The Degree of Disorder in Hardwood Kraft Pulps Studied by Means of LODP

The amount of disordered material in two types of hardwood kraft pulps was estimated by determining the weight loss at the point where the levelling-off degree of polymerisation (LODP) was reached. The pulps used were commercial pulps viz (1)one conventional birch kraft and (2)one mixed hardwood (MHW) kraft pulp that had been prehydrolysed prior to cooking. The results indicated that the hemicellulose xylan is closely associated with the cellulose in commercial birch pulps. It is therefore only possible to use LODP as a measure of the crystallite length of hardwood cellulose in highly purified pulps, such as prehydrolysed kraft pulp. A model explaining the LODP-results is proposed.     

Isolierung und struktur des dreikernigen hexamethylbenzolzirkonium-komplexes [(Me6C6)3Zr3Cl6]2+ [(Al2Cl7)−]2

Crystals of the trinuclear complex [(Me₆C₆)₃Zr₃Cl₆][Al₂Cl₇]₂ have been obtained from the reaction of ZrCl₄, hexamethylbenzene, AlCl₃, and Al in benzene. They are monoclinic, space group C2/2, with Z  4 and lattice parameters a 14.167(3), b 27.779(7), c 15.721(3) Å and β 94.27(4)°. The Zr atoms form a regular triangle. Each pair of Zr atoms is bridged by two Cl atoms. The fifth coordination site of each Zr atom is occupied by a h⁶-Me₆C₆ group. The cation is almost isostructural with the known trinuclear cation [(Me₆C₆)₃Nb₃Cl₆]²⁺. Important distances are: ZrZr 3.35, ZrCl 2.56, and Zrcenter of C₆ ring 2.17 Å. One of the two independent [Al₂Cl₇]^? anions occurs in a staggered conformation and one occurs in an eclipsed conformation.     

Insights into sulfinate formation from tosyl hydrazides

Benzylation of 1,2-ditosylhydrazine in DMF under various basic conditions results in a benzyl sulfone via intermediary sulfinate formation, providing new insights and allowing practical conclusions to be drawn. The half-lives of 1,2-ditosylhydrazine and several monotosylated hydrazides with 1,1,3,3-tetramethylguanidine in DMSO have been determined by ¹H NMR spectroscopy and are found to vary from a few minutes to several months. In the course of this work a benzylated, partly detosylated compound has been identified and a 1,1,3,3-tetramethyl guanidine-containing side-product characterized. A contradictory report is also commented on.     

QSAR with experimental and predictive distributions: an information theoretic approach for assessing model quality

We propose that quantitative structure–activity relationship (QSAR) predictions should be explicitly represented as predictive (probability) distributions. If both predictions and experimental measurements are treated as probability distributions, the quality of a set of predictive distributions output by a model can be assessed with Kullback–Leibler (KL) divergence: a widely used information theoretic measure of the distance between two probability distributions. We have assessed a range of different machine learning algorithms and error estimation methods for producing predictive distributions with an analysis against three of AstraZeneca’s global DMPK datasets. Using the KL-divergence framework, we have identified a few combinations of algorithms that produce accurate and valid compound-specific predictive distributions. These methods use reliability indices to assign predictive distributions to the predictions output by QSAR models so that reliable predictions have tight distributions and vice versa. Finally we show how valid predictive distributions can be used to estimate the probability that a test compound has properties that hit single- or multi- objective target profiles.     

Multiscale Modeling of the Active Site of [Fe] Hydrogenase: The H2 Binding Site in Open and Closed Protein Conformations

A series of QM/MM optimizations of the full protein of [Fe] hydrogenase were performed. The FeGP cofactor has been optimized in the water‐bound resting state ( 1 ), with a side‐on bound dihydrogen ( 2 ), or as a hydride intermediate ( 3 ). For inclusion of H₄ MPT in the closed structure, advanced multiscale modeling appears to be necessary, especially to obtain reliable distances between CH‐H₄MPT⁺ and the dihydrogen (H₂) or hydride (H^?) ligand in the FeGP cofactor. Inclusion of the full protein is further important for the relative energies of the two intermediates 2 and 3 . We finally find that hydride transfer from 3 has a significantly higher barrier than found in previous studies neglecting the full protein environment.