Validation of the anisotropy index ellipsoidal area ratio in diffusion tensor imaging

A new diffusion anisotropy index, ellipsoidal area ratio (EAR), was described recently and proved to be less noise-sensitive than fractional anisotropy (FA) by theory and simulation. Here we show that EAR has higher signal-to-noise ratios than FA in average diffusion tensor imaging data from 40 normal subjects. EAR was also more sensitive than FA in detecting white matter abnormalities in a patient with widespread diffuse axonal injury. Monte Carlo simulation showed that EAR's mean values are more biased by noise than FA when anisotropy is small, both for single fiber tracts and when fiber tracts cross. However, the improved signal-to-noise ratio of EAR relative to FA suggests that EAR may be a superior measure of anisotropy both in quantifying both deep white matter with relatively uniform fiber tracts and pericortical white matter structure with relatively low anisotropy and fiber crossings.     

Optimizing the accuracy and precision of the single‐pulse Laue technique for synchrotron photo‐crystallography

The accuracy that can be achieved in single‐pulse pump‐probe Laue experiments is discussed. It is shown that with careful tuning of the experimental conditions a reproducibility of the intensity ratios of equivalent intensities obtained in different measurements of 3–4% can be achieved. The single‐pulse experiments maximize the time resolution that can be achieved and, unlike stroboscopic techniques in which the pump‐probe cycle is rapidly repeated, minimize the temperature increase due to the laser exposure of the sample.     

Determination of ion structures in structurally related compounds using precursor ion fingerprinting

Structurally-related alkaloids were analyzed by electrospray ionization/multiple stage mass spectrometry (ESI/MS ⁿ ) at varying collision energies to demonstrate a conceptual algorithm, precursor ion fingerprinting (PIF). PIF is a new approach for interpreting and library-searching ESI mass spectra predicated on the precursor ions of structurally-related compounds and their matching product ion spectra. Multiple-stage mass spectra were compiled and constructed into “spectral trees” that illustrated the compounds’ product ion spectra in their respective mass spectral stages. The precursor ions of these alkaloids were characterized and their spectral trees incorporated into an MS ⁿ library. These data will be used to construct a universal, searchable, and transferable library of MS ⁿ spectra. In addition, PIF will generate a proposed structural arrangement utilizing previously characterized ion structures, which will assist in the identification of unknown compounds.     

Evidence for the formation of anhydrous zinc acetate and acetic anhydride during the thermal degradation of zinc hydroxy acetate,Zn5(OH)8(CH3CO2)2·4H2O to ZnO

Zinc hydroxy acetate, Zn₅(OH)₈(CH₃CO₂)₂·4H₂O, has been prepared by the precipitation method. It has been demonstrated by FTIR analysis that, contrary to previous reports, the interaction of the acetate anion with the matrix cation is ionic. TG analysis, mass spectral analysis of the evolved gases, and in situ variable temperature PXRD and FTIR analysis have shown that decomposition of the material to ZnO involves the formation of Zn₅(OH)₈(CH₃CO₂), Zn₃(OH)₄(CH₃CO₂)₂ and anhydrous zinc acetate (Zn(CH₃CO₂)₂) as some of the acetate-containing intermediate solid products. The acetate anion is finally lost, at temperatures below 400 °C, as acetic anhydride, (CH₃CO)₂O.     

Traveling the Vitamin B12 Pathway: Oral Delivery of Protein and Peptide Drugs

Oral routes of administration for therapeutic peptides and proteins face two major barriers: proteolytic degradation in the stomach and an inadequate absorption mechanism for polypeptides within the intestinal lumen. As a result, peptide‐based therapeutics are administered by injection, a painful process associated with lower patient compliance. The development of a means of overcoming these two major obstacles and enabling the successful delivery of peptide therapeutics by the oral route of administration has therefore been the target of extensive scientific endeavor. This Minireview focuses on oral peptide/protein delivery by the dietary uptake pathway for vitamin B₁₂. Recent progress in this field includes the delivery of erythropoietin, granulocyte‐colony‐stimulating factor, luteinizing‐hormone‐releasing hormone, and insulin.     

Functionalized Templates for the Convergent Assembly of Polyethers: Synthesis of the HIJK Rings of Gymnocin A

Extension ladder : The successful application of epoxide‐opening strategies towards the synthesis of ladder‐type polyethers is contingent upon further elaboration of the product. By employing two different functionalized templates, a fragment of gymnocin A that bears four sites for subsequent fragment coupling has been prepared (see scheme; Bn=benzyl).

     

Investigation of (1R,2S)‐(−)‐Ephedrine by Cryogenic Terahertz Spectroscopy and Solid‐State Density Functional Theory

The terahertz (THz) spectrum of the pharmaceutical (1R,2S)‐(?)‐ephedrine from 8.0 to 100.0 cm^?1 is investigated at liquid‐nitrogen (78.4 K) temperature. The spectrum exhibits several distinct features in this range that are characteristic of the crystal form of the compound. A complete structural analysis and vibrational assignment of the experimental spectrum is performed using solid‐state density functional theory (DFT) and cryogenic single‐crystal X‐ray diffraction. Theoretical modeling of the compound includes an array of density functionals and basis sets with the final assignment of the THz spectrum performed at a PW91/6‐311G(d,p) level of theory, which provides excellent solid‐state simulation agreement with experiment. The solid‐state analysis indicates that the seven experimental spectral features observed at low temperature consist of 13 IR‐active vibrational modes. Of these modes, nine are external crystal vibrations and provide approximately 57 % of the predicted spectral intensity. This study demonstrates that the THz spectra of complex pharmaceuticals may be well reproduced by solid‐state DFT calculations and that inclusion of the crystalline environment is necessary for realistic and accurate simulations.     

Computational Analysis of Mixing and Scale-Up in Emulsion Polymerization Reactors

Summary: A hybrid multi-zonal/computational fluid dynamics (CFD) framework is currently being developed to aid in the scale-up of high solid content latex production and processing. Poly3D, a commercial laminar CFD code tailored to modelling the mixing of non-Newtonian fluids, has been coupled to a population balance model via a customized interface. CFD is used to generate flow fields inside a series of reactors; this information is then transferred to a multi-zone population balance model to assess the impact of non-homogenous mixing on the evolution of the latex particle size distribution (PSD) when concentrated latex suspension is altered via the addition of a coagulant. The rheological properties of high solid content latexes are sensitive to changes in the PSD, so the flow field is periodically updated if significant changes in the rheological properties of the latex are detected in any of the zones. The details of the models comprising the framework are presented and the utility of the framework is demonstrated.     

The effect of tailpipe friction on pressure and velocity oscillations in a nonlinear,lumped parameter,pulse combustor model

A lumped parameter model of pulse combustor behavior is formulated which takes into account the effect of tailpipe friction. The model is analyzed by employing asymptotic expansions of the pressure in the chamber and the velocity of the combustion products in the tailpipe and invoking the Poincarè–Lindstedt methodology. It is shown that the presence of frictional damping in the tailpipe can lead to situations where periodic pressure and velocity oscillations occur with periods so large that they would, in effect, not be physically observable.     

Nanoparticle agglutination: acceleration of aggregation rates and broadening of the analyte concentration range using mixtures of various-sized nanoparticles

SiO(2) particles of various sizes were prepared and surface modified with biotin-chain-end-functionalized poly(ethylene glycol). Dispersions of these particles were prepared, and their aggregation was induced upon the addition of avidin. The aggregate size and growth rate were monitored by DLS analysis, and SEM and TEM images of freeze-dried samples of the aggregate solutions were used to confirm the DLS data and to image the aggregate size and dimension. A linear correspondence between apparent diameter and time was observed, and both the 20 and 300 nm particles aggregated at slower rates than for the 40 nm particles. These observations were attributed to differences in the average functionality of the systems and the different initial concentrations of particles and avidin. The observed aggregation rates of binary combinations of the three particle sizes (i.e., 20 + 40 nm or 40 + 300 nm) were faster than those of the single-sized mixtures. These results were attributed to the faster flux of smaller particles toward larger particles in the mixture solutions as well as to the potentially larger number of productive collisions possible between mixtures of small particles and large particles versus only similarly sized particles. Combinations of the three sizes of particles were studied to find an empirical optimum formulation for generating large aggregates on a short time scale and over a wide range of analyte concentrations.