Terpenoic acid glycerides from the dorid nudibranch Archidoris montereyensis

Extracts of the dorid nudibranch $\text{Archidoris montereyensis}$ contain a diterpenoic acid glyceride 1 whose structure has been determined by x-ray diffraction analysis. The structure of a minor metabolite, the sesquiterpenoic acid glyceride 2, was determined by chemical correlation.     

Microcolumns with self-assembled particle frits for proteomics

LC-MS-MS experiments in proteomics are usually performed with packed microcolumns employing frits or outlets smaller than the particle diameter to retain the packing material. We have developed packed microcolumns using self-assembled particles (SAPs) as frits that are smaller than the size of the outlet. A five to one ratio of outlet size to particle diameter appears to be the upper maximum. In these situations the particles assembled into an arch over the outlet like the stones in a stone bridge. When 3 microm particles were packed into a tapered column with an 8 microm outlet, two particles bridged the outlet with 0.3 pl dead volume and perfect success rate. In peptide analysis by LC-MS, the peak width at half height was normally less than 6 s, compared to 12 s without SAPs. The LC-MS-MS system provided 37% sequence coverage (21 matched peptides) for a tryptically-digested sample of 10 fmol bovine serum albumin. We also describe application of the SAP principle to make disposable pipette tip columns with short pieces of fused-silica capillary as the outlet.     

Infrared Emission Spectroscopic Study of the Dehydroxylation via Surface Silanol Groups of Synthetic and Natural Beidellite

The structural changes of synthetic and natural beidellites during dehydroxylation have been studied using infrared emission spectroscopy of the OH-stretching and bending regions. The OH-stretching region is characterized by two OH-stretching modes around 3600-3615 cm-1 and around 3650 cm-1. These bands strongly decrease in intensity upon dehydroxylation up to 600 degrees C for the natural beidellite and 700-750 degrees C for the synthetic ones. The differences in bandwidth, intensity, and dehydroxylation behavior are interpreted as due to differences in crystallinity with crystallinity increasing in the order natural beidellite < synthetic beidellite BSK3 < synthetic beidellite E498. Above 400 degrees C a new band attributed to silanol groups becomes visible in all samples due to transfer of the hydroxyls from the octahedral layer to the siloxane layer before they are lost. The broad band around 3300-3400 cm-1 is assigned to both H-bonding in H2O and H-bonding to Si-O-Al linkages. The presence of two different OH groups is also reflected in the OH-bending modes around 875-895 cm-1 and 915-925 cm-1 and in the OH-libration modes around 780 and 800-820 cm-1. These bands show a decrease in intensity upon heating and dehydroxylation of the clay structure. Here again the same order can be observed for the disappearance of the bands as for the OH-stretching region. Copyright 1999 Academic Press.     

Pseudochelin A,a siderophore of Pseudoalteromonas piscicida S2040

A new siderophore containing a 4,5-dihydroimidazole moiety was isolated from Pseudoalteromonas piscicida S2040 together with myxochelins A and B, alteramide A and its cycloaddition product, and bromo- and dibromoalterochromides. The structure of pseudochelin A was established by spectroscopic techniques including 2D NMR and MS/MS fragmentation data. In bioassays selected fractions of the crude extract of S2040 inhibited the opportunistic pathogen Pseudomonas aeruginosa. Pseudochelin A displayed siderophore activity in the chrome azurol S assay at concentrations higher than 50 μM, and showed weak activity against the fungus Aspergillus fumigatus, but did not display antibacterial, anti-inflammatory or anticonvulsant activity.     

Size‐Dependence of the Melting Temperature of Individual Au Nanoparticles

Nanoparticles have an immense importance in various fields, such as medicine, catalysis, and various technological applications. Nanoparticles exhibit a significant depression in melting point as their size goes below ≈10 nm. However, nanoparticles are frequently used in high temperature applications such as catalysis where temperatures often exceed several 100 degrees which makes it interesting to study not only the melting temperature depression, but also how the melting progresses through the particle. Using high‐resolution transmission electron microscopy, the melting process of gold nanoparticles in the size range of 2–20 nm Au nanoparticles combined with molecular dynamics studies is investigated. A linear dependence of the melting temperature on the inverse particle size is confirmed; electron microscopy imaging reveals that the particles start melting at the surface and the liquid shell formed then rapidly expands to the particle core.     

Reduction of the Δ13-15-Keto Grouping of Prostaglandin Intermediates

In an attempt to gain further information on a stereo-structural model for activity of prostaglandins,² we undertook the synthesis of a number of new analogues.³ In particular, 17,17-dimethyl-F₂α was chosen as a good test of the “hairpin” conformation because the two 17-methyl groups would prevent side chain alignment in the particular sense of the “hairpin” model.⁴     

A Convenient Synthesis 7,8-Dihydroisoquinolin-5(6H)-One

A new high-yield two step synthesis of 7,8-dihydroisoquinolin-5(6H)-one (3) from 5,6,7,8-tetrahydroisoquinoline (1) is described.     

Aggressive dereplication using UHPLC–DAD–QTOF: screening extracts for up to 3000 fungal secondary metabolites

In natural-product drug discovery, finding new compounds is the main task, and thus fast dereplication of known compounds is essential. This is usually performed by manual liquid chromatography-ultraviolet (LC-UV) or visible light-mass spectroscopy (Vis-MS) interpretation of detected peaks, often assisted by automated identification of previously identified compounds. We used a 15 min high-performance liquid chromatography–diode array detection (UHPLC–DAD)–high-resolution MS method (electrospray ionization (ESI)⁺ or ESI^?), followed by 10–60 s of automated data analysis for up to 3000 relevant elemental compositions. By overlaying automatically generated extracted-ion chromatograms from detected compounds on the base peak chromatogram, all major potentially novel peaks could be visualized. Peaks corresponding to compounds available as reference standards, previously identified compounds, and major contaminants from solvents, media, filters etc. were labeled to differentiate these from compounds only identified by elemental composition. This enabled fast manual evaluation of both known peaks and potential novel-compound peaks, by manual verification of: the adduct pattern, UV–Vis, retention time compared with log D, co-identified biosynthetic related compounds, and elution order. System performance, including adduct patterns, in-source fragmentation, and ion-cooler bias, was investigated on reference standards, and the overall method was used on extracts of Aspergillus carbonarius and Penicillium melanoconidium, revealing new nitrogen-containing biomarkers for both species.