Quantitative analysis of photoelectron angular distribution of single-domain organic monolayer film: NTCDA on GeS(0 0 1)

Angle-resolved photoelectron spectra were measured for a single-domain monolayer film of naphthalene-1,4,5,8-tetracarboxylic dianhydride (NTCDA) prepared on a cleaved GeS(0 0 1) surface using synchrotron radiation. The observed photoelectron angular distributions were analyzed by a calculation using the single-scattering approximation combined with molecular orbital calculation. With the help of the low-energy electron diffraction pattern, the structure of the NTCDA monolayer on GeS(0 0 1) was estimated quantitatively.     

C-H to N substitution dramatically alters the sequence-specific DNA alkylation, cytotoxicity, and expression of human cancer cell lines

We designed and synthesized sequence-specific alkylating conjugates 1 and 2, which selectively alkylate matched sequences at nanomolar concentrations. Conjugates 1 and 2 differ only in that the C-H is substituted by an N in the second ring, which precisely recognizes and effectively alkylates DNA according to the recognition rule of Py-Im polyamides. We investigated sequence-specific DNA alkylation, cytotoxicity in 39 human cancer cell lines, and the effect on expression levels in cancer cell lines by Py-Im conjugates 1 and 2. The COMPARE analysis of the mean graphs showed that conjugates 1 and 2 did not correlate well with each other (r = 0.65) despite having a common DNA alkylating mechanism (purine N3 alkylation). Array-based gene expression analysis demonstrated that there are several oppositely regulated genes. The results suggest the intriguing possibility that DNA alkylating agents recognizing longer base-pair sequences may provide a promising approach for developing new types of antigene agents.     

Chelating behavior of new chelating resins derived from n-(o-hydroxybenzyl)iminodiacetic acid

The chelating behavior of a new resin prepared by polycondensation of N-(o-hydroxybenzyl) iminodiacetic acid (o-HDA) with phenol and formaldehyde, is compared with that of the monomer, with p-HDA resin and p-HDA monomer, and with Chelex-100. The order of chelate stability for the o-HDA resin is Cu(II) > Ni(II) > Zn(II) > Co(II). An unusually high stability of the o-HDA and o-HDA resin iron(III) chelates in acidic solution is attributed to the participation of the o-hydroxyl group in the coordination process.     

Synthesis and properties of novel fluoroalkyl end‐capped oligomers having adamantane units in the main chains via a radical process

Fluoroalkanoyl peroxides were reacted with adamantane in the presence of radical polymerizable monomers such as acrylic acid, acryloylmorpholine, and N,N‐dimethylacrylamide to afford fluoroalkyl end‐capped oligomers having adamantane units in the main chains via a radical process under very mild conditions. Thermal stability of these new fluorinated adamantane co‐oligomers thus obtained became higher than that of the corresponding fluorinated homo‐oligomers having no adamantane units. Interestingly, these fluorinated adamantane co‐oligomers exhibited good solubility in traditional organic solvents such as methanol, ethanol, tetrahydrofuran, chloroform, benzene, dimethylsulfoxide and N,N‐dimethylformamide including water, although the parent adamantane exhibited no solubility in water, methanol and dimethylsulfoxide. Furthermore, these adamantane co‐oligomers were able to reduce the surface tension effectively to form the nanometer size‐controlled self‐assembled fluorinated molecular aggregates. Copyright © 2005 John Wiley & Sons, Ltd.     

Study of salt permeation process into Vigna angularis using Ag/AgCl electrodes

In this work we report a novel method that can monitor in vivo the salt permeation process into a plant Vigna angularis using two Ag/AgCl electrodes. The method is based on the electromotive force (emf) measurement using two Ag/AgCl electrodes, one inserted into the V. angularis pith cavity and the other placed into saline ([NaCl]=1 M) surrounding the roots. Temporary change of emf ranging from 0 to ca. 0.115 V was measured in vivo using the system, and the possible physiological phenomenon during the period was discussed.     

Optically active copolyamides by melt and solution condensation polymerization

The melt and solution condensation copolymerization of nylon salts which were prepared from d-camphoric acid and adipic acid with hexamethylenediamine were carried out, and optically active copolyamides were obtained. The copolyamides obtained had a positive specific rotation. The specific rotations for the copolyamides increased with increasing content of d-camphoryl units in the copolymers. The optical rotatory dispersion of the copolyamides had positive curves and were found to fit the simple Drude equation. The λ_c values of the polymers obtained by the melt and solution condensation polymerization were 241 mμ and 245 mμ, respectively.     

Influences of fatty acid moiety and esterification of polyglycerol fatty acid esters on the crystallization of palm mid fraction in oil-in-water emulsion

We examined the crystallization of palm mid fraction (PMF) in oil-in-water (O/W) emulsion, after adding polyglycerol fatty acid esters (PGFEs). We employed ultrasonic velocity measurements and DSC techniques, with special emphases on the influences of fatty acid moiety and esterification of PGFE. Twelve types of PGFEs were examined as additives. PGFEs have a large hydrophilic moiety composed of 10 glycerol molecules to which palmitic, stearic and behenic acids were esterified as the fatty acid moiety with different degrees of esterification. Crystallization temperature (T(c)) of PMF remarkably increased with increasing concentrations of the PGFEs as the chain length of the fatty acid moiety increased, and the PGFE became more hydrophobic in accordance with increasing degree of esterification. We observed that the heterogeneous nucleation of PMF in the O/W emulsion was activated at the oil-water interface, where the template effect of very hydrophobic long saturated fatty acid chains of the PGFE might play the main role of heterogeneous nucleation.     

Cyclophanes as hosts for aromatic and aliphatic guests

A series of water-soluble cyclophanes, made by connecting two diarylmethane units and two bridging chains via four nitrogens, were found to provide hydrophobic cavities of definite shape and size for forming inclusion complexes with various organic compounds in aqueous solution. Some chemical modifications of these cyclophanes are described.This paper is dedicated to Professor D. J. Cram to celebrate his honor in receiving the 1987 Nobel Prize in Chemistry.     

Separation of stereoisomers of some terpene derivatives by capillary gas chromatography-mass spectrometry and high-performance liquid chromatography using beta-cyclodextrin derivative columns

Gas chromatographic separations of the stereoisomers of menthol derivatives, important intermediates in the synthesis of physiologically active natural products, were carried out on several substituted beta-cyclodextrin (CD) columns, including per-O-methyl-beta-cyclodextrin (PME-beta-CD), heptakis(2,3-di-O-acetyl-6-tert-butyldimethylsilyl)-beta-CD (DIAC-6-TBDS-beta-CD), and heptakis(2,3-di-O-methyl-6-tert-butyldimethylsilyl)-beta-CD (DIME-6-TBDS-beta-CD) as chiral stationary phases (CSPs). With the DIME-6-TBDS-beta-CD column, a separation of the Z- and E-isomers of methylidenementhol was accomplished; no separation was achieved with the other columns. The stereoisomers of methylidenementhol and the corresponding tert-butyldimethylsilyl (TBS) ether were separated on both the beta-CD and the heptakis(2,3,6-tri-O-methyl)-beta-cyclodextrin (TME-beta-CD) columns by high-performance liquid chromatography (HPLC) with a mobile phase involving acetonitrile and H(2)O. For the separation of the Z- and E-isomers of methylidenementhol, the TME-beta-CD column was superior. In contrast, the beta-CD column was preferable in the case of the corresponding TBS ether.     

Self-organized glycoclusters along DNA: effect of the spatial arrangement of galactoside residues on cooperative lectin recognition

We describe herein the relationship between the spatial arrangement of self-organized galactose clusters and lectin recognition. beta-Galactose-modified deoxyuridine phosphoramidite was synthesized and applied to solid-phase synthesis to provide 18-, 20-, and 22-mers of site-specifically galactosylated oligodeoxynucleotides (Gal-ODNs). These Gal-ODNs were self-organized through hybridization with the corresponding 18-, 20-, and 22-mers of half-sliding complementary ODNs (hsc-ODNs) to give periodic galactoside clusters. The self-organization of ODNs was confirmed by size exclusion chromatography and gel electrophoresis. The binding of the Gal-clusters to the FITC-labeled RCA(120) lectin was analyzed by monitoring the change in fluorescence intensity. The assembly of 20-mer Gal-ODN with the 20-mer hsc-ODN was strongly and cooperatively recognized by the lectin. The 18-mer assembly was bound more weakly and less cooperatively, and the 22-mer assembly was minimally bound to the lectin. RCA(120) lectin recognized not only the density of galactoside residues, but also the spatial arrangement. The size of the Gal cluster was estimated from the association constant of Gal-ODN with hsc-ODN. The relationship between lectin-recognition and Gal-cluster size is also discussed.