Computational singular perturbation with non-parametric tabulation of slow manifolds for time integration of stiff chemical kinetics

This paper presents a novel tabulation strategy for the adaptive numerical integration of chemical kinetics using the computational singular perturbation (CSP) method. The strategy stores and reuses CSP quantities required to filter out fast dissipative processes, resulting in a non-stiff chemical source term. In particular, non-parametric regression on low-dimensional slow invariant manifolds (SIMs) in the chemical state space is used to approximate the CSP vectors spanning the fast chemical subspace and the associated fast chemical time-scales. The relevant manifold and its dimension varies depending on the local number of exhausted modes at every location in the chemical state space. Multiple manifolds are therefore tabulated, corresponding to different numbers of exhausted modes (dimensions) and associated radical species. Non-parametric representations are inherently adaptive, and rely on efficient approximate-nearest-neighbor queries. As the CSP information is only a function of the non-radical species in the system and has relatively small gradients in the chemical state space, tabulation occurs in a lower-dimensional state space and at a relatively coarse level, thereby improving scalability to larger chemical mechanisms. The approach is demonstrated on the simulation of homogeneous constant pressure H₂–air and CH₄–air ignition, over a range of initial conditions. For CH₄–air, results are shown that outperform direct implicit integration of the stiff chemical kinetics while maintaining good accuracy.     

Dependence of modulus of elasticity and thermal conductivity on reference temperature in generalized thermoelasticity for an infinite material with a spherical cavity

Introduction Thetheoryofgeneralizedthermoelasticitywithonerelaxationtimebasedonamodified Fourier’slawofheatconductionwasdevelopedbyLordandShulman[1].Thistheoryallowsfor theso_calledsecond_soundeffectsinsolids,hencethermaldisturbancespropagatewithfinite wavespeeds. Themathematicalmodelofthegeneralizedthermoelasticitytheoryisofacomplicatednature thathindersthepossibilityofderivingananalyticalsolution.Mostattemptsdealingwiththese equationsarebasedoneithershort_timesolution[2-4]. Modernstructur…     

Polyethylenimine-impregnated mesoporous silica: effect of amine loading and surface alkyl chains on CO2 adsorption

Poly(ethyleneimine) (PEI) supported on pore-expanded MCM-41 whose surface is covered with a layer of long-alkyl chains was found to be a more efficient CO(2) adsorbent than PEI supported on the corresponding calcined silica and all PEI-impregnated materials reported in the literature. The layer of surface alkyl chains plays an important role in enhancing the dispersion of PEI, thus decreasing the diffusion resistance. It was also found that at low temperature, adsorbents with relatively low PEI contents are more efficient than their highly loaded counterparts because of the increased adsorption rate. Extensive CO(2) adsorption-desorption cycling showed that the use of humidified feed and purge gases affords materials with enhanced stability, despite limited loss due to amine evaporation.     

Enantiomeric Thin-Layer Chromatographic Assay of Escitalopram in Presence of “In-Process Impurities”

JPC – Journal of Planar Chromatography – Modern TLC - A simple, rapid and precise thin-layer chromatographic (TLC) method for analysis of escitalopram oxalate (ESC-OX) (S-enantiomer) in...     

Microwave assisted synthesis and unusual coupling of some novel pyrido[3,2-f][1,4]thiazepines

3-Amino-3-thioxopropanamide (1) reacted with ethyl acetoacetate to form 6-hydroxy-4-methyl-2-thioxo-2,3-dihydropyridine-3-carboxamide (2), which reacted with α-haloketones 3 to produce 2,3-disubstituted-8-hydroxy-6-methyl-2H,5H-pyrido[3,2-f]-[1,4]thiazepin-5-ones 4a-c. Benzoylation of 4c led to the formation of the dibenzoate derivative 9. Compounds 4a-c could be prepared stepwise through the formation of S-alkylated derivatives 10a-c. Compounds 2, 4a-c, 9 and 10a-c were prepared using microwave as a source of heat, and gave better yields in shorter times than those achieved by traditional methods. Coupling of 4a-c with arenediazonium chlorides proceeded unusually to give the 6-hydroxy-4-methyl-2-(arylazo)thieno[2,3-b]pyridin-3(2H)-one ring contraction products 14. Structures of the newly synthesized compounds were proven by spectral and chemical methods.     

Synthesis of New Cobalt(III) Meso-Porphyrin Complex,Photochemical, X-ray Diffraction,and Electrical Properties for Photovoltaic Cells

The present work describes the preparation and characterization of a new cobalt(III) porphyrin coordination compound named (chlorido)(nicotinoylchloride)[meso-tetra(para-chlorophenyl)porphyrinato]cobalt(III) dichloromethane monosolvate with the formula [Co^III(TClPP)Cl(NTC)]·CH₂Cl₂ (4). The single-crystal X-ray molecular structure of 4 shows very important ruffling and waving distortions of the porphyrin macrocycle. The Soret and Q absorption bands of 4 are very red-shifted as a consequence of the very distorted porphyrin core. This coordination compound was also studied by fluorescence and cyclic voltammetry. The efficiency of our four porphyrinic compounds—the H₂TClPP (1) free-base porphyrin, the [Co^II(TClPP)] (2) and [Co^III(TClPP)Cl] (3) starting materials, and the new Co(III) metalloporphyrin [Co^III(TClPP)Cl(NTC)]·CH₂Cl₂ (4)—as catalysts in the photochemical degradation was tested on malachite green (MG) dye. The current voltage of complexes 3 and 4 was also studied. Electrical parameters, including the saturation current density (J_s) and barrier height (ϕ_b), were measured.     

Integrated System Pharmacology Approaches to Elucidate Multi-Target Mechanism of Solanum surattense against Hepatocellular Carcinoma

Hepatocellular carcinoma (HCC) is one of the most common malignant liver tumors with high mortality. Chronic hepatitis B and C viruses, aflatoxins, and alcohol are among the most common causes of hepatocellular carcinoma. The limited reported data and multiple spectra of pathophysiological mechanisms of HCC make it a challenging task and a serious economic burden in health care management. Solanum surattense (S. surattense) is the herbal plant used in many regions of Asia to treat many disorders including various types of cancer. Previous in vitro studies revealed the medicinal importance of S. surattense against hepatocellular carcinoma. However, the exact molecular mechanism of S. surattense against HCC still remains unclear. In vitro and in silico experiments were performed to find the molecular mechanism of S. surattense against HCC. In this study, the network pharmacology approach was used, through which multi-targeted mechanisms of S. surattense were explored against HCC. Active ingredients and potential targets of S. surattense found in HCC were figured out. Furthermore, the molecular docking technique was employed for the validation of the successful activity of bioactive constituents against potential genes of HCC. The present study investigated the active “constituent–target–pathway” networks and determined the tumor necrosis factor (TNF), epidermal growth factor receptor (EGFR), mammalian target of rapamycin (mTOR), Bcl-2-like protein 1(BCL2L1), estrogen receptor (ER), GTPase HRas, hypoxia-inducible factor 1-alpha (HIF1-α), Harvey Rat sarcoma virus, also known as transforming protein p21 (HRAS), and AKT Serine/Threonine Kinase 1 (AKT1), and found that the genes were influenced by active ingredients of S. surattense. In vitro analysis was also performed to check the anti-cancerous activity of S. surattense on human liver cells. The result showed that S. surattense appeared to act on HCC via modulating different molecular functions, many biological processes, and potential targets implicated in 11 different pathways. Furthermore, molecular docking was employed to validate the successful activity of the active compounds against potential targets. The results showed that quercetin was successfully docked to inhibit the potential targets of HCC. This study indicates that active constituents of S. surattense and their therapeutic targets are responsible for their pharmacological activities and possible molecular mechanisms for treating HCC. Lastly, it is concluded that active compounds of S. surattense act on potential genes along with their influencing pathways to give a network analysis in system pharmacology, which has a vital role in the development and utilization of drugs. The current study lays a framework for further experimental research and widens the clinical usage of S. surattense.