Towards characterization of the human urinary peptidome

Biomarker discovery in human urine has become an evolving and potentially valuable topic in relation to renal function and diseases of the urinary tract. In order to deliver on the promises and to facilitate the development of validated biomarkers or biomarker panels, protein and peptide profiling techniques need high sample throughput, speed of analysis, and reproducibility of results. Here, we outline the performance characteristics of the liquid chromatography/MALDI-TOF-MS based differential peptide display (DPD(1)) approach for separating, detecting, abundance profiling and identification of native peptides derived from human urine. The typical complexity of peptides in human urine (resolution of the technique with respect to detectable number of peptides), the reproducibility (coefficient of variation for abundance profiles of all peptides detected in biological samples) and dynamic range of the technique as well as the lower limit of detection were characterized. A substantial number of peptides present in normal human urine were identified and compared to findings in four published proteome studies. In an explorative approach, pathological urines from patients suffering from post-renal-filtration diseases were qualitatively compared to normal urine. In conclusion, the peptidomics technology as shown here has a great potential for high throughput and high resolution urine peptide profiling analyses. It is a promising tool to study not only renal physiology and pathophysiology and to determine new biomarkers of renal diseases; it also has the potential to study remotely localized or systemic aberrations within human biology.     

Formation of a freely suspended membrane via a combination of interfacial reaction and wetting

Applying poly(ethoxysiloxane) (a liquid non-water-soluble polymer that can be hydrolyzed and cross-linked by diluted acids) to an air/pH 1 water interface gave rise to thin homogeneous solid layers. These layers were strong enough to be transferable to electron microscopy grids with holes of dimensions up to 150 microm and covered the holes as freely suspended membranes. No homogeneous layers were formed at an air/pH 5 water interface. Brewster angle microscopy images show that the poly(ethoxysiloxane) is not spontaneously forming a wetting layer on water. It initially forms lenses, which slowly spread out within several hours. We conclude that the spreading occurs simultaneously with the hydrolysis and cross-linking of the poly(ethoxysiloxane) and that the reaction products finally assist the complete wetting of the water surface.     

Direct observation of electronic relaxation dynamics in adenine via time-resolved photoelectron spectroscopy

We present femtosecond time-resolved photoelectron spectra of adenine in a molecular beam, recorded at pump wavelengths of 250, 267, and 277 nm. This leads to initial excitation of the bright S2(pipi*). Close to the band origin (277 nm), the lifetime is several picoseconds. Higher vibronic levels (267 and 250 nm excitation) show much shorter lifetimes of t < 50 fs, and we observe strong coupling between S2(pipi*) and S1(npi*). Rapid internal conversion (t < 50 fs) populates the lower lying S1(npi*) state which has a lifetime of 750 fs. At 267 nm, we found evidence for an additional channel which is consistent with the dissociative S3(pisigma*) state, previously proposed as an ultrafast relaxation pathway from S2(pipi*).     

Electrophoretic techniques in element species analysis. Comparison between flow-through and flat-bed techniques

A comparison of electrophoretic techniques for the separation of metal-protein complexes from food extracts is described. A preparative flow-through electrophoresis system with continuous elution of the fractionated substances and an analytical flat-bed gel electrophoresis technique with off-line electro-elution are optimized with regard to this separation problem. The metal-protein complexes are extracted from four flour samples using Tris-glycine buffer (pH 8.3). For the separation, polyacrylamide gels of 14% T and 3% C are prepared and Tris-HCl (pH 8.9) is used as an electrophoresis buffer. For a soy bean flour, not only the separation of protein fractions is achieved but also the metal distribution patterns that are determined by flame atomic absorption spectrometry are given. The results show that the use of the flow-through technique is limited to special fields of application, whereas the flat-bed electrophoresis with subsequent electro-elution of metal-protein complexes is a useful technique in element species analysis.     

ICP-MS – A powerful analytical technique for the analysis of traces of Sb, Bi, Pb, Sn and P in steel

The determination of Sb, Bi, Sn, Pb and P in steel using quadrupole- and double-focusing-sector-field-ICP-MS is described. Simple and fast methods for sample preparation were developed with regard to requirements of ICP-MS. Several certified steel reference materials were analyzed in order to verify the accuracy and precision of the applied methods. Received: 22 April 1997 / Revised: 19 June 1997 / Accepted: 23 June 1997     

Novel Routes to 1,2-Diphosphete and 1,2,4-Triphospholyl π-Complexes

New specific routes to 1,2-diphosphete-, 1,2,4-triphosphol-, and 1,2,4-triphospholyl-π-complexes are reported, which are based on dichloro-1,2-diphosphetene and 1-stannyl-1,2,4-triphosphol as the heterocyclic educts. Details are given for Sn, Mn, Fe, and Co complexes. ESR-data of paramagnetic 1,2,4-triphospholyl sandwich complexes of Co and Mn proof the absence of degenerate SOMOs in these cases.