Online aerosol mass spectrometry of single micrometer-sized particles containing poly(ethylene glycol)

The analysis of poly(ethylene glycol) (PEG)-containing particles by online single particle aerosol mass spectrometers equipped with laser desorption/ionization (LDI) is reported. We demonstrate that PEG-containing particles are useful in the development of aerosol mass spectrometers because of their ease of preparation, low cost, and inherently recognizable mass spectra. Solutions containing millimolar quantities of PEGs were nebulized and, after drying, the resultant micrometer-sized PEG-containing particles were sampled. LDI (266 nm) of particles containing NaCl and PEG molecules of average molecular weight<500 Da generated mass spectra reminiscent of mass spectra of PEG collected by other mass spectrometer platforms including the characteristic distribution of positive ions (Na+ adducts) separated by the 44 m/z units of the ethylene oxide units separating each degree of polymerization. PEGs of average molecular weight>500 Da were detected from particles that also contained the tripeptide tyrosine-tyrosine-tyrosine or 2,5-dihydroxybenzoic acid, which were added to nebulized solutions to act as matrices to assist LDI using pulsed 266 nm and 355 nm lasers, respectively. Experiments were performed on two aerosol mass spectrometers, one reflectron and one linear, that each utilize two time-of-flight mass analyzers to detect positive and negative ions created from a single particle. PEG-containing particles are currently being employed in the optimization of our bioaerosol mass spectrometers for the application of measurements of complex biological samples, including human effluents, and we recommend that the same strategies will be of great utility to the development of any online aerosol LDI mass spectrometer platform.     

An improved algorithm for analytical gradient evaluation in resolution-of-the-identity second-order Møller-Plesset perturbation theory: application to alanine tetrapeptide conformational analysis

We present a new algorithm for analytical gradient evaluation in resolution‐of‐the‐identity second‐order Møller‐Plesset perturbation theory (RI‐MP2) and thoroughly assess its computational performance and chemical accuracy. This algorithm addresses the potential I/O bottlenecks associated with disk‐based storage and access of the RI‐MP2 t‐amplitudes by utilizing a semi‐direct batching approach and yields computational speed‐ups of approximately 2–3 over the best conventional MP2 analytical gradient algorithms. In addition, we attempt to provide a straightforward guide to performing reliable and cost‐efficient geometry optimizations at the RI‐MP2 level of theory. By computing relative atomization energies for the G3/99 set and optimizing a test set of 136 equilibrium molecular structures, we demonstrate that satisfactory relative accuracy and significant computational savings can be obtained using Pople‐style atomic orbital basis sets with the existing auxiliary basis expansions for RI‐MP2 computations. We also show that RI‐MP2 geometry optimizations reproduce molecular equilibrium structures with no significant deviations (>0.1 pm) from the predictions of conventional MP2 theory. As a chemical application, we computed the extended‐globular conformational energy gap in alanine tetrapeptide at the extrapolated RI‐MP2/cc‐pV(TQ)Z level as 2.884, 4.414, and 4.994 kcal/mol for structures optimized using the HF, DFT (B3LYP), and RI‐MP2 methodologies and the cc‐pVTZ basis set, respectively. These marked energetic discrepancies originate from differential intramolecular hydrogen bonding present in the globular conformation optimized at these levels of theory and clearly demonstrate the importance of long‐range correlation effects in polypeptide conformational analysis. © 2007 Wiley Periodicals, Inc. J Comput Chem, 2007     

HEPES-stabilized encapsulation of Salmonella typhimurium

Most bacteria, planktonic and sessile, are encapsulated inside loosely bound extracellular polymeric substance (EPS) in their physiological environment. Imaging a bacterium with its capsule requires lengthy sample preparation to enhance the capsular contrast. In this study, Salmonella typhimurium was investigated using atomic force microscopy for a practical means of imaging an encapsulated bacterium in air. The investigation further aimed to determine the relation between the buffers used for preparing the bacterium and the preservation of the capsular material surrounding it. It was observed that rinsing bacteria with HEPES buffer could stabilize and promote capsule formation, while rinsing with PBS, Tris, or glycine removes most of the capsular EPS. For bacteria rinsed with HEPES and air-dried, the height images showed only the contour of the capsular material, while the phase and amplitude images presented the detailed structures of the bacterial surface, including the flagella encapsulated inside the capsular EPS. The encapsulation was attributed to the cross-linking of the acidic exopolysaccharides mediated by the piperazine moiety of HEPES through electrostatic attraction. This explanation is supported by encapsulated bacteria observed for samples rinsed with N,N'-bis(2-hydroxyethyl)-piperazine solution and by the presence of entrapped HEPES within the dry capsular EPS suggested by micro-Raman spectroscopy.     

Photoinduced electron transfer on aqueous carbon nanohorn-pyrene-tetrathiafulvalene architectures

Water-soluble carbon-nanohorn-tetrathiafulvalene (CNH-TTF) nanoensembles were prepared by utilizing positively charged pyrene as an assembly medium and characterized by spectroscopy and electron microscopy. Electronic interactions within the nanoensemble were probed by optical spectroscopy, indicating electron transfer between the TTF units and CNHs after light illumination.     

Tetra‐μ‐chloro‐1:2κ4Cl;1:3κ4Cl‐bis(4,4′‐di­methyl‐2,2′‐bi­pyridine)‐2κ2N,3κ2N‐lithium(I)­dipalladium(II) tetrakis­(penta­fluoro­phenyl)­borate di­chloro­methane 1.196‐solvate

In the crystal structure of the title compound, [LiPd₂Cl₄(C₁₂H₁₂N₂)₂](C₂₄F₂₀B)·1.196CD₂Cl₂ or [{(Me₂bipy)PdCl₂}₂(μ‐Li)]⁺·B(C₆F₅)₄⁻·1.196CD₂Cl₂ (Me₂bipy is 4,4′‐di­methyl‐2,2′‐bi­pyridine), an Li⁺ cation is stabilized by complexation with two (Me₂bipy)PdCl₂ units through weak Li—Cl interactions. This compound is thus a rare example of a complex that exhibits an arrested Cl⁻ abstraction.     

Untersuchung von Getreide, Mehl und Mehlerzeugnissen

Ohne Zusammenfassung     

Symmetry constraints on the configurational properties of non-linear molecules

Symmetry constraints on coefficients in the generalized spherical harmonic expansions of configurational properties are derived for pairs of non-linear molecules. Constraints are also obtained for the coefficients in the expansion of the time dependent reorientational distribution function for a non-linear molecule. In addition to invariance under the operations of the molecular point group, these properties must be invariant to interchange (for pairs of identical molecules) and to changes in the ‘handedness’ of the coordinate axes (for optically inactive molecules). Specific results are given for the configurational properties of tetrahedra, but other simple non-linear point groups are briefly considered. In the time dependent case, several types of molecular symmetry are discussed (including tetrahedral), and the relationship between point group constraints and the results for anisotropic rotational diffusion models is clarified.     

Dimensionality selection in a molecule-based magnet

Gaining control of the building blocks of magnetic materials and thereby achieving particular characteristics will make possible the design and growth of bespoke magnetic devices. While progress in the synthesis of molecular materials, and especially coordination polymers, represents a significant step towards this goal, the ability to tune the magnetic interactions within a particular framework remains in its infancy. Here we demonstrate a chemical method which achieves dimensionality selection via preferential inhibition of the magnetic exchange in an S=1/2 antiferromagnet along one crystal direction, switching the system from being quasi-two- to quasi-one-dimensional while effectively maintaining the nearest-neighbor coupling strength.