. Nevertheless, the equilibrium between them is complex near the melting point, and their miscibility in the solid state is reduced.     

Entropy Maximization for Markov and Semi-Markov Processes

The literature about maximum of entropy for Markov processes deals mainly with discrete-time Markov chains. Very few papers dealing with continuous-time jump Markov processes exist and none dealing with semi-Markov processes. It is the aim of this paper to contribute to fill this lack. We recall the basics concerning entropy for Markov and semi-Markov processes and we study several problems to give an overview of the possible directions of use of maximum entropy in connection with these processes. Numeric illustrations are presented, in particular in application to reliability.