Investigation of the interaction of Mercurochrome® constituents with proteins using liquid chromatography/mass spectrometry

The interaction of Mercurochrome®, a medical preparation based on the mercuryorganic compound merbromin, with free thiols in low molecular weight peptides and in proteins has been investigated by means of liquid chromatography (LC) and electrospray mass spectrometry (ESI-MS). β-Lactoglobulin A (β-LGA) from bovine milk (18.4 kDa) has been used as the model protein. It was found that, in contrast to assumptions in literature, the commercial product itself is a heterogeneous mixture of moderate chemical stability, which may contain precipitated Hg salts depending on storage time and conditions. Further variability results from different degrees of bromination of the fluorescein backbone of the compound. The formation of mercury compound–protein adducts was detected. The peptide sequence T13 containing a free thiol residue was identified as the binding site for mercury species after tryptic digestion of β-lactoglobulin A. While fresh Mercurochrome® tends to the formation of a Hg(II)-β-LGA adducts due to excess Hg²⁺ in solution, investigations after precipitation of Hg salts yield Hg(merbromin)(β-LGA) as the major product.     

SPECTRAL ALBEDO MEASUREMENTS IN THE UV and VISIBLE REGION OVER DIFFERENT TYPES OF SURFACES

Abstract— The spectral albedo of the earth's surface, i.e. the ratio between spectral irradiance reflected by the ground to all directions and global irradiance, was measured by a spectroradiometer in the UV and visible region from 290 nm to 800 nm with a spectral resolution of 1.5 nm at steps of 2 nm in the UV (290–400 nm) and 10 nm in the visible (400–800 nm) region. The measurements were performed over bare fertile soil, sand at the beach, concrete (autobahn) and snow as well as over different types of vegetation (grass, oats, rye, sugar-beet, stubble). As the albedo increases with increasing wavelengths for most types of surfaces considered, it is smaller in the UV than in the visible region. In the UVB region (λ < 315 nm) the measured albedo is as small as 0.016-0.017 over vegetation, 0.04-0.05 over bare fertile soil, 0.07-0.10 over concrete ("autobahn") and 0.62-0.76% over polluted snow with a small wavelength dependence. A somewhat higher albedo occurs in the UVA region (315 < λ < 400 nm) with values ranging from 0.02 over vegetation to 0.05 to 0.08 over bare soil. The albedo over dry bright sand, which is typically found at the beach, is significantly higher (0.14 at 300 nm to 0.24 at 400 nm) than over other snow-free surfaces, thus leading to an enhanced dose of biologically effective radiation at the beach.     

Glycoform characterization of intact erythropoietin by capillary electrophoresis-electrospray-time of flight-mass spectrometry

Glycosylated proteins often show a large variation in their glycosylation pattern, complicating their structural characterization. In this paper, we present a method for the accurate mass determination of intact isomeric glycoproteins based on capillary electrophoresis-electrospray-time of flight-mass spectrometry. Human recombinant erythropoietin has been chosen as a showcase. The approach enables the on-line removal of nonglycosylated proteins, salts, and neutral and negatively charged species. More important, different glycosylation forms are separated both on the base of differences in the number of negatively charged sialic acid residues and the size of the glycans. Thus, 44 glycoforms and in total about 135 isoforms of recombinant human erythropoietin, taking also acetylation into account, could be distinguished for the reference material from the European Pharmacopeia. Distinct glycosylation differences for samples from different suppliers are clearly observed. Based on the accurate mass an overall composition of each single isoform is proposed, perfectly in agreement with data on glycan and glycopeptide analysis. This method is an ideal complement to the established techniques for glycopeptide and glycan analysis, not differentiating branching or linkage isoforms, but leading to an overall composition of the glycoprotein. The presented strategy is expected to improve significantly the ability to characterize and quantify isomeric glycoforms for a large variety of glycoproteins.     

Density functional theory calculations and exploration of a possible mechanism of N2 reduction by nitrogenase

Density functional theory (DFT) calculations have been performed on the nitrogenase cofactor, FeMoco. Issues that have been addressed concern the nature of M-M interactions and the identity and origin of the central light atom, revealed in a recent crystallographic study of the FeMo protein of nitrogenase (Einsle, O.; et al. Science 2002, 297, 871). Introduction of Se in place of the S atoms in the cofactor and energy minimization results in an optimized structure very similar to that in the native enzyme. The nearly identical, short, lengths of the Fe-Fe distances in the Se and S analogues are interpreted in terms of M-M weak bonding interactions. DFT calculations with O or N as the central atoms in the FeMoco marginally support the assignment of the central atom as N rather than O. The assumption was made that the central atom is the N atom, and steps of a catalytic cycle were calculated starting with either of two possible states for the cofactor and maintaining the same charge throughout (by addition of equal numbers of H(+) and e(-)) between steps. The states were [(Cl)Fe(II)(6)Fe(III)Mo(IV)S(9)(H(+))(3)N(3-)(Gl)(Im)](2-), [I-N-3H](2-), and [(Cl)Fe(II)(4)Fe(III)(3)Mo(IV)S(9)(H(+))(3)N(3-)(Gl)(Im)], [I-N-3H](0) (Gl = deprotonated glycol; Im = imidazole). These are the triply protonated ENDOR/ESEEM [I-N](5-) and M?ssbauer [I-N](3-) models, respectively. The proposed mechanism explores the possibilities that (a) redox-induced distortions facilitate insertion of N(2) and derivative substrates into the Fe(6) central unit of the cofactor, (b) the central atom in the cofactor is an exchangeable nitrogen, and (c) the individual steps are related by H(+)/e(-) additions (and reduction of substrate) or aquation/dehydration (and distortion of the Fe(6) center). The Delta E's associated with the individual steps of the proposed mechanism are small and either positive or negative. The largest positive Delta E is +121 kJ/mol. The largest negative Delta E of -333 kJ/mol is for the FeMoco with a N(3-) in the center (the isolated form) and an intermediate in the proposed mechanism.     

High resolution spectroscopy and potential determination of the (3)1Pi state of NaCs

The (3)(1)Pi state of the NaCs molecule was studied by high resolution Fourier-transform spectroscopy. The (3)(1)Pi-->X (1)Sigma(+) laser induced fluorescence was excited by an Ar(+) ion laser or by a single-mode frequency-doubled cw Nd:YAG laser. The presence of argon buffer gas yielded rich rotational relaxation spectra allowing to enlarge the data set for the (3)(1)Pi state term values, as well as to observe Lambda splittings in a wide range of vibrational (v(')) and rotational (J(')) quantum numbers. The data field includes about 820 energy levels of (3)(1)Pi NaCs in the range from v(')=0 to 37 and from J(')=3 to 190, which corresponds to ca. 95% of the potential well depth. Direct fit of the potential energy curve to the level energies is realized using the inverted perturbation approach method; a set of Dunham coefficients is also presented.     

Self-assembled ultra-thin coatings of octadecyltrichlorosilane (OTS) formed at the surface of iron oxide nanoparticles

In a series of experiments, we coated iron oxide nanoparticles, which were originally stabilized with lauric acid, with a polymer layer of Octadecyltrichlorosilane (OTS). Characterization of the different coated nanoparticles was accomplished by Static and Dynamic Light Scattering, acoustic spectroscopy, and Atomic Force Microscopy. In various experiments, we systematically investigated the effect of different parameters such as the OTS concentration and iron oxide content on the particle size of the coated nanoparticles. It was recognized that the size of the coated nanoparticles mainly depend on the concentration of OTS (C _OTS) measured with respect to the concentration of the iron oxide particles (C _mag.). Below a well-defined threshold value of C _OTS /C _mag, we did not observe any adsorption of OTS on the surface of iron oxide nanoparticles. The particle size of OTS-coated iron oxide nanoparticles increased rapidly at concentration ratios above the threshold concentration and reached a typical plateau value for long periods of time.     

Whole‐Cell Photoenzymatic Cascades to Synthesize Long‐Chain Aliphatic Amines and Esters from Renewable Fatty Acids

Long‐chain aliphatic amines such as (S,Z)‐heptadec‐9‐en‐7‐amine and 9‐aminoheptadecane were synthesized from ricinoleic acid and oleic acid, respectively, by whole‐cell cascade reactions using the combination of an alcohol dehydrogenase (ADH) from Micrococcus luteus, an engineered amine transaminase from Vibrio fluvialis (Vf‐ATA), and a photoactivated decarboxylase from Chlorella variabilis NC64A (Cv‐FAP) in a one‐pot process. In addition, long chain aliphatic esters such as 10‐(heptanoyloxy)dec‐8‐ene and octylnonanoate were prepared from ricinoleic acid and oleic acid, respectively, by using the combination of the ADH, a Baeyer–Villiger monooxygenase variant from Pseudomonas putida KT2440, and the Cv‐FAP. The target compounds were produced at rates of up to 37 U g^?1 dry cells with conversions up to 90 %. Therefore, this study contributes to the preparation of industrially relevant long‐chain aliphatic chiral amines and esters from renewable fatty acid resources.     

A branch and bound algorithm for bound constrained optimization problems without derivatives

In this paper, we give a new branch and bound algorithm for the global optimization problem with bound constraints. The algorithm is based on the use of inclusion functions. The bounds calculated for the global minimum value are proved to be correct, all rounding errors are rigorously estimated. Our scheme attempts to exclude most uninteresting parts of the search domain and concentrates on its promising subsets. This is done as fast as possible (by involving local descent methods), and uses little information as possible (no derivatives are required). Numerical results for many well-known problems as well as some comparisons with other methods are given.     

Rank-dependent moderate deviations of U-empirical measures in strong topologies

 We prove a rank-dependent moderate deviation principle for U-empirical measures, where the underlying i.i.d. random variables take values in a measurable (not necessarily Polish) space (S,𝒮). The result can be formulated on a suitable subset of all signed measures on (S ^m ,𝒮^{⊗ m} ). We endow this space with a topology, which is stronger than the usual τ-topology. A moderate deviation principle for Banach-space valued U-statistics is obtained as a particular application. The advantage of our result is that we obtain in the degenerate case moderate deviations in non-Gaussian situations with non-convex rate functions. Received: 22 February 2000 / Revised version: 15 November 2002 / Published online: 28 March 2003 Research partially supported by the Swiss National Foundation, Contract No. 21-298333.90. Mathematics Subject Classification (2000): Primary 60F10; Secondary 62G20, 28A35 Key words or phrases: Rank-dependent moderate deviations – Empirical measures – Strong topology – U-statistics