A Note on the Construction of Orthogonal Latin Hypercube Designs

Latin hypercube designs have been found very useful for designing computer experiments. In recent years, several methods of constructing orthogonal Latin hypercube designs have been proposed in the literature. In this article, we report some more results on the construction of orthogonal Latin hypercubes which result in several new designs.     

Fluorescence, circular dichroism, light scattering, and microscopic characterization of vesicles of sodium salts of three N-acyl peptides

Aggregation behavior of three N-acyl peptide surfactants, sodium N-(4-n-dodecyloxybenzoyl)-L-alyl-L-valinate (SDBAV), L-valyl-L-alaninate (SDBVA), and L-valyl-L-valinate (SDBVV), were investigated. The amphiphiles have very low critical aggregation concentration (cac). Fluorescence anisotropy studies using 1,6-diphenyl-1,3,5-hexatriene (DPH) as a fluorescent probe indicated formation of bilayer aggregates in dilute solution. Transmission electron micrographs showed the existence of large vesicles in dilute solution. Circular dichroism spectra suggested formation of helical aggregates. The vesicle formation was found to be more favored at neutral pH. Dynamic light scattering was used to measure hydrodynamic radius of the vesicles. The microviscosity of the vesicles formed by the amphiphiles was determined by use of fluorescence anisotropy and the lifetime of the DPH probe. The vesicles formed by the surfactants are stable at temperatures above body temperature and for a long period of time. Fluorescence probe studies, however, indicated transformation of vesicles to rod-like micelles at surfactant concentrations much higher than the cac value. Addition of sodium chloride also transformed the vesicles to rod-like micelles.     

Two-dimensional supramolecular assembly of phenylmercury(II) and cadmium(II) complexes with a tridentate thiohydrazone NNS donor ligand: Synthesis,coordination behavior and crystal structure

The reaction of phenylmercury(II) acetate and cadmium(II) acetate with a refluxed solution of diacetylmonoxime and morpholine N-thiohydrazide formed a novel phenylmercury(II) complex, [PhHg(Hdammthiol)] (1) and a cadmium(II) complex, [Cd(Hdammthiol)₂] (2), respectively (where H₂dammthiol is the thiol form of diacetylmonoximemorpholine N-thiohydrazone (Hdammth) formed by the condensation of diacetylmonoxime and morpholine N-thiohydrazide in the presence of phenylmercury(II) and cadmium(II) ions). The complexes were characterised by elemental analyses and spectral data (electronic, infrared and ¹H NMR) and also by X-ray crystal structure analysis. The X-ray crystallography shows that the phenylmercury(II) complex attained a tricoordinated distorted T-shaped structure, while the cadmium(II) complex attained a trapezoidal bipyramidal geometry. The phenylmercury(II) complex forms a two-dimensional sheet via C–H?O and O–H?N hydrogen bonding and also forms a two-dimensional supramolecular dimer, having C–H?π synthons. Intermolecular C–H?O and O–H?O hydrogen bonding of the cadmium(II) complex forms a two-dimensional supramolecular sheet along the bc plane and posses an impressively short intermolecular C(sp³)?O(sp³) contact.     

Sulfur K-edge XAS and DFT studies on NiII complexes with oxidized thiolate ligands: implications for the roles of oxidized thiolates in the active sites of Fe and Co nitrile hydratase

S K-edge X-ray absorption spectroscopy data on a series of NiII complexes with thiolate (RS-) and oxidized thiolate (RSO2-) ligands are used to quantify Ni-S bond covalency and its change upon ligand oxidation. Analyses of these results using geometry-optimized density functional theory (DFT) calculations suggest that the Ni-S sigma bonds do not weaken on ligand oxidation. Molecular orbital analysis indicates that these oxidized thiolate ligands use filled high-lying S-O pi* orbitals for strong sigma donation. However, the RSO2- ligands are poor pi donors, as the orbital required for pi interaction is used in the S-O sigma-bond formation. The oxidation of the thiolate reduces the repulsion between electrons in the filled Ni t2 orbital and the thiolate out-of-plane pi-donor orbital leading to shorter Ni-S bond length relative to that of the thiolate donor. The insights obtained from these results are relevant to the active sites of Fe- and Co-type nitrile hydratases (Nhase) that also have oxidized thiolate ligands. DFT calculations on models of the active site indicate that whereas the oxidation of these thiolates has a major effect in the axial ligand-binding affinity of the Fe-type Nhase (where there is both sigma and pi donation from the S ligands), it has only a limited effect on the sixth-ligand-binding affinity of the Co-type Nhases (where there is only sigma donation). These oxidized residues may also play a role in substrate binding and proton shuttling at the active site.     

Study of electron transfer in ferrocene-labeled collagen-like peptides

This study describes the electron transfer (ET) phenomenon through a series of (Pro-Hyp-Gly) repeat units containing collagen mimics. The peptides contain redox-active ferrocene (Fc) and thiol-functionalized cystein (Cys) at the N- and C-terminals, respectively. Peptide films were prepared on gold surfaces and characterized by X-ray photoelectron spectroscopy (XPS), ellipsometry, and Fourier transform-reflection absorption infrared spectroscopy (FT-RAIRS). Electrochemical investigations of the films showed a linear but weakly distance-dependent ET. The importance of H-bonding was realized, and the possibility of a conformationally gated ET mechanism has been discussed.     

Effect of the headgroup structure on the aggregation behavior and stability of self-assemblies of sodium N-[4-(n-dodecyloxy)benzoyl]-l-aminoacidates in water

Three amino acid-derived chiral surfactants, sodium N-[4-(n-dodecyloxy)benzoyl]-L-leucinate (SDBL), sodium N-[4-(n-dodecyloxy)benzoyl]-L-isoleucinate (SDBIL), and sodium N-[4-(n-dodecyloxy)benzoyl]-L-threoninate (SDBT), were synthesized, and their aggregation behavior was studied in aqueous solution. Surface tension, fluorescence probe, dynamic light scattering, nuclear magnetic resonance (NMR), gel permeation chromatography, circular dichroism, and optical as well as transmission electron microscopic techniques were utilized to characterize the self-assemblies formed by the amphiphiles. Results of these studies reveal that the surfactants have a very low critical aggregation concentration (cac) and they form spherical vesicles spontaneously in dilute aqueous solution. The mean diameters of the vesicles were measured to be in the range of 130-190 nm. 1H NMR spectra indicated hydrogen bonding between the amide groups near the surfactant headgroup, which is one of the driving forces for vesicle formation. The vesicle formation is more favored at a pH of about 7.0. The amphiphiles also form chiral helical aggregates at relatively higher concentrations as indicated by circular dichroism spectra. The stability of the vesicles was also evaluated with respect to the surfactant concentration, pH, temperature, and aging. The vesicles have a tendency to transform into elongated vesicles (closed tubules) or rodlike micelles with an increase of the surfactant concentration and/or pH. On the basis of the results obtained from different studies, phase diagrams for all three water/amphiphile systems have been constructed. The studies have further shown that the stereogenic center at the amino acid side chain has a significant effect on the aggregation properties of the amphiphiles and on the stability of the self-assemblies.     

Non-linearity parameter B/A of binary liquid mixtures at elevated pressures

When sound waves of high amplitude propagate, several non-linear effects occur. Ultrasonic studies in liquid mixtures provide valuable information about structure and interaction in such systems. The present investigation comprises of theoretical evaluation of the acoustic non-linearity parameter B/A of four binary liquid mixtures using Tong and Dong equation at high pressures and T=303.15 K. Thermodynamic method has also been used to calculate the non-linearity parameter after making certain approximations.     

Attaining record-high magnetic exchange,magnetic anisotropy and blocking barriers in dilanthanofullerenes

While the blocking barrier (U_eff) and blocking temperature (T_B) for “Dysprocenium” SIMs have been increased beyond liquid N₂ temperature, device fabrication of these molecules remains a challenge as low-coordinate Ln³⁺ complexes are very unstable. Encapsulating the lanthanide ion inside a cage such as a fullerene (called endohedral metallofullerene or EMF) opens up a new avenue leading to several Ln@EMF SMMs. The ab initio CASSCF calculations play a pivotal role in identifying target metal ions and suitable cages in this area. Encouraged by our earlier prediction on Ln₂@C₇₉N, which was verified by experiments, here we have undertaken a search to enhance the exchange coupling in this class of molecules beyond the highest reported value. Using DFT and ab initio calculations, we have studied a series of Gd₂@C_2n (30 ≤ 2n ≤ 80), where an antiferromagnetic J_Gd⋯Gd of −43 cm⁻¹ was found for a stable Gd₂@C₃₈-D_3h cage. This extremely large and exceptionally rare 4f⋯4f interaction results from a direct overlap of 4f orbitals due to the confinement effect. In larger cages such as Gd₂@C₆₀ and Gd₂@C₈₀, the formation of two centre-one-electron (2c-1e⁻) Gd–Gd bonds is perceived. This results in a radical formation in the fullerene cage leading to its instability. To avoid this, we have studied heterofullerenes where one of the carbon atoms is replaced by a nitrogen atom. Specifically, we have studied Ln₂@C₅₉N and Ln₂@C₇₉N, where strong delocalisation of the electron yields a mixed valence-like behaviour. This suggests a double-exchange (B) is operational, and CASSCF calculations yield a B value of 434.8 cm⁻¹ and resultant J_Gd–rad of 869.5 cm⁻¹ for the Gd₂@C₅₉N complex. These parameters are found to be two times larger than the world-record J reported for Gd₂@C₇₉N. Further ab initio calculations reveal an unprecedented U_cal of 1183 and 1501 cm⁻¹ for Dy₂@C₅₉N and Tb₂@C₅₉N, respectively. Thus, this study offers strong exchange coupling as criteria for new generation SMMs as the existing idea of enhancing the blocking barrier via crystal field modulation has reached its saturation point.

Using ab initio calculations, we have made some robust predictions towards lanthanofullerene SMMs exhibiting remarkable characteristics.