Ion Mobility Spectrometry-Hydrogen Deuterium Exchange Mass Spectrometry of Anions: Part 2. Assessing Charge Site Location and Isotope Scrambling

Ion mobility spectrometry (IMS) coupled with gas-phase hydrogen deuterium exchange (HDX)-mass spectrometry (MS) and molecular dynamic simulations (MDS) has been used for structural investigation of anions produced by electrospraying a sample containing a synthetic peptide having the sequence KKDDDDDIIKIIK. In these experiments the potential of the analytical method for locating charge sites on ions as well as for utilizing collision-induced dissociation (CID) to reveal the degree of deuterium uptake within specific amino acid residues has been assessed. For diffuse (i.e., more elongated) [M – 2H]^2– ions, decreased deuterium content along with MDS data suggest that the D4 and D6 residues are charge sites, whereas for the more diffuse [M – 3H]^3– ions, the data suggest that the D4, D7, and the C-terminus are deprotonated. Fragmentation of mobility-selected, diffuse [M – 2H]^2– ions to determine deuterium uptake at individual amino acid residues reveals a degree of deuterium retention at incorporation sites. Although the diffuse [M – 3H]^3– ions may show more HD scrambling, it is not possible to clearly distinguish HD scrambling from the expected deuterium uptake based on a hydrogen accessibility model. The capability of the IMS-HDX-MS/MS approach to provide relevant details about ion structure is discussed. Additionally, the ability to extend the approach for locating protonation sites on positively-charged ions is presented.

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Manganous phosphate acts as a superoxide dismutase

A substantial body of evidence indicates that high intracellular concentrations of inorganic manganous ions render some cells resistant to ionizing radiation and provide substantial antioxidant protection to aerobic cells lacking superoxide dismutase (SOD) enzymes. We found that manganous phosphate is unique among those manganous salts studied in its ability to remove superoxide rapidly and catalytically from aqueous solution via a disproportionation mechanism that is entirely different from those of the SOD enzymes.     

Solvent dependence of the charge-transfer properties of a quaterthiophene–anthraquinone dyad

An electron donor–acceptor dyad (quaterthiophene–anthraquinone) mediates ultrafast intramolecular photoinduced charge separation and consequent charge recombination when in polar or moderately polar solvents. Alternatively, non-polar media completely impedes the initial photoinduced electron transfer by causing enough destabilization of the charge-transfer state and shifting its energy above the energy of the lowest locally excited singlet state. Furthermore, femtosecond transient-absorption spectroscopy reveals that for the solvents mediating the initial photoinduced electron-transfer process, the charge recombination rates were slower than the rates of charge separation. This behavior of donor–acceptor systems is essential for solar-energy-conversion applications. For the donor–acceptor dyad described in this study, the electron-transfer driving force and reorganization energy place the charge-recombination processes in the Marcus inverted region.     

Ti(IV) binds to human serum transferrin more tightly than does Fe(III)

The binding of titanium(IV) to human serum transferrin in 50 mM Tris with 20 mM bicarbonate and 10 mM citrate at pH 7.4 was studied by UV/vis kinetics and by isothermal titration calorimetry. Ti(IV) citrate, [Ti(C6H4O7)3]8-, employed in this study was previously characterized and delivers the metal to transferrin rapidly, allowing the quantification of the intrinsic binding constants for Ti(IV) to the C- and N-sites of transferrin. The results after correcting for blood plasma conditions (pH 7.4, [HCO3-] = 27 mM) reveal that Ti(IV) binds with greater affinity (log K = 26.8 and 25.7) than Fe(III) (log K = 22.5 and 21.4) to transferrin, a finding not previously observed for other examined metal ions. The strength of metal binding to transferrin correlates with the Lewis acidity of the metal. Ti(IV) is more Lewis acidic than Fe(III) and is nearly the same size. The study also reveals that Ti(IV) binds more tightly to one site than the other, and this difference is due to both entropic and enthalpic contributions. The study has implications for the role of transferrin in the anticancer activity of Ti(IV) drugs and the serum binding of Ti(IV) ions released from implants or imaging reagents.     

17O nuclear magnetic resonance studies of some amino acids at natural abundance

¹⁷O chemical shifts of four amino acids at natural abundance have been obtained. Sensitivity was enhanced by accumulating a large number of scans or employing high concentrations at elevated temperature. Routine memory overflow was avoided by using a combination of solvent suppression and phase alternating pulse sequences.     

Local convexity and starshaped sets

Previously [7] we proved among other results that a closed connected set inE _n which has a unique point of local nonconvexity is starshaped. Here we characterize a fairly large class of plane sets whose points of local nonconvexity are so arranged that starshapedness follows. This theory determines as a special case the simple closed polygonal regions which are starshaped. In order to proceed simply we utilize the following notations and definitions. The preparation of this paper was supported in part by NSF Grant GP-1988.     

The Nucleating Effect of Carbon Nanotubes on Crystallinity in R‐BAPB‐Type Thermoplastic Polyimide

Summary: The relatively high degree of crystallinity of a new thermoplastic polyimide (PI) makes it a favorable matrix candidate for fiber reinforced composites. This advantage is the result of the ability of the matrix to recrystallize during the composite manufacturing process. In this study we examine the potential nucleating effect of carbon nanotubes on a thermoplastic PI. In addition to their inherent mechanical contribution, the carbon nanotubes help recover a significant proportion of the original crystallinity.

Scanning electron micrograph of the spherulitic structure of a recrystallized carbon nanotube/polyimide film.     

Regioselective reduction of 3-substituted N-acylpyrazinium salts toward the synthesis of 1,2-dihydropyrazines

The regioselective reduction of 3-substituted N-acylpyrazinium salts with n-Bu(3)SnH has been developed for the synthesis of 3-substituted 1,2-dihydropyrazines in yields of 56-94%. Substitution of the pyrazinium salts with electron-donating groups favors the formation of the 1,2-isomers as a result of their better stability over the 1,6-isomers. Under mild acidic conditions, 3-methoxy substituted 1,2-dihydropyrazine was easily hydrolyzed in excellent yield to Δ(5)-2-oxopiperazine.     

Temperature-dependent H/D exchange of compact and elongated cytochrome c ions in the gas phase

Isotopic exchange reactions of compact and elongated conformations of gaseous cytochrome c ions (+5 and +9 states) with D2O have been measured as a function of temperature (from 300 to approximately 440 K) using ion mobility techniques. Rate constants for those sites that exchange at high temperatures (>400 K) are about an order of magnitude smaller than rate constants for sites that exchange at 300 K. Although the exchange rates decrease, the maximum exchange levels for rapidly exchanging sites increase with temperature. At 300 K, exchange levels of 53 +/- 3 and 63 +/- 3 are measured for the compact and elongated states, respectively. From 300 to 335 K, the exchange levels increase slightly to approximately 60 to 70 hydrogens. Above 335 K, the levels increase to a value of approximately 200 for the +5 state and approximately 190 for the +9 state, near the maximum possible levels, 200 and 204 for these respective charge states. Molecular dynamics simulations have been carried out on structures having calculated cross sections that are near the experimental values in order to explore the exchange process. Overall, it appears that charge site and exchange site proximities are important factors in the exchange profiles for the elongated +9 ion and the compact +5 ion.     

Efficient route to 6-CF3-substituted nicotinic acid derivatives

A novel synthetic sequence for preparation of CF₃-pyridines is presented. Reaction of α,β-unsaturated trifluoromethylketones with α-cyanoketones leads to α-hydroxydihydropyranes 1 containing CF₃-group. α-Hydroxydihydropyranes can be easily transformed to α-hydroxytetrahydropyridines, 1,4-dihydropyridines and CF₃-pyridines. All CF₃-pyridine derivatives were obtained in good yields. This route can be applied for preparation of CF₃-pyridines containing various substituents with further possible modification on cyano-group.