Interlaboratory study of DNA extraction from multiple ground samples, multiplex real-time PCR, and multiplex qualitative PCR for individual kernel detection system of genetically modified maize

In many countries, the labeling of grains, feed, and foodstuff is mandatory if the genetically modified (GM) organism content exceeds a certain level of approved GM varieties. We previously developed an individual kernel detection system consisting of grinding individual kernels, DNA extraction from the individually ground kernels, GM detection using multiplex real-time PCR, and GM event detection using multiplex qualitative PCR to analyze the precise commingling level and varieties of GM maize in real sample grains. We performed the interlaboratory study of the DNA extraction with multiple ground samples, multiplex real-time PCR detection, and multiplex qualitative PCR detection to evaluate its applicability, practicality, and ruggedness for the individual kernel detection system of GM maize. DNA extraction with multiple ground samples, multiplex real-time PCR, and multiplex qualitative PCR were evaluated by five laboratories in Japan, and all results from these laboratories were consistent with the expected results in terms of the commingling level and event analysis. Thus, the DNA extraction with multiple ground samples, multiplex real-time PCR, and multiplex qualitative PCR for the individual kernel detection system is applicable and practicable in a laboratory to regulate the commingling level of GM maize grain for GM samples, including stacked GM maize.     

Molecular states of p-dimethylaminobenzonitrile coground with β-cyclodextrin investigated using solid-state fluorescence spectroscopy

Changes in molecular states of p-dimethylaminobenzonitrile (DMABN) coground with β-cyclodextrin (β-CD) were examined using solid-state fluorescence measurements. Formation of a DMABN/β-CD inclusion complex by coprecipitation was confirmed by powder X-ray diffraction measurement. The powder X-ray diffraction pattern of the ground mixture was a halo pattern and differed from the pattern of the mixture prepared by coprecipitation. Solid-state fluorescence measurements revealed emission by DMABN crystals in a twisted intermolecular charge-transfer state at 473 nm. DMABN in the DMABN/β-CD coprecipitate had a fluorescence emission peak at 393 nm due to its planar structure. In contrast, DMABN in a DMABN/β-CD ground mixture had an emission peak at 473 nm due to its twisted structure. Grinding time-dependent structural changes in DMABN were evaluated using fluorescence lifetime and relative quantum yield measurements. Structural changes in DMABN in the DMABN/β-CD coprecipitate from a planar to a twisted structure were observed with grinding. DMABN, dispersed in microcrystalline cellulose (CC) molecules in a DMABN/CC ground mixture, had a fluorescence emission peak at 473 nm. However, the excitation spectrum of a DMABN/β-CD ground mixture differed from that of DMABN in CC. These results indicated that the molecular state of DMABN accommodated in the β-CD cavity differs between the coprecipitate and the ground mixture.     

Kinetics of hydrogen bonding between anthracene urea derivatives and anions in the excited state

Urea compounds are useful anion sensors due to their hydrogen-bonding capabilities. We investigated the emissive properties of complexes consisting of urea-anthracene (nPUA, n = 1, 2) host compounds and acetate anions held as guests through intermolecular hydrogen bonding. The kinetics of a new emission band formed by conformational changes in the excited singlet state were revealed. The new band is thought to arise from a charge-transfer interaction between the anthracene and urea moieties after intermolecular hydrogen-bond reconfiguration in the excited state, with rate constants of 2.4 × 10(9) and 4.0 × 10(7) s(-1) for 1PUA and 2PUA, respectively.     

Synthesis of unsymmetrically substituted dodecakis(trifluoroethoxy)-phthalocyaninato vanadyl complexes

Three novel unsymmetrical vanadyl dodecakis(2,2,2-trifluoroethoxy)phthalocyaninates with nitro, amino or with no substitution were synthesized by a statistical condensation of 3,4,5,6-tetrakis(2,2,2-trifluoroethoxy)phthalonitrile with 4-nitro, 4-amino or 4-unsubstituted phthalonitrile, and separated by common column chromatography. These highly soluble phthalocyanines were characterized by elemental analysis, ir and ¹H-nmr, uv-visible and fast-atom-bombardment mass spectroscopy. Their uv-visible absorption spectra in solution and in doped poly(methyl methacrylate) films showed that they were less aggregated unsymmetrical phthalocyanines.     

Synthesis and photoluminescence study of anthracene based dendrimer and dendron

A new type of polyaromatic dendrimer composed of six anthracene groups was synthesized, which showed a monomeric fluorescence feature with a diminished quantum yield due to intramolecular self-quenching processes in the dendritic framework.     

Synthesis and characterization of the novel l‐(substituted phenoxy/phenyl)‐2‐phospholene and phospholane 1‐oxide derivatives

The synthesis of the novel 1‐(substituted phenoxy/phenyl)‐2‐phospholene and phospholane 1‐oxide derivatives, which are analogs of sugars having a phosphorus atom in place of the ring oxygen of normal sugars, is described. All of the synthesized derivatives are structurally characterized by multi nuclear NMR, mass, and IR spectral data, elemental and X‐ray crystallographic analyses.     

Identification of Two Palmitoyl Groups in Octopus Rhodopsin

Abstract— We determined the structure and site of fatty acid incorporated in octopus rhodopsin using a combination of fluorescence label and enzymatic cleavage methods in conjunction with fast-atom bombardment (FAB) mass spectrometry. A single peptide containing two adjacent cysteines, Cys337 and Cys338, was successfully isolated using the fluorescence from a dye conjugated to Cys345. The FAB mass spectrometric analysis of the peptide (323phe-³⁴⁰phe) revealed that two palmitoyl groups are linked to Cys337 and Cys338 via thioester bonds in octopus rhodopsin as in bovine rhodopsin.     

Preparation of flexible and transparent polylactic acids films by crystallization manipulation

Highly flexible and transparent polylactic acids (PLAs) films were successfully prepared by manipulating their crystallization. The semicrystalline poly(L ‐lactic acid) (L) was blended with a noncrystalline poly(DL ‐lactic acid) (DL) together with diglycerol tetraacetate (DGTA). Optimal DGTA content to plasticize PLAs was about 17%. Addition of DL hindered the crystallization of the films. Tensile strengths of the films having DL content more than 5% were about 10 MPa while the elongations at break were boosted as DL content increased. Films having L/DL ratio of 50/50 showed elongations at break of 270%. Stretch ability and clarity of films containing 15–50% DL were fair although they were subjected to annealing at 60 °C for 1 h. © 2008 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 46: 6489–6495, 2008