SUPER TOUGH GELS WITH A DOUBLE NETWORK STRUCTURE

Living tissues work with fantastic functions in soft and wet gel-like state.Thus,hydrogels have attracted much attention as excellent soft and wet materials,suitable tot making artificial organs for medical treatments.However, conventional hydrogels are mechanically too weak for practical uses.We have created double network (DN) hydrogels with extremely high mechanical strength in order to overcome this problem.DN gels are interpenetrating network (IPN) hydrogels consisting of rigid polyelectrolyte and s...     

Enantioselective Protonation of Cyclic Carbonyl Ylides by Chiral Lewis Acid Assisted Alcohols

Chiral Lewis acid-catalyzed asymmetric alcohol addition reactions to cyclic carbonyl ylides generated from N-(α-diazocarbonyl)-2-oxazolidinones featuring a dual catalytic system are reported. Construction of a chiral quaternary heteroatom-substituted carbon center was accomplished in which the unique heterobicycles were obtained in good yields with high stereoselection. The alcohol adducts were successfully converted to optically active oxazolidine-2,4-diones by hydrolysis. Mechanistic studies by DFT calculations revealed that alcohols could be activated by Lewis acids, enabling enantioselective protonation of the carbonyl ylides.     

Pattern enrichment analysis for phage selection of stapled peptide ligands

Phage display is the most widely used technique to discover de novo peptides that bind to target proteins. However, it is associated with some challenges such as compositional bias. In this study, to overcome these difficulties, we devised a ‘pattern enrichment analysis.’ In this method, two samples (one obtained by affinity selection, the other simply amplified without selection) are prepared, and the two sequence datasets read on next-generation sequencer are compared to find the three-residue pattern most enriched in the selected sample. This allows us to compare two sequence datasets with high coverage and facilitates the identification of peptide sequences and the key residues for binding. We also demonstrated that this approach in the combination with structured peptide libraries allowed spatial mapping of the enriched sequence patterns. Here, we prepared a phage library displaying chemically stapled helical peptides with the X₁C₂X₃X₄X₅X₆X₇X₈C₉X₁₀ sequence, where X is any amino acid. To validate our method, we performed screening against the HDM2 protein. The results showed that the hydrophobic residues (Phe, Tyr, Trp and Leu) that are key to interactions with HDM2 were clearly identified by the pattern enrichment analysis. We also performed selection targeting the SARS-CoV-2 spike RBD in the same manner. The results showed that similar patterns were enriched among the hit peptides that inhibited the protein–protein interaction.

To effectively identify helical peptide binders from a phage library, we developed “pattern enrichment analysis,” which finds the enriched three-residue patterns by comparison with a control sample.     

Fluorescent Cyclodextrin/Peptide Hybrids with a Novel Guest‐Responsive Chemosensor in the Peptide Side Chain

Peptides bearing β‐cyclodextrin and 4‐(N,N‐dimethylamino)benzoyl (DMAB) units in the peptide side chains were prepared as chemosensors for molecule detection. The DMAB unit was expected to be included into the cyclodextrin cavity intramolecularly. However, these peptides exhibited no twisted intramolecular charge transfer fluorescence and the normal fluorescence intensity decreased upon the addition of 1‐adamantanol as an exogenous guest, indicating that the DMAB units are shallowly included in the cyclodextrin cavities.     

Preparation of Main‐Chain‐Type Quinolinol Polymers by Organometallic Polycondensation

Summary: New main‐chain‐type polymers of 8‐quinolinol were prepared by organometallic polycondensation. They had a poly(aryleneethynylene)‐type structure and exhibited photoluminescence with a peak at about 470 nm and quantum yields of 21–39%. Metal ions such as Zn²⁺ and Al³⁺ modified the photoluminescence.

Structure of the three main‐chain‐type polymers of 8‐quinolinol synthesized and studied here.     

Fine Tunable,Redox Active Octapalladium Chains Supported by Linear Tetraphosphines,Leading to Dynamically 1D Self-Assembled Coordination Polymers

A series of the octapalladium chains supported by meso-Ph₂PCH₂P(Ph)CH₂P(Ph)CH₂PPh₂ (meso-dpmppm) ligands, [Pd₈(meso-dpmppm)₄(L)₂](BF₄)₄ (L=none ( 1 ), solvents: CH₃CN ( 2 a ), dmf ( 2 b ), dmso ( 2 c ), RN≡C: R=Xyl ( 3 a ), Mes ( 3 b ), Dip ( 3 c ), ^tBu ( 3 d ), Cy ( 3 e ), CH₃(CH₂)₇ ( 3 f ), CH₃(CH₂)₁₁ ( 3 g ), CH₃(CH₂)₁₇ ( 3 h )) and [Pd₈(meso-dpmppm)₄(X)₂](BF₄)₂ (X=Cl ( 4 a ), N₃ ( 4 b ), CN ( 4 c ), SCN ( 4 d )), were synthesized by using 2 a as a stable good precursor, and characterized by spectroscopic (IR, ¹H and ³¹P NMR, UV-vis-NIR, ESI-MS) measurements and X-ray crystallographic analyses (for 1 , 2 a , b , 3 a , b , e , f , 4 a – d ). On the basis of DFT calculations on the X-ray determined structure of 2 b ( [2b-Pd₈]⁴⁺ ) and the optimized models [Pd₈(meso-Ph₂PCH₂P(H)CH₂P(H)CH₂PH₂)₄(CH₃CN)₂]⁴⁺ ( [Pd₈Ph₈]⁴⁺ ) and [Pd₈(meso-H₂PCH₂P(H)CH₂P(H)CH₂PH₂)₄(CH₃CN)₂]⁴⁺ ( [Pd₈H₈]⁴⁺ ), with and without empirically calculating dispersion force stabilization energy (B3LYP-D3, B3LYP), the formation energy between the two Pd₄ fragments is assumed to involve mainly noncovalent interactions (ca. −70 kcal/mol) with four sets of interligand C−H/π interactions and Pd⋅⋅⋅Pd metallophilic one, while electron shared covalent interactions are almost canceled out within the Pd₈ chain. All the compounds isolated are stable in solution and exhibit characteristic absorption at ∼900 nm, which is assignable to a spin allowed HOMO to LUMO transition, and shows temperature dependent intensity change with variable absorption coefficients presumably due to coupling with some thermal vibrations. The structures and electronic states of the Pd₈ chains are found finely tunable by varying the terminal capping ligands. In particular, theoretical calculations elucidated that the HOMO-LUMO energy gap is systematically related to the central Pd−Pd distance (2.7319(6)–2.7575(6) Å) by two ways with neutral ligands L ( 1 , 2 , 3 ) and with anionic ligands X ( 4 ), which are reflected on the NIR absorption energy of 867–954 nm. The isocyanide terminated Pd₈ complexes ( 3 ) further reacted with excess of RNC (6 eq) to afford the Pd₄ complexes, [Pd₄(meso-dpmppm)₂(RNC)₂](BF₄)₂ ( 13 ), and the cyclic voltammograms of 2 a (L=CH₃CN), 3 , and 13 (R=Xyl, Mes, ^tBu, Cy) demonstrated wide range redox behaviors from 2{Pd₄}⁴⁺ to 2{Pd₄}⁰ through 2{Pd₄}²⁺↔{Pd₈}⁴⁺, {Pd₈}³⁺, and {Pd₈}²⁺ strings. The oxidized complexes, [Pd₄(meso-dpmppm)₂(RNC)₃](BF₄)₄ ( 16 ), were characterized by X-ray analyses, and the two-electron reduced chain of [Pd₈(meso-dpmppm)₄](BF₄)₂ ( 7 ) was analyzed by spectroscopic and electrochemical techniques and DFT calculations. Reactions of 2 a with 1 equiv. of aromatic linear bisisocyanide (BI) in CH₂Cl₂ deposited insoluble coordination polymers, {[Pd₈(meso-dpmppm)₄(BI)](BF₄)₄}_n ( 5 ), and interestingly, they were soluble in acetonitrile, ³¹P{¹H} and ¹H DOSY NMR spectra as well as SAXS curves suggesting that the coordination polymers may exist in acetonitrile as dynamically 1D self-assembled coordination polymers comprising ca. 50 units of the Pd₈ rod averaged within the timescale.     

Influence of Zn Diffusion on Bandwidth and Extinction in MQW Electroabsorption Modulators Buried with Semi-Insulating InP

A comprehensive analysis of multi-quantum-well electroabsorption modulators buried with semi-insulating (SI)-InP is presented. We quantitatively demonstrate that suppression of Zn diffusion into the burying and optical core layers plays a key role in high-speed and high-extinction operation.