Synthesis,Crystal Structure,and DNA Binding Studies of the 3-(2-(2-Hydroxybenzylidene)Hydrazinyl)Quinoxalin-2(1H)-One

Crystallography Reports - The Schiff base, 3-(2-(2-hydroxybenzylidene)hydrazinyl)quinoxalin-2(1H)-one has been synthesized by condensation of 3-hydrazinyl quinoxalin-2(1H)-one and salicylaldehyde...     

Matching polynomial coefficients and the Hosoya indices of poly(p-phenylene) graphs

A general approach to determine the matching polynomial (MP) of a graph with two parts connected by an edge is presented in matrix product that is ultimately used in deducing recursion formulas for obtaining the MP coefficients of linear and cylindrical poly(p-phenylene) (PPP) graphs. The Hosoya indices of linear and cylindrical PPPs are derived in terms of that of the two immediately preceding graphs as well as in analytical forms with the use of transfer matrices. Ambient condition density and bulk modulus of linear PPPs with 2–6 phenyl rings have been found to correlate well with the logarithm of their Hosoya indices. Excellent correlations of diameters with the logarithm of Hosoya indices and strain energies with the inverse of the logarithm of Hosoya indices for cylindrical PPPr with r (= 6–16, 18, 20) phenyl rings are obtained. The linear relation between the logarithm of Hosoya indices and diameter and the inverse relation between diameter and strain energy corroborate the fact.     

Molecular Switching Behavior in Isosteric DNA Base Pairs

The structures and proton‐coupled behavior of adenine–thymine (A‐T) and a modified base pair containing a thymine isostere, adenine–difluorotoluene (A‐F), are studied in different solvents by dispersion‐corrected density functional theory. The stability of the canonical Watson–Crick base pair and the mismatched pair in various solvents with low and high dielectric constants is analyzed. It is demonstrated that A‐F base pairing is favored in solvents with low dielectric constant. The stabilization and conformational changes induced by protonation are also analyzed for the natural as well as the mismatched base pair. DNA sequences capable of changing their sequence conformation on protonation are used in the construction of pH‐based molecular switches. An acidic medium has a profound influence in stabilizing the isostere base pair. Such a large gain in stability on protonation leads to an interesting pH‐controlled molecular switch, which can be incorporated in a natural DNA tract.     

Elucidating the structure of surface acid sites on γ-Al2O3

Differential pair distribution function analysis was applied to resolve, with crystallographic detail, the structure of catalytic sites on the surface of nanoscale γ-Al(2)O(3). The structure was determined for a basic probe molecule, monomethylamine (MMA), bound at the minority Lewis acid sites. These active sites were found to be five-coordinate, forming distorted octahedra upon MMA binding. This approach could be applied to study the interaction of molecules at surfaces in dye-sensitized solar cells, nanoparticles, sensors, materials for waste remediation, and catalysts.     

Triazine‐based Organic Polymer‐catalysed Conversion of Epoxide to Cyclic Carbonate under Ambient CO2 Pressure

In this work we have achieved epoxide to cyclic carbonate conversion using a metal‐free polymeric catalyst under ambient CO₂ pressure (1.02 atm) using a balloon setup. The triazine containing polymer (CYA‐ANIS) was prepared from cyanuric chloride (CYA?Cl) and o‐dianisidine (ANIS) in anhydrous DMF as solvent by refluxing under the N₂ gas environment. The presence of triazine and amine functional groups in the polymer results in the adsorption of CO₂ up to 7 cc/g at 273 K. This inspired us to utilize the polymer for the conversion of a series of functionalised epoxides into their corresponding cyclic carbonates in the presence of tetrabutyl ammonium iodide (TBAI) as co‐catalyst. The product has wide range of applications like solvent in lithium ion battery, precursor for polycarbonate, etc. The catalyst was efficient for the conversion of different mono and di‐epoxides into their corresponding cyclic carbonates under atmospheric pressure in the presence of TBAI as co‐catalyst. The study indicates that epoxide attached with electron withdrawing groups (like, CH₂Cl, glycidyl ether, etc.) displayed better conversion compared to simple alkane chain attached epoxides. This is mainly due to the stabilization of electron rich intermediates produced during the reaction (e. g. epoxide ring opening or CO₂ incorporation into the halo‐alkoxide anion). This catalyst mixture was capable to maintain its reactivity up to five cycles without losing its activity. Post catalytic characterization clearly supports the heterogeneous and recyclable nature of the catalyst.     

Mechanochemical Synthesis of Functionalized Quinolines by Iodine Mediated Oxidative Annulation

An iodine‐mediated environmentally benign synthesis of multi‐substituted quinoline derivatives is developed using a solvent‐free mechanochemical process. Appropriately designed and easily accessible protecting group‐free aniline derivatives were used for the oxidative annulation reaction, and a series of quinoline derivatives with variable functionalities were synthesized up to 89 % isolated yield. Importantly, the activator iodine remains in the quinoline molecule and promotes further functionalizations. The present methodology is beneficial with regard to operational simplicity and mild reaction conditions.     

A Novel Serum Glycobiomarker for Diagnosis and Prognosis of Cholangiocarcinoma Detected by Butea monosperma Agglutinin

Plant lectins are widely used in medical glycosciences and glycotechnology. Many lectin-based techniques have been applied for the detection of disease-associated glycans and glycoconjugates. In this study, Butea monosperma agglutinin (BMA), a lectin purified from seeds of the medicinal plant Butea monosperma, was used for the detection of cholangiocarcinoma (CCA)-associated glycans. Expression of BMA-binding N-acetyl galactosamine/galactose (GalNAc/Gal)-associated glycan (BMAG) in CCA tissues was determined using BMA lectin histochemistry; the results showed that BMAG was undetectable in normal bile ducts and drastically increased in preneoplastic bile ducts and CCA. The study in hamsters showed that an increase of BMAG was associated with carcinogenesis of CCA. Using an in-house double BMA sandwich enzyme-linked lectin assay, BMAG was highly detected in the sera of CCA patients. The level of serum BMAG in CCA patients (N = 83) was significantly higher than non-CCA controls (N = 287) and it was applicable for diagnosis of CCA with 55.4% sensitivity, 81.9% specificity, and 76.0% accuracy. A high level of serum BMAG (≥82.5 AU/mL) was associated with unfavorable survival of CCA patients; this information suggested the potential of serum BMAG as a poor prognostic indicator of CCA. In summary, BMAG was aberrantly expressed in preneoplastic bile ducts and CCA, it was also highly detected in patient serum which potentially used as a marker for diagnosis and prognostic prediction of CCA.