Fluorescence probing of albumin-surfactant interaction

Protein-surfactant interactions were studied using bovine serum albumin (BSA) and the three surfactants sodium dodecyl sulfate (SDS), cetyltrimethylammonium bromide (CTAB), and poly(oxyethylene)isooctyl phenyl ether (TX-100). The surfactants used belong to three broad classes, i.e., anionic, cationic, and nonionic. These categories of surfactants were used to elucidate the mechanism of surfactant binding to BSA, at pH 7. The interactions were followed fluorimetrically using both intrinsic tryptophan (Trp) fluorescence and the fluorescence of an external label. The aggregation behavior of the surfactants were studied in the presence of BSA. Steady-state fluorescence studies indicate that all three surfactants bind to BSA in a cooperative manner. This cooperative binding affects the binding of the external label to BSA. All these effects are also manifested in time-resolved fluorescence studies. The effects of surfactants on acrylamide quenching and energy transfer from Trp in BSA to bound dye provided valuable insights into the structural modification of BSA in presence of surfactants. The surfactant-induced conformational change of BSA was also confirmed by circular dichroism studies. However, among the three categories of surfactants, the nonionic surfactant shows the least interaction with BSA.     

(Metallo)porphyrins as Potent Phototoxic Anti‐Cancer Agents after Irradiation with Red Light

Novel photoactive (metallo)porphyrins were synthesised and characterised. When irradiated with light at a wavelength greater than 600 nm, these porphyrins act as photosensitisers and show high cytotoxicity towards two different human cancer cell lines with IC₅₀ values down to 0.4 μM . A paramagnetic copper(II) porphyrin is the first photosensitiser to display excellent phototoxicity, explained by the electron paramagnetic resonance (EPR) spin trapping of hydroxy radicals and experimentally confirmed by the discovery of elevated levels of reactive oxygen species (ROS) inside A2780 cells after irradiation with red light. This finding indicates that paramagnetic compounds should be considered for photodynamic therapy (PDT). Furthermore, an additive effect of cisplatin and a zinc porphyrin, both at subtherapeutic concentrations of 0.22 μm, was observed.     

Novel True Random Number Generator Based Hardware Cryptographic Architecture Using Quantum-Dot Cellular Automata

International Journal of Theoretical Physics - Information processing and conventional computing are usually resource constrained; evermore they need to operate in a physically suspicious...     

An unsupervised context-sensitive change detection technique based on modified self-organizing feature map neural network

In this paper, we propose an unsupervised context-sensitive technique for change-detection in multitemporal remote sensing images. Here a modified self-organizing feature map neural network is used. Each spatial position of the input image corresponds to a neuron in the output layer and the number of neurons in the input layer is equal to the number of features of the input patterns. The network is updated depending on some threshold value and when the network converges, status of output neurons depict a change-detection map. To select a suitable threshold of the network, a correlation based and an energy based criteria are suggested. The proposed change-detection technique is unsupervised and distribution free. Experimental results, carried out on two multispectral and multitemporal remote sensing images, confirm the effectiveness of the proposed approach.     

Tunable size and spectral properties of fluorescent nanoGUMBOS in modified sodium deoxycholate hydrogels

Microstructures of sodium deoxycholate hydrogels were altered considerably in the presence of variable tris(hydroxymethyl)aminomethane (TRIS) concentrations. These observations were confirmed by use of X-ray diffraction, polarized optical microscopy, rheology, and differential scanning calorimetry measurements. Our studies reveal enhanced gel crystallinity and rigidity with increasing TRIS concentrations. The tunable hydrogel microstructures obtained under various conditions have been successfully utilized as templates to synthesize cyanine-based fluorescent nanoGUMBOS (nanoparticles from a group of uniform materials based on organic salts). A systematic variation in size (70-200 nm), with relatively low polydispersity and tunable spectral properties of [HMT][AOT] nanoGUMBOS, was achieved by use of these modified hydrogels. The gel microstructures are observed to direct the size as well as molecular self-assembly of the nanomaterials, thereby tuning their spectral properties. These modified hydrogels were also found to possess other interesting properties such as variable morphologies ranging from fibrous to spherulitic, variable degrees of crystallinity, rigidity, optical activity, and release profiles which can be exploited for a multitude of applications. Hence, this study demonstrates a novel method for modification of sodium deoxycholate hydrogels, their applications as templates for nanomaterials synthesis, as well as their potential applications in biotechnology and drug delivery.     

A multi-loss super regression learner (MSRL) with application to survival prediction using proteomics

Even though a number of regression techniques have been proposed over the years to handle a large number of regressors, due to the complex nature of data emerging from recent high-throughput experiments, it is unlikely that any single technique will be successful in modeling all data types. Thus, multiple regression algorithms from the collection of modern regression techniques that are capable of handling high dimensional regressors should be entertained for analyzing such data. A novel approach of building a super regression learner is proposed which can be fit with a training data set in order to make future predictions of a continuous outcome. The resulting super regression model is multi-objective in nature and mimics the performances of the best component regression models irrespective of the data type. This is accomplished by combining elements of bootstrap based risk calculation, rank aggregation, and stacking. The utility of this approach is demonstrated through its use on mass spectrometry data.     

Constituents of Pongamia pinnata isolated in a screening for activity to overcome tumor necrosis factor-related apoptosis-inducing ligand-resistance

In a search for natural products with activity to overcome tumor necrosis factor-related apoptosis-inducing ligand (TRAIL)-resistance, we performed the bioassay-guided fractionation of a semi mangrove, Pongamia pinnata, collected from Bangladesh, and isolated a new compound, (2S)-(2″,3″:7,8)-furanoflavanone (1), along with six known flavonoids (2-7). Two of the compounds significantly overcame TRAIL-resistance in human gastric adenocarcinoma (AGS) cell lines.     

Flow injection amperometric sensing of uric acid and ascorbic acid using the self-assembly of heterocyclic thiol on Au electrode

Au electrode modified with the self-assembled monolayer of a heterocyclic thiol, mercaptotriazole (MTz), is used for the electroanalysis of uric acid (UA) and ascorbic acid (AA). MTz forms a less compact self-assembly on Au electrode. The self-assembly of MTz on Au electrode favors the oxidation of UA and AA at less positive potential. Significant decrease (∼400 mV) in the overpotential and enhancement in the peak current for the oxidation of interfering AA with respect to the unmodified electrode is observed. The negative shift in the oxidation peak potential of AA favors electrochemical sensing of UA without any interference. Two well-separated voltammetric peaks for AA and UA are observed in their coexistence. The large separation between the two voltammetric peaks allows the simultaneous or selective sensing of the analytes without compromising the sensitivity. Linear response is obtained for a wide concentration range. This electrode could sense as low as 1 μM of UA in the presence of 10-fold excess of interfering AA. No change in the sensitivity (0.012 μA/μM) of the electrode toward UA in the presence and absence of AA is observed. Reproducible and stable amperometric flow injection response was obtained upon repetitive injection.