Structural characterisation of tyrosine-nitrated peptides by ultraviolet and infrared matrix-assisted laser desorption/ionisation Fourier transform ion cyclotron resonance mass spectrometry

Nitration of tyrosine residues in proteins may occur in cells upon oxidative stress and inflammation processes mediated through generation of reactive nitroxyl from peroxynitrite. Tyrosine nitration from oxidative pathways may generate cytotoxic species that cause protein dysfunction and pathogenesis. A number of protein nitrations in vivo have been reported and some specific Tyrosine nitration sites have been recently identified using mass spectrometric methods. High-resolution Fourier transform ion cyclotron resonance mass spectrometry (MALDI) FT-ICR-MS) is shown here to be a highly efficient method in the determination of protein nitrations. Following the identification of nitration of the catalytic site Tyr-430 residue of bovine prostacyclin synthase, we synthesised several model peptides containing both unmodified tyrosine and 3-nitro-tyrosine residues, using solid-phase peptide synthesis (SPPS). The structures of the nitrotyrosine peptides were characterised both by ESI- and by matrix-assisted laser desorption/ionisation (MALDI)-FT-ICR-MS, using a standard ultraviolet (UV) nitrogen nitrogen laser and a 2.97 microm Nd-YAG infrared laser. Using UV-MALDI-MS, 3-nitrotyrosyl-peptides were found to undergo extensive photochemical fragmentation at the nitrophenyl group, which may hamper or prevent the unequivocal identification of Tyr-nitrations in cellular proteins. In contrast, infrared-MALDI-FT-ICR-MS did not produce fragmentation of molecular ions of Tyr-nitrated peptides.     

Composition and thermal stability of SiO2-based hybrid materials TEOS-MTEOS system

Hybrid materials with different amounts of organics permanently bound on the inorganic network obtained in the TEOS-MTEOS (tetraethoxysilan-methyltriethoxysilan) system are used for obtaining coatings with different optical and mechanical properties. To study the thermal stability of the mentioned materials, compositions with different molar ratios of the precursors were prepared. The influence of the solvent and water amounts on the gelation process was also investigated. The gels obtained were characterised by IR spectrometry and their decomposition temperatures were determined by DTA/TG. Thermal stability of the gels is rather influenced by their composition than the conditions of the gelation process. This revised version was published online in July 2006 with corrections to the Cover Date.     

Efficient synthesis of sulfonic,phosphoric, and phosphinic esters employing alkylating polymer-bound reagents

The efficient esterification of various sulfonic acids and sulfonates using polymer-bound triazenes based on the triazene T2 linker is described. Esterification of enantiopure alpha-substituted sodium sulfonates was performed in the presence of an alkylating resin without racemization. Racemization is a serious drawback in the esterification route via sulfonyl chlorides because of intermediate sulfene formation. To demonstrate the versatility of this protocol, phosphoric and phosphinic acids have been converted into the corresponding esters as well. All products were obtained in good yield and excellent purities without any further purification steps.     

A general organocatalyst for direct alpha-functionalization of aldehydes: stereoselective C-C, C-N, C-F, C-Br, and C-S bond-forming reactions. Scope and mechanistic insights

The development of a general organocatalyst for the alpha-functionalization of aldehydes, via an enamine intermediate, is presented. Based on optically active alpha,alpha-diarylprolinol silyl ethers, the scope and applications of this catalyst for the stereogenic formation of C-C, C-N, C-F, C-Br, and C-S bonds are outlined. The reactions all proceed in good to high yields and with excellent enantioselectivities. Furthermore, we will present mechanistic insight into the reaction course applying nonlinear effect studies, kinetic resolution, and computational investigations leading to an understanding of the properties of the alpha,alpha-diarylprolinol silyl ether catalysts.     

The Dynamic Behaviour and NMR Solution structures of complexes of the type (Bisphosphine)(cycloocta-1,5-diene)iridium(I) and the X-ray crystal structure of (cycloocta-1,5-diene)((−)-norphos)iridium(I) hexafluorophosphate

A square-planar coordination geometry was found for the complex [Ir(cod){(?)-norphos}][PF₆] ( 1b [PF₆]; cod = cylcoocta-1,5-diene and (?)-norphos = [(2R,3R)-8-9-10-trinorborn-5-ene-2,3-diyl]bis(diphenylphosphine)) in the solid state by X-ray diffraction. Crystal data: monoclinic, space group P2₁, a = 10.751 (6), b = 18.669(14), c = 12.037(8) Å, β = 114.82(5)°, Z = 2. A total structural assignment including the configurational and conformational aspects of this and the related compounds [Ir(bishosphine)(cod)]X (bisphosphine = (?)-chiraphos = (2S,3S)-2,3-bis(diphenylphosphino)butane and (?)-norphos, X = Cl, CF₃SO₃, or PF₆) was carried out in solution by one- and two-dimensional NMR spectroscopy. The complexes containing the CF₃SO₃^? and PF₆^? anions are four-coordinate cations with square-planar geometry, whereas the chlorides are five-coordinate neutral compounds showing solvent-dependent dynamic behaviour. In toluene, two diastereoisomers of [IrCl(cod){(?)-norphos}] ( 2b ) exist and interconvert slowly at room temperature. This interchange is fast in CDCl₃ solution, and it is likely to involve Cl dissociation and the formation of the cation [Ir(cod){(?)-norphos}]⁺ as an intermediate.     

Synthese und Charakterisierung funktionalisierter β‐Hydroxydithiozimtsäuren und deren Ester. Komplexchemisches Verhalten gegenüber Nickel(II), Palladium(II) und Platin(II)

Synthesis and Analytical Characterization of Functionalized β‐Hydroxydithiocinnamic Acids and their Esters. Complex Chemistry towards Nickel(II), Palladium(II), and Platin(II) Starting from silyl‐protected 4‐hydroxy acetophenone ( 1 ) the 1,1‐ethenedihiolato complexes 3 – 5 were synthesised using carbon disulfide and potassium‐tert‐butylate as a base. After being deprotected, the resulting 4‐hydroxy‐substituted complexes 6 – 8 were esterified with DL‐α‐lipoic acid to obtain the compounds 9 – 11 . The resulting complexes were characterized using NMR spectroscopy, mass spectrometry and IR spectroscopy. 3‐substituted β‐hydroxydithiocinnamic acid methyl ester ( 12 ) was obtained via an analogous path of reaction using silyl‐protected 3‐hydroxy acetophenone ( 2 ), carbon disulfide and methyl iodide. After removing of the silyl group the resulting hydroxy group was esterified with DL‐α‐lipoic acid. Using the dithioacid ester 14 as a ligand the Ni^II ( 15 ), Pd^II ( 16 ) and Pt^II ( 17 ) [O,S] complexes were obtained.     

Gel-phase 19F NMR spectral quality for resins commonly used in solid-phase organic synthesis; a study of peptide solid-phase glycosylations

The spectroscopic properties for seven different commercial resins used in solid-phase synthesis were investigated with (19)F NMR spectroscopy. A fluorine-labeled dipeptide was synthesized on each resin, and the resolution of the (19)F resonances in CDCl(3), DMSO-d(6), benzene-d(6) and CD(3)OD were measured with a conventional NMR spectrometer, i.e. without using magic angle spinning. In general, resins containing poly(ethylene glycol) chains (ArgoGel, TentaGel and PEGA) were found to be favorable for the (19)F NMR spectral quality. Three serine containing tri-, penta-, and heptapeptides were then prepared on an ArgoGel resin functionalized with a fluorine-labeled linker. The resin bound peptides were glycosylated utilizing a thiogalactoside glycosyl donor carrying fluorine-labeled protective groups. Monitoring of the glycosylations with gel-phase (19)F NMR spectroscopy allowed each glycopeptide to be formed in similar 80% yield, using a minimal amount of glycosyl donor (3 x 2 equivalents). In addition, it was found that the glycosylation yields were independent of peptide length.     

The critical probability for Voronoi percolation in the hyperbolic plane tends to 1/2

We consider percolation on the Voronoi tessellation generated by a homogeneous Poisson point process on the hyperbolic plane. We show that the critical probability for the existence of an infinite cluster tends to 1/2 as the intensity of the Poisson process tends to infinity. This confirms a conjecture of Benjamini and Schramm [5].     

Time-resolved vibrational spectroscopy

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Time-resolved vibrational spectroscopy