Faradaic phase transition of dibenzyl viologen on an HOPG electrode surface studied by in situ electrochemical STM and electroreflectance spectroscopy

Phase transitions of an adsorption layer of dibenzyl viologen (dBV) as a typical diaryl viologen on a basal plane of a highly oriented pyrolytic graphite (HOPG) electrode are described using voltammetry, in situ electrochemical scanning tunneling microscopy (EC-STM), and electroreflectance (ER) spectroscopy. A monolayer redox process at less negative potential than the bulk redox process was found to be the first-order faradaic phase transition between a gaslike adsorption layer of dication (dBV(2+)) and a 2D condensed monolayer of radical cation (dBV(?+)). Comparison of the results of cyclic voltammetry and potential step chronoamperometry was made with those of heptyl viologen (HV), which also undergoes a faradaic phase transition of the first order. It suggested that the contribution of intermolecular π-π interaction between benzyl groups of dBV to the phase transition is minor and apparently equivalent to interchain interaction between the heptyl chains of HV. In situ EC-STM images of the 2D condensed monolayer demonstrated stripe patterns of the rows of dBV(?+) molecules forming 3-fold rotationally symmetric domains. The results of the ER measurements also revealed that the orientation of the longitudinal molecular axis of the bipyridinium moiety of dBV(?+) molecules lying flat on the HOPG electrode surface, most likely with a side-on configuration.     

Synthesis of TiO2 nanocoral structures in ever-changing aqueous reaction systems

A far-from-equilibrium strategy is developed to synthesize coral-like nanostructures of TiO(2) on a variety of surfaces. TiO(2) nanocoral structures consist of anatase base film and rutile nanowire layers, and they are continuously formed on substrates immersed in aqueous TiOSO(4)-H(2)O(2). The sequential deposition of TiO(2) starts with hydrolysis and condensation reactions of titanium peroxocomplexes in the aqueous phase, resulting in deposition of amorphous film. The film serves as adhesive interface on which succeeding growth of rutile nanowires to occur. This initial deposition reaction is accompanied by shift in pH of the reaction media, which is favorable condition for the growth of rutile nanocrystals. During the growth of rutile nanocoral layers, the amorphous base films are transformed to anatase phase. These sequential deposition reactions occur at temperatures as low as 80 °C, and the mild synthetic condition allows the use of a wide range of substrates such as ITO (indium tin oxide), glass, and even organic polymer films. The thickness of nanocoral layer is controllable by repeating the growth reaction of rutile nanocorals. TiO(2) nanocorals show photocatalytic activity as demonstrated by site-specific reduction of Ag(I) ions, which proceeds preferentially on the rutile nanowire layer. The rutile nanowire layer also shows photocatalytic decomposition of acetaldehyde, which is promoted upon increase of the thickness of the nanowire layer. The use of temporally transforming reaction media allows the formation of biphasic TiO(2) nanocoral structures, and the concept of nonequilibrium synthetic approach would be widely applicable to developing structurally graded inorganic nanointerfaces.     

Antireflective structure imprinted on the surface of optical glass by SiC mold

An antireflective structure with two-dimensional 300-nm periodicity was fabricated on a phosphate glass surface using an imprinting process with a SiC mold. The optimized structure designed using RCWA calculation was a convex circular cone sharing the ridge line of adjacent cones. The SiC mold was fabricated using electron beam drawing and subsequent reactive ion etching with CHF₃ and O₂ gases. The glass’ surface reflectance was estimated as 0.2% at 530 nm wavelength, which was approximately 1/20 that of the optically polished surface.     

Total Synthesis of the Bicyclic Depsipeptide HDAC Inhibitors Spiruchostatins A and B, 5′′‐epi‐Spiruchostatin B,FK228 (FR901228) and Preliminary Evaluation of Their Biological Activity

The bicyclic depsipeptide histone deacetylase (HDAC) inhibitors spiruchostatins A and B, 5′′‐epi‐spiruchostatin B and FK228 were efficiently synthesized in a convergent and unified manner. The synthetic method involved the following crucial steps: i) a Julia–Kocienski olefination of a 1,3‐propanediol‐derived sulfone and a L ‐ or D ‐malic acid‐derived aldehyde to access the most synthetically challenging unit, (3S or 3R,4E)‐3‐hydroxy‐7‐mercaptohept‐4‐enoic acid, present in a D ‐alanine‐ or D ‐valine‐containing segment; ii) a condensation of a D ‐valine‐D ‐cysteine‐ or D ‐allo‐isoleucine‐D ‐cysteine‐containing segment with a D ‐alanine‐ or D ‐valine‐containing segment to directly assemble the corresponding seco‐acids; and iii) a macrocyclization of a seco‐acid using the Shiina method or the Mitsunobu method to construct the requisite 15‐ or 16‐membered macrolactone. The present synthesis has established the C5′′ stereochemistry of spiruchostatin B. In addition, HDAC inhibitory assay and the cell‐growth inhibition analysis of the synthesized depsipeptides determined the order of their potency and revealed some novel aspects of structure–activity relationships. It was also found that unnatural 5′′‐epi‐spiruchostatin B shows extremely high selectivity (ca. 1600‐fold) for class I HDAC1 (IC₅₀=2.4 nM ) over class II HDAC6 (IC₅₀=3900 nM ) with potent cell‐growth‐inhibitory activity at nanomolar levels of IC₅₀ values.     

Highly Elastic and Deformable Hydrogel Formed from Tetra‐arm Polymers

After decades of efforts by many researchers, we have succeeded in realizing a near‐ideal polymer network. This network, the Tetra network, is made by cross‐end‐coupling of tetra‐arm polymer modules. The mechanical energy dissipation was extremely low (tan δ ≈ 10⁻⁴). The macroscopic stress–strain relationship of the Tetra network was in good agreement with that of microscopic elastic blobs. The maximum breaking strength was extremely high (≥27 MPa). These results indicate that the Tetra network is closer to an ideal polymer network than any other conventional model networks. Because the Tetra network can be treated as uniformly packed elastic blobs, it should help apply the knowledge of single polymer chains seamlessly to the design of polymer materials and help further develop the theory of rubber elasticity.

     

Parallel two-step phase-shifting digital holography using polarization

We propose an optical implementation of a parallel two-step phase-shifting digital holography that utilizes a polarization technique. The implementation uses a phase-shifting array device consisting of a retarder array attached to an image sensor, and does not require the optical system to image the phase-shifting array device onto the image sensor required for the previously reported optical implementation of the parallel two-step phase-shifting digital holography. Then, the proposed implementation is essentially simple to align and compose. A preliminary experiment showed that the parallel two-step phase-shifting digital holography based on the proposed implementation can remove the conjugate image clinging to the image reconstructed by Fresnel transform alone with DC term suppression. Also, when the reconstruction distance was changed, the qualities of the reconstructed images were quantitatively evaluated by using normalized root-mean-square error. It was clarified that the proposed implementation was superior to other parallel phase-shifting digital holographies and Fresnel transform alone. Thus, the validity of the proposed implementation was confirmed.     

SaxsMDView: a three‐dimensional graphics program for displaying force vectors

A new three‐dimensional graphics program, SaxsMDView, is described. The program performs a three‐dimensional graphical representation for protein molecules along with the force vector (or vector potential) applying to each atom. The displayed object can be rotated and translated in arbitrary directions by interactive mouse manipulation. While SaxsMDView was originally intended to visualize the result of SAXS_MD, a previously developed program based on the restrained molecular dynamics with small‐angle X‐ray scattering constraints, it can also be useful for graphical representation of other objects such as coarse‐grained molecular models reconstructed by ab initio modelling or solvent site‐dipole field vectors induced around the protein molecule. Some examples of the application of the program including the graphical analyses of the results with SAXS_MD are also presented.     

X-ray photoelectron spectroscopic studies on initial oxidation of iron and manganese mono-silicides

Initial oxidation of iron and manganese mono-silicides (FeSi and MnSi) surfaces was studied by X-ray photoelectron spectroscopy (XPS). Clean surfaces of these silicides were prepared by fracturing in an ultra high vacuum, and then the fractured surfaces were oxidized by exposing to high-purity oxygen at pressures up to 1.3 Pa. For the clean FeSi surface, positive chemical shifts of the Fe 2p_3/2 and Si 2p peaks from elemental Fe and Si were 0.5 eV and 0.1 eV, respectively. For the clean MnSi surface, a negative chemical shift of the Si 2p peak from elemental Si was 0.1 eV. Iron on the FeSi surface was oxidized at an oxygen pressure of 1.3 Pa, whereas the silicon was oxidized under the pressure of 1.3 × 10⁻⁶ Pa, indicating that oxidation of silicon occurred prior to that of iron. Manganese and silicon on the MnSi were simultaneously oxidized in the range from 1.3 × 10⁻⁶ Pa to 1.3 × 10⁻³ Pa; however, over the pressure of 1.3 Pa, the oxidation of manganese occurs prior to that of silicon. These oxidation behaviors at low oxygen pressures were similar to those of the FeSi and MnSi fractured in air.     

Diffusion of oxide ions in LaFeO3 single crystal

The tracer diffusion coefficient, $\text{D1}{}_{\mathrm{<mtext>O</mtext>}}$, of oxide ions in LaFeO₃ single crystal was determined over the temperature range of 900–1100°C by the gas-solid isotopic exchange technique using ¹⁸O as a tracer. For the determination of $\text{D1}{}_{\mathrm{<mtext>O</mtext>}}$, the depth profile of ¹⁸O was measured by means of a secondary ion mass spectrometer (SIMS). The surface exchange reaction was found to be slow and the surface exchange rate constant, k, was determined together with $\text{D1}{}_{\mathrm{<mtext>O</mtext>}}$. It was found that $\text{D1}{}_{\mathrm{<mtext>O</mtext>}}$ at 950°C is proportional to P^?0.58_O2, where P_O2 is an oxygen pressure. The vacancy mechanism was determined for the diffusion of oxide ions from the P_O2 dependence. The vacancy diffusion coefficient, D_V, for LaFeO₃ was nearly the same as that for LaCoO₃ at the same temperature. The activation energy for migration of oxide ion vacancies was 74 kJ · mole^?1 for both oxides.     

Encapsulation of anilinonaphthalenesulfonates in carboxylate-terminated PAMAM dendrimer at the polarized water|1,2-dichloroethane interface

Molecular encapsulation of water-soluble anionic fluorescent dye molecules, 8-anilino-1-naphthalenesulfonic acid (ANS), and its bimolecular derivative (bis-ANS), in the generation 3.5 polyamidoamine (G3.5 PAMAM) dendrimer was investigated in the bulk aqueous phase and at the polarized water|1,2-dichloroethane interface. ANS(-) was electrostatically incorporated in the dendrimer, and the fluorescence enhancement with a blue shift of the emission maximum was observed at pH values <6, where the interior of the dendrimer was positively charged. The fluorescence enhancement of ANS was maximized around pH 3 and then decreased under more acidic conditions. The potential dependences of the molecular encapsulation and the interfacial mechanism were studied in detail by means of potential modulated fluorescence (PMF) spectroscopy. Under acidic conditions, the dendrimer incorporated ANS(-) at the positively polarized interface as well as in the aqueous phase. ANS(-) was released from the dendrimer at the intrinsic transfer potential and independently transferred across the interface. Bis-ANS exhibited relatively strong interaction with the dendrimer over a wide pH range (1 < pH < 8), and a negative shift of the transfer potential was observed under the corresponding pH condition. The PMF analysis clearly demonstrated that the interfacial mechanism of the dendrimer involves transfer and adsorption processes depending on the pH condition and the Galvani potential difference.