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41.
Precise determination of d-spacings and compositional ratio of cellulose Iα and Iβ in various native cellulose samples was successfully carried out by synchrotron-radiated X-ray diffraction and time-of-flight
(TOF) neutron diffraction from quasi-powder specimens. X-ray diffraction peaks were separated by the deconvolution method
using six types of profile function: Gaussian, Lorentzian, intermediate Lorentzian, modified Lorentzian, pseudo-Voigt, and
Pearson VII. In terms of R-factors, the pseudo-Voigt function gave the best fit with the observation, and was used for determination
of d-spacings. The numerical results for Valonia cellulose were: dIα (1 0 0) = 0.613 nm; dIβ (1 1 0) = 0.603 nm; dIβ (1 1 0) = 0.535 nm; dIα (0 1 0) = 0.529 nm; Iα content = 0.65. The differences determined between dIα (1 0 0) and dIβ (1 1 0) and between dIβ (1 1 0) and dIα (0 1 0) were similar to those previously reported. Comparison between unresolved peaks for the two types of cellulose samples
revealed a small but definite difference between dIα (1 1 0) and dIβ (2 0 0). The TOF neutron diffractometry using deuterated samples confirmed this difference.
This revised version was published online in August 2006 with corrections to the Cover Date. 相似文献
42.
H Koga N Mori H Yamada Y Nishimura K Tokuda K Kato T Imoto 《Chemical & pharmaceutical bulletin》1992,40(4):965-970
Employing soluble denatured protein substrates and their derivatives, the proteolytic activity of rat cathepsin H was investigated. The enzyme showed aminopeptidase activity which sequentially released amino acid from the N-terminal of the substrate. The aminopeptidase activity did not act on N alpha-acetylated peptides and showed moderate ionic-strength dependence when methionyl-methylcoumarylamide was employed as a substrate. These results indicate that the activity essentially requires an N-terminal free amino group of the substrate and recognizes it electrostatically to some extent. On the other hand, the enzyme was also indicated to exhibit endopeptidase activity by employing appropriate N alpha-acetylated peptide substrates. In contrast to the aminopeptidase activity, the endopeptidase activity showed rather strict specificity, preferring hydrophobic residues at P2 and P3 sites. Because of the broad specificity and high efficiency of the aminopeptidase activity, it was difficult to directly observe endopeptidase activity in the digestion of large peptide substrates with a free alpha-amino terminal. Thus, this is the first experimental evidence that indicates endopeptidase activity by assigning internal peptide bonds cleaved by this activity. From this data, we proposed a model of the binding site of this enzyme. 相似文献
43.
Takegawa Y Deguchi K Ito S Yoshioka S Nakagawa H Nishimura S 《Rapid communications in mass spectrometry : RCM》2005,19(7):937-946
To investigate the possibility of structural assignment based on negative-ion MS2 spectral matching, three isomeric pairs of 2-aminopyridine (PA)-derivatized non-fucosylated, fucosylated, and sialylated oligosaccharides (complex type N-glycans) were analyzed using high-performance liquid chromatography/ion trap mass spectrometry (HPLC/ITMS) with a sonic-spray ionization (SSI) source. In the SSI negative-ion mode the deprotonated molecule [M-2H]2- becomes prominent. Negative-ion MS2 spectra derived from such ions contain many fragment types (B and Y, C and Z, A, and D) and therefore are more informative than the positive-ion MS2 spectra derived from [M+H+Na]2+ ions, which usually consist mainly of B and Y fragment ions. In particular the internal ions (D- and E-type ions) provided useful information about the alpha1-6 branching patterns and the bisecting GlcNAc residue. Spectral matching based on the correlation coefficients between negative-ion MS2 spectra was performed in a manner similar to the positive-ion MS2 spectral matching previously reported. It was demonstrated that negative-ion MS2 spectral matching is as useful and applicable to the structural assignment of relatively large non-fucosylated, fucosylated, and sialylated PA-oligosaccharide isomers as its positive-ion counterpart. 相似文献
44.
Nishizawa M Kohno M Nishimura M Kitagawa A Niwano Y 《Chemical & pharmaceutical bulletin》2005,53(7):796-799
Using a new method having been developed for the purpose of quantitative determination for peroxyradicals, the presence of peroxyradicals was proved in cigarette smoke. In brief, peroxyradicals in cigarette smoke were measured by ESR spectrometry coupled to non-reductive scavenging of 1,1-diphenyl-2-picrylhydrazyl (DPPH). As a result, peroxyradicals were found to be major reactive oxygen species (ROS) since the concentration of peroxyradicals recovered from cigarette smoke was much higher than that of any of other ROS (superoxide and hydroxyl radical) and nitric oxide. Furthermore, several antioxidants (ascorbic acid, reduced glutathione, epigallocatechin gallate, shikonin) were examined for scavenging activity against peroxyradicals in the cigarette smoke. Among them shikonin alone exerted the scavenging activity, suggesting that shikonin is promising antioxidant for cigarette filters because of its effectiveness against broad range of ROS including peroxyradicals, heat resistance, nonvolatility and high affinity to the filter. 相似文献
45.
Iris A. Bermejo Claudio D. Navo Jorge Castro-Lpez Ana Guerreiro Ester Jimnez-Moreno Elena M. Snchez Fernndez Fayna García-Martín Hiroshi Hinou Shin-Ichiro Nishimura Jos M. García Fernndez Carmen Ortiz Mellet Alberto Avenoza Jesús H. Busto Gonalo J. L. Bernardes Ramn Hurtado-Guerrero Jesús M. Peregrina Francisco Corzana 《Chemical science》2020,11(15):3996
The Tn antigen (GalNAc-α-1-O-Thr/Ser) is a well-known tumor-associated carbohydrate determinant. The use of glycopeptides that incorporate this structure has become a significant and promising niche of research owing to their potential use as anticancer vaccines. Herein, the conformational preferences of a glycopeptide with an unnatural Tn antigen, characterized by a threonine decorated with an sp2-iminosugar-type α-GalNAc mimic, have been studied both in solution, by combining NMR spectroscopy and molecular dynamics simulations, and in the solid state bound to an anti-mucin-1 (MUC1) antibody, by X-ray crystallography. The Tn surrogate can mimic the main conformer sampled by the natural antigen in solution and exhibits high affinity towards anti-MUC1 antibodies. Encouraged by these data, a cancer vaccine candidate based on this unnatural glycopeptide and conjugated to the carrier protein Keyhole Limpet Hemocyanin (KLH) has been prepared and tested in mice. Significantly, the experiments in vivo have proved that this vaccine elicits higher levels of specific anti-MUC1 IgG antibodies than the analog that bears the natural Tn antigen and that the elicited antibodies recognize human breast cancer cells with high selectivity. Altogether, we compile evidence to confirm that the presentation of the antigen, both in solution and in the bound state, plays a critical role in the efficacy of the designed cancer vaccines. Moreover, the outcomes derived from this vaccine prove that there is room for exploring further adjustments at the carbohydrate level that could contribute to designing more efficient cancer vaccines.An anti-cancer vaccine based on an unnatural antigen with an sp2-iminosugar fragment. 相似文献
46.
Takeshi Taniguchi Takashi Kawakami Youhei Nishimura Mistutaka Okumura Kizashi Yamaguchi 《Chemical physics letters》2006,420(4-6):397-400
The one-dimensional intermolecular ferromagnetic interaction of a charge-transfer (CT) complex, (BDTA)[Ni(mnt)2] (BDTA: 1,3,2-benzodithiazolyl, mnt: maleonitriledithiolate), is studied by the Kohn–Sham hybrid density functional method, in order to understand the mechanism of the magnetism. All possible effective exchange integrals, J, between the spin pairs of the system indicate that a ferromagnetic interaction (J = 172 cm−1) exists along the b-axis. Magnetic susceptibility, simulated with the ab initio determined J values by the quantum Monte Carlo (QMC) method, is qualitatively consistent with that measured experimentally. 相似文献
47.
Masaharu Tsuji Chikashi Yamagiwa Minoru Endoh Yukio Nishimura 《Chemical physics letters》1980,73(3):407-412
The extensive bands observed from the helium afterglow reaction of SO2 in the 250–540 nm region are assigned to the new SO+(A2Π-X2Πr) system produced from the He+/SO2 dissociative charge-transfer reaction at thermal energy. They had been erroneously interpreted as the SO+2 (C?-X?) system produced from He(23S)/SO2 Penning ionization. The spectroscopic constants for the SO+A2Π) and SO+(X2Πr) states were determined. 相似文献
48.
Hajime Wakui Yoshikazu Tanaka Toyoyuki Ose Isamu Matsumoto Koji Kato Yao Min Taro Tachibana Masaharu Sato Kentaro Naruchi Fayna Garcia Martin Hiroshi Hinou Shin-Ichiro Nishimura 《Chemical science》2020,11(19):4999
Aberrantly truncated immature O-glycosylation in proteins occurs in essentially all types of epithelial cancer cells, which was demonstrated to be a common feature of most adenocarcinomas and strongly associated with cancer proliferation and metastasis. Although extensive efforts have been made toward the development of anticancer antibodies targeting MUC1, one of the most studied mucins having cancer-relevant immature O-glycans, no anti-MUC1 antibody recognises carbohydrates and the proximal MUC1 peptide region, concurrently. Here we present a general strategy that allows for the creation of antibodies interacting specifically with glycopeptidic neoepitopes by using homogeneous synthetic MUC1 glycopeptides designed for the streamlined process of immunization, antibody screening, three-dimensional structure analysis, epitope mapping and biochemical analysis. The X-ray crystal structure of the anti-MUC1 monoclonal antibody SN-101 complexed with the antigenic glycopeptide provides for the first time evidence that SN-101 recognises specifically the essential epitope by forming multiple hydrogen bonds both with the proximal peptide and GalNAc linked to the threonine residue, concurrently. Remarkably, the structure of the MUC1 glycopeptide in complex with SN-101 is identical to its solution NMR structure, an extended conformation induced by site-specific glycosylation. We demonstrate that this method accelerates dramatically the development of a new class of designated antibodies targeting a variety of “dynamic neoepitopes” elaborated by disease-specific O-glycosylation in the immunodominant mucin domains and mucin-like sequences found in intrinsically disordered regions of many proteins.We developed new class of designated antibodies targeting of “dynamic neoepitopes” elaborated by disease-specific O-glycosylation at the immunodominant mucin domains. 相似文献
49.
Letk be a positive integer, and letG be a graph of ordern withn 4k – 5,kn even and minimum degree at leastk. We prove that if the degree sum of each pair of nonadjacent vertices is at leastn, thenG has ak-factor. 相似文献
50.
Hayakawa K Ando K Yoshida N Yamamoto A Matsunaga A Nishimura M Kitaoka M Matsui K 《Biomedical chromatography : BMC》2000,14(2):72-76
A high-performance liquid chromatographic method has been developed for the determination of saccharides in sake, an alcoholic beverage brewed from rice. Saccharides in sake were separated on a normal phase (carbamoyl bonded silica) column using a linear gradient elution of water in acetonitrile. Seven saccharides, glucose, maltose, isomaltose, maltotriose, panose, isomaltotriose and ethyl alpha-D-glucoside, were determined by a polarized photometric detector. Unidentified peaks suggesting saccharides with polymerization degrees over 4 were also observed. The proposed method did not require any sample clean-up treatment. As an application, saccharide compositions in various kinds of sake were compared. 相似文献