Protective Effect of Thymus serrulatus Essential Oil on Cadmium-Induced Nephrotoxicity in Rats,through Suppression of Oxidative Stress and Downregulation of NF-κB,iNOS, and Smad2 mRNA Expression

The purpose of the research was to examine the protective effect of essential oil from Thymus serrulatus Hochst. ex Benth. (TSA oil) against cadmium (Cd)-induced renal toxicity. The experimental protocol was designed using 30 healthy adult Wistar albino rats allocated into five groups containing six animals in each group. Group 1 was treated as normal control and groups 2, 3, 4, and 5 were treated with cadmium chloride (CdCl₂, 3 mg/kg, IP) for 7 days. Group 3 was also treated with silymarin (100 mg/kg, PO) as a standard group, while groups 4 and 5 were administered with TSA oil at doses of 100 and 200 mg/kg PO, respectively. The nephrotoxicity was measured with various parameters such as kidney function markers, oxidative stress markers (glutathione (GSH) and malondialdehyde (MDA)), and messenger ribonucleic acid (mRNA) expression levels of inflammatory factors. The histological studies were also evaluated in the experimental protocol. The CdCl₂-treated groups showed a significant increase in the levels of serum kidney function markers along with MDA levels in kidney homogenate. However, renal GSH level was found to be reduced significantly. It was found that CdCl₂ significantly upregulated the nuclear factor levels of kappaB (NF-κB p65), inducible nitric oxide synthase (iNOS), and small mothers against decapentaplegic (Smad2) as compared to the normal control group. On the other hand, TSA oil significantly improved the increased levels of serum kidney function markers, non-enzymatic antioxidants, and lipid peroxidation. In addition, TSA oil significantly downregulated the increased expression of NF-κB p65, iNOS, and Smad2 in Cd-intoxicated rats. Moreover, the histological changes in the tissue samples of the kidney of Cd-treated groups were significantly ameliorated in the silymarin- and TSA-oil-treated groups. The present study reveals that TSA oil ameliorates Cd-induced renal injury, and it is also proposed that the observed nephroprotective effect could be due to the antioxidant potential of TSA oil and healing due to its anti-inflammatory action.     

Synthesis of cyanoethyl chitosan derivatives

Cyanoethyl chitosan derivatives with various substitution degrees have been synthesized by the nucleophilic addition of acrylonitrile to the functional groups of chitosan. The process proceeds under homogeneous conditions without any catalyst at various pH values and reagent concentrations in the temperature range of 273–333 K. The formation of cyanoethyl chitosans is established by a gain in the weight of chitosan, a change in its content of nitrogen, and the appearance of an absorption band at 2250 cm^?1 in the IR spectrum which corresponds to the stretching vibrations of a-C≡N group. It has been shown that the most efficient addition of acrylonitrile occurs at 273 K and pH 5.5. Cyanoethyl chitosan samples show better mechanical parameters and are characterized by a lower ordering than the parent chitosan.     

Discovery of cryptic allosteric sites using reversed allosteric communication by a combined computational and experimental strategy

Allostery, which is one of the most direct and efficient methods to fine-tune protein functions, has gained increasing recognition in drug discovery. However, there are several challenges associated with the identification of allosteric sites, which is the fundamental cornerstone of drug design. Previous studies on allosteric site predictions have focused on communication signals propagating from the allosteric sites to the orthosteric sites. However, recent biochemical studies have revealed that allosteric coupling is bidirectional and that orthosteric perturbations can modulate allosteric sites through reversed allosteric communication. Here, we proposed a new framework for the prediction of allosteric sites based on reversed allosteric communication using a combination of computational and experimental strategies (molecular dynamics simulations, Markov state models, and site-directed mutagenesis). The desirable performance of our approach was demonstrated by predicting the known allosteric site of the small molecule MDL-801 in nicotinamide dinucleotide (NAD⁺)-dependent protein lysine deacetylase sirtuin 6 (Sirt6). A potential novel cryptic allosteric site located around the L116, R119, and S120 residues within the dynamic ensemble of Sirt6 was identified. The allosteric effect of the predicted site was further quantified and validated using both computational and experimental approaches. This study proposed a state-of-the-art computational pipeline for detecting allosteric sites based on reversed allosteric communication. This method enabled the identification of a previously uncharacterized potential cryptic allosteric site on Sirt6, which provides a starting point for allosteric drug design that can aid the identification of candidate pockets in other therapeutic targets.

Using reversed allosteric communication, we performed MD simulations, MSMs, and mutagenesis experiments, to discover allosteric sites. It reproduced the known allosteric site for MDL-801 on Sirt6 and uncovered a novel cryptic allosteric Pocket X.     

Search for hyperdeformed structures populated in the <Superscript>37</Superscript>Cl+<Superscript>120</Superscript>Sn reaction by using EUROBALL III

The ridge structure with ΔE_γ=±30 keV, observed in the past in coincidence with protons emitted in the reaction 187 MeV ³⁷Cl +¹²⁰Sn and attributed to an hyperdeformed nuclear shape in ¹⁵²Dy, has been studied in a new experiment performed with the EUROBALL III array. The ridge is now observed in coincidence with transitions in the yrast superdeformed band of ¹⁵²Dy but no discrete rotational bands have been identified. Received: 7 February 2000     

Organic-Inorganic Sol-Gel Hybrids with Ionic Properties

Summary.  A hybrid silicon precursor (ICS-PPG) obtained by reaction of 3-isocyanatopropyltriethoxy silane with poly-(propyleneglycol)-bis-(2-aminopropyl ether) was recognized as a potential host for various salts and molecular species. It has been used for electrochromic, gasochromic, photovoltaic, and fuel cell applications. This focuses on proton conducting gels (PWA/ICS-PPG, SiWA/ICS-PPG, and W-PTA/ICS-PPG) obtained after the incorporation of polyoxometalates in the ICS-PPG host. IR spectroscopic measurements are used to reveal the entrapment, the aggregation, and the interactions of W-PTA, PWA, or SiWA with the sol-gel derived network. The proton conductivity of the composites, measured using impedance spectroscopy, increases with increasing concentration of the polyoxometalates from 10⁻⁶ to 10⁻³ S/cm. Received June 23, 2000. Accepted (revised) September 18, 2000     

Modulation instability analysis,optical and other solutions to the modified nonlinear Schrödinger equation

This paper studies the new families of exact traveling wave solutions with the modified nonlinear Schrödinger equation, which models the propagation of rogue waves in ocean engineering. The extended Fan sub-equation method with five parameters is used to find exact traveling wave solutions. It has been observed that the equation exhibits a collection of traveling wave solutions for limiting values of parameters. This method is beneficial for solving nonlinear partial differential equations, because it is not only useful for finding the new exact traveling wave solutions, but also gives us the solutions obtained previously by the usage of other techniques (Riccati equation, or first-kind elliptic equation, or the generalized Riccati equation as mapping equation, or auxiliary ordinary differential equation method) in a combined approach. Moreover, by means of the concept of linear stability, we prove that the governing model is stable. 3D figures are plotted for showing the physical behavior of the obtained solutions for the different values of unknown parameters with constraint conditions.     

Preclassification of Broadband and Sparse Infrared Data by Multiplicative Signal Correction Approach

Preclassification of raw infrared spectra has often been neglected in scientific literature. Separating spectra of low spectral quality, due to low signal-to-noise ratio, presence of artifacts, and low analyte presence, is crucial for accurate model development. Furthermore, it is very important for sparse data, where it becomes challenging to visually inspect spectra of different natures. Hence, a preclassification approach to separate infrared spectra for sparse data is needed. In this study, we propose a preclassification approach based on Multiplicative Signal Correction (MSC). The MSC approach was applied on human and the bovine knee cartilage broadband Fourier Transform Infrared (FTIR) spectra and on a sparse data subset comprising of only seven wavelengths. The goal of the preclassification was to separate spectra with analyte-rich signals (i.e., cartilage) from spectra with analyte-poor (and high-matrix) signals (i.e., water). The human datasets 1 and 2 contained 814 and 815 spectra, while the bovine dataset contained 396 spectra. A pure water spectrum was used as a reference spectrum in the MSC approach. A threshold for the root mean square error (RMSE) was used to separate cartilage from water spectra for broadband and the sparse spectral data. Additionally, standard noise-to-ratio and principle component analysis were applied on broadband spectra. The fully automated MSC preclassification approach, using water as reference spectrum, performed as well as the manual visual inspection. Moreover, it enabled not only separation of cartilage from water spectra in broadband spectral datasets, but also in sparse datasets where manual visual inspection cannot be applied.     

GC–MS Analysis and In Vivo and Ex Vivo Antidiarrheal and Antispasmodic Effects of the Methanolic Extract of Acacia nilotica

This present study evaluated and rationalized the medicinal use of the fruit part of Acacia nilotica methanolic extract. The phytochemicals were detected using gas chromatography–mass spectrometry (GC–MS) while the in vivo antidiarrheal test was done using Swiss albino mice. To determine the details of the mechanism(s) involved in the antispasmodic effect, isolated rat ileum was chosen using different ex vivo assays by maintaining a physiological environment. GC–MS results showed that A. nilotica contained pyrogallol as the major polyphenol present (64.04%) in addition to polysaccharides, polyphenol, amino acid, steroids, fatty acid esters, and triterpenoids. In the antidiarrheal experiment, A. nilotica inhibited diarrheal episodes in mice significantly (p < 0.05) by 40% protection of mice at 200 mg/kg, while 80% protection was observed at 400 mg/kg by the orally administered extract. The highest antidiarrheal effect was observed with loperamide (p < 0.01), used as a control drug. In the ex vivo experiments, A. nilotica inhibited completely in increasing concentrations (0.3 to 10 mg/mL) the carbachol (CCh; 1 µM) and high K⁺ (80 mM)-evoked spasms in ileum tissues at equal potencies (p > 0.05), similar to papaverine, a dual inhibitor of the phosphodiesterase enzyme (PDE) and Ca⁺⁺ channels. The dual inhibitory-like effects of A. nilotica on PDE and Ca⁺⁺ were further validated when A. nilotica extract (1 and 3 mg/mL)-pre-incubated ileum tissues potentiated and shifted isoprenaline relaxation curves towards lower doses (leftward), similar to papaverine, thus confirming the PDE inhibitory-like mechanism whereas its CCB-like effect of the extract was confirmed at 3 and 5 mg/mL by non-specific inhibition of CaCl₂-mediated concentration response curves towards the right with suppression of the maximum peaks, similar to verapamil, used as standard CCB. Thus, this study characterized the chemical composition and provides mechanistic support for medicinal use of A. nilotica in diarrheal and hyperactive gut motility disorders.     

Unusual isospin-breaking and isospin-mixing effects in the A=35 mirror nuclei

Excited states have been studied in 35Ar following the 16O(24Mg,1alpha1n)35Ar fusion-evaporation reaction at 60 MeV using the Ge-detector array GASP. A comparison with the mirror nucleus 35Cl shows two remarkable features: (i) A surprisingly large energy difference for the 13/2(-) states, in which the hitherto overlooked electromagnetic spin-orbit term is shown to play a major role, and (ii) a very different decay pattern for the 7/2(-) states, which provides direct evidence of isospin mixing.     

Reaction mechanism studies using the CN/ER spin distribution

To study basic properties of the fusion reaction dynamics for heavy compound systems the partial-wave distribution can be employed as an alternative to the classically used fusion/fission excitation functions. A variety of reactions leading to compound nuclei (CN) in the Pb region can be used to investigate features like the fusion-fission competition, the role of deformation in the fusion of heavy systems and a possible effect of the Z = 82 shell on the enhancement of evaporation residue (ER) production.Received: 5 November 2002, Revised: 26 March 2003, Published online: 9 March 2004PACS: 24.75. + i General properties of fission - 25.70.Gh Compound nucleus - 25.70.Jj Fusion and fusion-fission reactions