Evaluation of the surface free energy of spin‐coated photodefinable epoxy

The surface free energy of crosslinked photodefinable epoxy (PDE) was evaluated from the advancing contact angles measured by the sessile drop method. Poly(tetrafluoroethylene) (PTFE) was used as a reference material in the evaluation of the surface free energies by various models. Pure water, diiodomethane, formamide, ethylene glycol, diethylene glycol, glycerol, 1‐bromonaphthalene, decane, and tetradecane were used as the probing liquids. The surface free energies for PDE and PTFE were calculated to be 43.6 and 21.2 mJ/m², respectively. The contact‐angle measurements indicated the isotropy of the PDE surface with respect to the surface free energy. The PDE coating was further characterized with scanning electron microscopy and atomic force microscopy. The PDE surface was treated chemically and by reactive ion etching (RIE) to determine their impact on the wettability and adhesion. The treatments resulted in decreased contact angles between the crosslinked PDE surface and water as the polarity of the surface increased from about 9% to 18 and 43% by the chemical and RIE treatments, respectively. On the contrary, the surface free energy of the treated PDEs, as calculated by the geometric mean model, did not change markedly (to 47.4 and 41.8 mJ/m² by the chemical and RIE treatments, respectively). Consequently, the contact angles of diiodomethane and the PDE solution on the treated surfaces did not decrease noticeably. The stud‐pull test showed improved adhesion strength for PDE that was left less crosslinked and, therefore, had residual affinity against the sequential PDE layer. © 2002 Wiley Periodicals, Inc. J Polym Sci Part B: Polym Phys 40: 2137–2149, 2002     

Transformationen von Fourier-Reihen durch monoton abnehmende Multiplikatoren

Ohne ZusammenfassungVorgelegt vonG. Alexits     

Reversible interconversion of thiazolidine-tetrahydrothiazine in the thiadiazabicyclooctanone system

Summary The interconversion of thiazolidine-tetrahydrothiazine in some derivatives of thiadiazabicyclooctanone in aqueous HCl has been studied. In the case of 6- and 7-substituted hydroxy or methoxy thiadiazabicyclooctanone a reversible rearrangement was found. The sulfoxide of thiadiazabicyclooctanone under the same reaction conditions undergoes epimerisation, while reaction with PCl₅ — via a corresponding sulfenyl chloride — affords a mixture of 6-and 7-substituted hydroxy or methoxy derivatives of thiadiazabicyclooctanone.The authors dedicate this paper to Dr. B. Gapert for his 60th birthday     

Combined X-ray diffraction and QM/MM study of the Burkholderia cepacia lipase-catalyzed secondary alcohol esterification

To understand the origin of high enantioselectivity of Burkholderia cepacia lipase (BCL) toward secondary alcohol, (R,S)-1-phenoxy-2-hydroxybutane (1), and its ester (E1), we determined the crystal structure of BCL complexed with phosphonate analogue of S-E1 and accomplished a series of MM, MC, and QM/MM studies. We have found that the inhibitor in the S configuration binds into the BCL active site in the same manner as the R isomer, with an important difference: while in case of the R-inhibitor the H-bond between its alcohol oxygen and catalytic His286 can be formed, in the case of the S-inhibitor this is not possible. Molecular modeling for both E1 enantiomers revealed orientations in which all hydrogen bonds characteristic of productive binding are formed. To check the possibility of chemical transformation, four different orientations of the substrate (two for each enantiomer) were chosen, and a series of ab initio QM/MM calculations were accomplished. Starting from the covalent complex, we modeled the ester (E1) hydrolysis and the alcohol (1) esterification. The calculations revealed that ester release is possible starting with all four covalent complexes. Alcohol release from the BCL-E1 complex in which the S-substrate is bound in the same manner as the S-inhibitor in the crystal structure however is not possible. These results show that the crystallographically determined binding modes should be taken with caution when modeling chemical reactions.     

Determination of alkenes in cracking products by normal-phase high-performance liquid chromatography–diode array detection

Alkene content determinations in fluid catalytic cracking (FCC) liquid products were performed by means of normal-phase high-performance liquid chromatography (NP-HPLC) with diode array detection (UV/DAD). Separation of alkenes from aromatic hydrocarbons was performed on amino-modified silica gel column with n-heptane as mobile phase. The column has a little affinity to alkenes and saturated hydrocarbons and a pronounced affinity to aromatic compounds. The problem of alkenes and saturates co-elution on this column type was overcome with the detection system, UV/DAD, sensitive and selective to alkenes, while saturates are inactive in UV field. Total alkene content was determined as a sum of mono- and dialkene groups quantified by external standard method. Validation and verification of the developed method proved their applicability. The following criteria were used to validate the HPLC–DAD method: selectivity, linearity, precision, limits of detection and quantification. Alkene contents were quantified with the external standard method of wide calibration range, so both low and high alkene contents can be determined by the single calibration. Correlation coefficients were higher than 0.99. Precision was evaluated as repeatability and intermediary precision with relative standard deviations less than 5%. Some structural investigation of alkene groups was performed to confirm the assumption. Proposed method was compared with certified NMR method. Six commercial motor gasoline samples were analyzed by these two methods. Obtained results indicate good agreement between alkene content determined by both methods. The developed method was applied to the determination of alkene content in liquid FCC products in the boiling range from 70 °C to 190 °C.     

The large scale conformational change of the human DPP III-substrate prefers the "closed" form

Human dipeptidyl peptidase III (DPP III) is a two domain metallo-peptidase from the M49 family. The wide interdomain cleft and broad substrate specificity suggest that this enzyme could experience significant conformational change. Long (>100 ns) molecular dynamics (MD) simulations of DPP III revealed large range conformational changes of the protein, suggesting the pre-existing equilibrium model for a substrate binding. The binding free energy calculations revealed tighter binding of the preferred synthetic substrate Arg-Arg-2-naphtylamide to the "closed" than to the "open" DPP III conformation. Our assumption that Asp372 plays a crucial role in the large scale interdomain closure was proved by the MD simulations of the Asp372Ala variant. During the same simulation time, the variant remained more "open" than the wild type protein. Apparently, Ala was not as efficient as Asp in establishing the interdomain interactions. According to the MM-PBSA calculations, the electrostatic component of the free energy of solvation turned out to be higher for the "closed" protein than for its less compact form. However, the gain in entropy due to water released from the interdomain cleft nicely balanced this negative effect.     

CD40mAb adjuvant induces a rapid antibody response that may be beneficial in post-exposure prophylaxis

Active vaccination can be effective as a post-exposure prophylaxis, but the rapidity of the immune response induced, relative to the incubation time of the pathogen, is critical. We show here that CD40mAb conjugated to antigen induces a more rapid specific antibody response than currently used immunological adjuvants, alum and monophosphoryl lipid A™.     

Calculating depth maps from digital holograms using stereo disparity

Depth extraction is an important aspect of three-dimensional (3D) image processing with digital holograms and an essential step in extended focus imaging and metrology. All available depth extraction techniques with macroscopic objects are based on variance; however, the effectiveness of this is object dependent. We propose to use disparity between corresponding points in intensity reconstructions to determine depth. Our method requires a single hologram of a scene, from which we reconstruct two different perspectives. In the reconstruction the phase information is not needed, which makes this method useful for in-line digital holography. To our knowledge disparity based 3D image processing has never been proposed before for digital holography.