A distance-controlled oligopeptide linker as a novel photo-induced energy transfer switch by secondary structural transition

By using an oligopeptide chain as a functional linker and introducing coumarin 2 and coumarin 343 at the chain ends, an effective photo-induced energy transfer system was constructed and energy transfer from coumarin 2 to coumarin 343 was switched on and off by a solvent-induced helix-coil secondary transition of the oligopeptide chain.     

Structures of a CO adlayer on a Pt(100) electrode in HClO4 solution studied by in situ STM

We have obtained the first in situ STM atomic images of a CO adlayer on a Pt(100)-(1 x 1) electrode in 0.1 M HClO(4) solution, exhibiting a phase transition from c(6 x 2)-10CO to c(4 x 2)-6CO at E > 0.3 V vs. RHE.     

Resistance properties of a macroporous silica-based N,N,N′,N′-tetraoctyl-3-oxapentane-1,5-diamide-impregnated polymeric adsorption material against nitric acid, temperature and γ-irradiation

The resistance of a novel silica-based N,N,N′,N′-tetraoctyl-3-oxapentane-1,5-diamide (TODGA) polymeric adsorption material (TODGA/SiO₂-P) against nitric acid, temperature and γ-irradiation had been investigated. The adsorption property of the treated TODGA/SiO₂-P was evaluated by a 3 M HNO₃ solution containing 0.01 M Nd(III). It was found that both 3 and 0.01 M HNO₃ concentrations did not decrease the stability of TODGA/SiO₂-P at 25°C. The quantity of TODGA leaked from TODGA/SiO₂-P was equivalent to its solubility in the corresponding HNO₃ aqueous solution. The effect of 3 M HNO₃ on the leakage of TODGA at 80°C was significantly higher than that in 0.01 M HNO₃ as well as in all cases at 25°C. The amount of Nd(III) adsorbed towards the treated TODGA/SiO₂-P was determined in the range of 0.143–0.148 mmol/g for the HNO₃ concentration effect and 0.142–0.0506 mmol/g for the temperature effect. γ-Irradiation showed a more noticeable destruction effect on TODGA/SiO₂-P. The content of TODGA leaked increased with an increase in the γ-irradiation dose (ID) from 1.06 to 3.72 MGy in terms of the linear equation [TODGA]=794.5ID+84.0. The amount of Nd(III) adsorbed onto the irradiated TODGA/SiO₂-P decreased rapidly from 0.134 to 0.0438 mmol/g, which was lower than 0.153 mmol/g, the adsorption of fresh TODGA/SiO₂-P for Nd(III), according to the equation Q_Nd(III)=−0.0301ID+0.160, showing that a large quantity of TODGA leaked from TODGA/SiO₂-P. The adsorbed amount of Nd(III) decreased obviously in this order: the HNO₃ concentration effect, temperature effect and γ-irradiation.     

Y-931, a novel atypical antipsychotic drug,is less sensitive to oxidative phenomena

The oxidation behavior of Y-931, a potent atypical antipsychotic drug, was compared with that of clozapine and olanzapine. In two enzymatic systems (horseradish peroxidase (HRP)/glutathione (GSH) and HRP/H(2)O(2)/GSH) which generate thiyl radicals, clozapine markedly strengthened the electron paramagnetic resonance (EPR) signal for the radical. Olanzapine, Y-931 and the major metabolites (compounds 1-3) had no or minimal effect on the intensity of this signal. In addition, the redox potential values for the three derivatives were in accord with the EPR spin trapping results. In toxicological experiments in human leukocytes, a concentration-dependent toxicity was observed when neutrophils were incubated with clozapine (1-10 micromol/l) and H(2)O(2) (1 mmol/l). However, Y-931 and olanzapine did not show remarkable toxicity under the conditions.     

Superconducting Properties in Metallic Phase of NbS3

Metallic phase of NbS₃ was synthesized by heating the crystal of semiconducting NbS₃. Metallic NbS₃ undergoes superconducting transition around 2 K. The analysis of the angular dependence of the upper critical magnetic field suggests that the effect of filmy or fibrous morphology plays an important role in the superconducting properties.     

Single-Round DNA Aptamer Selection by Combined Use of Capillary Electrophoresis and Next Generation Sequencing: An Aptaomics Approach for Identifying Unique Functional Protein-Binding DNA Aptamers

In DNA aptamer selection, existing methods do not discriminate aptamer sequences based on their binding affinity and function and the reproducibility of the selection is often poor, even for the selection of well-known aptamers like those that bind the commonly used model protein thrombin. In the present study, a novel single-round selection method (SR-CE selection) was developed by combining capillary electrophoresis (CE) with next generation sequencing. Using SR-CE selection, a successful semi-quantitative and semi-comprehensive aptamer selection for thrombin was demonstrated with high reproducibility for the first time. Selection rules based on dissociation equilibria and kinetics were devised to obtain families of analogous sequences. Selected sequences of the same family were shown to bind thrombin with high affinity. Furthermore, data acquired from SR-CE selection was mined by creating sub-libraries that were categorized by the functionality of the aptamers (e. g., pre-organized aptamers versus structure-induced aptamers). Using this approach, a novel fluorescent molecular recognition sensor for thrombin with nanomolar detection limits was discovered. Thus, in this proof-of-concept report, we have demonstrated the potential of a “DNA Aptaomics” approach to systematically design functional aptamers as well as to obtain high affinity aptamers.     

A longitudinal view of mathematics achievement of primary students: case studies from Japan, Singapore, and the United States

This paper shares results from a secondary analysis of data from the participation of Japanese, Singaporean, and U.S. students in the International Project on Mathematical Attainment (IPMA). IPMA was a longitudinal study to assess the mathematics achievement of primary students from their first year of schooling through the end of fifth grade. Tests were constructed to enable achievement on the same items to be assessed over multiple years, thus permitting the assessment of growth in achievement throughout primary school. Achievement is compared to the grade at which the content is introduced so that achievement can be related to students’ opportunity to learn.     

An analytical method for measuring α‐amylase activity in starch‐containing foods

The quality of starch‐containing foods may be significantly impaired by contamination with very small amounts of α‐amylase, which can enzymatically hydrolyze the starch and cause viscosity loss. Thus, for quality control, it is necessary to have an analytical method that can measure low amylase activity. We developed a sensitive analytical method for measuring the activity of α‐amylase (from Bacillus subtilis) in starch‐containing foods. The method consists of six steps: (1) crude extraction of α‐amylase by centrifugation and filtration; (2) α‐amylase purification by desalting and anion‐exchange chromatography; (3) reaction of the purified amylase with boron‐dipyrromethene (BODIPY)‐labeled substrate, which releases a fluorescent fragment upon digestion of the substrate, thus avoiding interference from starch derivatives in the sample; (4) stopping the reaction with acetonitrile; (5) reversed‐phase solid‐phase extraction of the fluorescent substrate to remove contaminating dye and impurities; and (6) separation and measurement of BODIPY fluorescence by HPLC. The proposed method could quantify α‐amylase activities as low as 10 mU/mL, which is enough to reduce the viscosity of starch‐containing foods. Copyright © 2012 John Wiley & Sons, Ltd.