Sequence-specific gene silencing in mammalian cells by alkylating pyrrole-imidazole polyamides

Gene silencing was examined by sequence-specific alkylation of DNA by N-methylpyrrole (Py)-N-methylimidazole (Im) hairpin polyamides. Polyamides ImImPyPygammaImImPyLDu86 (A) and ImImPyPygammaImPyPyLDu86 (B) selectively alkylated the coding regions of the renilla and firefly luciferases, respectively, according to the base pair recognition rule of Py-Im polyamides. Two different plasmids, encoding renilla luciferase and firefly luciferase, were used as vectors to examine the effect of alkylation on gene silencing. Transfection of the alkylated luciferase vectors-by polyamide A or B-into HeLa, 293, and NIH3T3 cells demonstrated that these sequence-specific DNA alkylations lead to selective silencing of gene expression. Next, the vectors were cotransfected into HeLa cells and the cells were treated with polyamide A or B. Selective reduction of luciferase activities was caused by both polyamides. On the basis of this sequence-specific alkylation and gene silencing activity, these alkylating Py-Im polyamides thus have potential as antitumor drugs to target specific gene expression in human cells.     

Copper‐Catalyzed Regioselective Hydroalkylation of 1,3‐Dienes with Alkyl Fluorides and Grignard Reagents

Copper complexes generated in situ from CuCl₂, alkyl Grignard reagents, and 1,3‐dienes play important roles as catalytic active species for the 1,2‐hydroalkylation of 1,3‐dienes by alkyl fluorides through C? F bond cleavage. The alkyl group is introduced to an internal carbon atom of the 1,3‐diene regioselectively, thus giving rise to the branched terminal alkene product.     

Stable [48]‐, [50]‐, and [52]Dodecaphyrins(1.1.0.1.1.0.1.1.0.1.1.0): The Largest Hückel Aromatic Molecules

[52]Dodecaphyrin(1.1.0.1.1.0.1.1.0.1.1.0) was quantitatively oxidized with 2,3‐dichloro‐5,6‐dicyano‐1,4‐benzoquinone (DDQ) to the corresponding [50]dodecaphyrin. Further oxidation of [50]dodecaphyrin with MnO₂ quantitatively afforded [48]dodecaphyrin. Of the three, [50]dodecaphyrin showed Hückel aromatic character as the largest aromatic molecule reported to date. Protonation of [50]dodecaphyrin with methanesulfonic acid (MSA) led to the formation of a planar tetraprotonated species that displayed a sharp and intense Soret‐like band at 906 nm with ε=6.5×10⁵ M ^?1 cm^?1 and Q‐band‐like bands at 1346 and 1600 nm.     

Design,Synthesis, and Biological Evaluation of Artificial Macrosphelides in the Search for New Apoptosis‐Inducing Agents

A drug of two halves : New artificial compounds composed of a macrosphelide core skeleton and an epothilone side chain were designed and synthesized. These compounds were more potent inducers of apoptosis than the parent natural‐type macrosphelides.

     

Properties of poly(acrylamide)/TEMPO-oxidized cellulose nanofibril composite films

Self-standing composite films consisting of 2,2,6,6-tetramethylpiperidine-1-oxyl-oxidized cellulose nanofibril (TOCN) and anionic poly(acrylamide) (PAM) in various weight ratios were prepared by casting and drying of homogeneous mixtures of aqueous TOCN dispersion and PAM solution. PAM/TOCN composite films consisting of 25 % PAM and 75 % TOCN had clearly higher Young’s modulus (13.9 GPa) and tensile strength (266 MPa) than 100 % TOCN film (10.8 GPa and 223 MPa, respectively) or 100 % PAM film (4.9 GPa and 78 MPa, respectively), showing that PAM molecules have mechanical reinforcement ability in TOCN matrix. Some attractive interactions are likely formed between TOCN element surfaces and PAM molecules. In contrast, no such mechanical improvements were observed for poly(vinyl alcohol)/TOCN or oxidized starch/TOCN composite films prepared as references. Moreover, the mechanical properties of the PAM/TOCN composite films were further improved by controlling molecular mass and branching degree of the PAM. The high optical transparency and low coefficient of thermal expansion of the 100 % TOCN film were mostly maintained in the TOCN composite film containing 25 % PAM.     

Iridium‐Catalyzed Enantioselective CH Alkylation of Ferrocenes with Alkenes Using Chiral Diene Ligands

The first catalytic and enantioselective C? H alkylation of ferrocene derivatives with various alkenes was achieved. A cationic iridium complex, having a chiral diene ligand, and an isoquinolyl moiety as a directing group are essential for regioselective and enantioselective C? H bond activation.     

Total Synthesis of Pectenotoxin‐2

Pectenotoxin‐2 (PTX2) is a shellfish toxin and has a non‐anomeric spiroacetal, which is not stabilized by an anomeric effect. The selective construction of the non‐anomeric spiroacetal has been a major problem in the synthesis of PTX2. Described herein is the stereoselective total synthesis of PTX2 via the isomerization of anomeric spiroacetal pectenotoxin‐2b (PTX2b). The synthesis of PTX2b was achieved by a simple process including sulfone‐mediated assembly of spirocyclic and bicyclic acetals and subsequent macrocyclization by ring‐closing olefin metathesis. Finally, the selective construction of PTX2 was accomplished by the early termination of a dynamic transition process to equilibrium in the acid‐catalyzed isomerization of anomeric PTX2b. [6,6]‐Spiroacetal pectenotoxin‐2c (PTX2c) was also synthesized from PTX2b. The cytotoxicity assay of the synthetic compounds against HepG2 and Caco2 cancer cells showed a potency of the order: PTX2?PTX2b>PTX2c.     

Experimental evidence for intramolecular blue-shifting C-H...O hydrogen bonding by matrix-isolation infrared spectroscopy

Experimental evidence for intramolecular blue-shifting C-H...O hydrogen bonding is presented. Argon matrix-isolation infrared spectra of 1-methoxy-2-(dimethylamino)ethane exhibit a band at 3016.5 cm-1. Spectral behavior with annealing indicates that this band is assigned to the most stable conformer, trans-gauche-(trans|gauche'), with an intramolecular C-H...O hydrogen bond. Density functional calculations show that this band arises from the stretching vibration of the C-H bond participating in the formation of the C-H...O hydrogen bond. The C-H bond is shortened by 0.004 A, and the C-H stretching band is blue-shifted by at least 35 cm-1 on the formation of the hydrogen bond. The (C)H...O distance is calculated as 2.38 A, which is shorter than the corresponding van der Waals separation by 0.3 A.     

Palladium-Catalysed Amination of Hindered Aryl Halides with 9H-Carbazole

Palladium-catalysed Buchwald–Hartwig amination of ortho-substituted hindered aryl bromides or chlorides with 9H-carbazole has been investigated. In the amination of 1-bromo- or chloronaphthalene with 9H-carbazole, the combined use of Pd₂(dba)₃ as a Pd precursor, Buchwald ligands with two tert-butyl groups and LiOtBu or lithium hexamethyldisilazide as a base led to satisfactory yields. N,N’-Bis[2,6-bis(diphenylmethyl)-4-methoxyphenyl]imidazol-2-ylidene (IPr*^OMe), which is a bulky N-heterocyclic carbene ligand, showed similar activity as Buchwald ligands with two tert-butyl groups. In contrast, only IPr*^OMe provided satisfactory yields in the amination of 2-bromo-1,1′-biphenyl with 9H-carbazole. The amination of 2-bromo- or chlorotoluene and 1-(2-bromo- or chlorophenyl)naphthalene with 9H-carbazole proceeded smoothly when the IPr*^OMe ligand was used.