Decay of the transient Cu(B)-CO complex is accompanied by formation of the heme Fe-CO complex of cytochrome cbb(3)-CO at ambient temperature: evidence from time-resolved Fourier transform infrared spectroscopy

Time-resolved step-scan Fourier infrared spectroscopy has been used to study the CO-bound cbb(3)-type cytochrome c oxidase from Pseudomonas stutzeri at room temperature. We observe a single band in the FTIR spectrum at 1956 cm(-1) (beta-form). The time-resolved data indicate that upon photolysis, CO is transferred from heme b(3) (nu(CO) = 1956 cm(-1)) to CuB (nu(CO) = 2064 cm(-1)). The decay of the 2065 cm(-1) peak (t(1/2) = 120 +/- 16 ms) and the development of the 1956 cm(-1) peak (t(1/2) = 144 +/- 8 ms ) suggest that formation of the Fe-CO complex is concurrent with the decay of the CuB-CO complex. The intensity ratio of the Fe-CO/CuB-CO (2.15) remains constant for all data points, and thus we conclude that no fraction of CO escapes the binuclear center at 293 K.     

Exponentially divergent trajectories and RRKM behaviour of Ar3 clusters

The rate of exponential divergence of two initially adjacent trajectories has been studied for Ar₂ clusters at low and high energies. It is found that at the dissociation limit energy randomization occurs during two typical vibrational periods. Lifetime distributions for energies not far above the dissociation limit have a random lifetime pattern but highly energized clusters show non-RRKM behaviour     

Water clusters: the (H2O)64 case

Minimum energy structures and dynamics of (H₂O)₆₄ cluster are investigated by molecular dynamics techniques and an empirical potential energy surface. Using plots of the cluster, the oxygen-oxygen distance distribution function, and power spectra, we show the existence of minima with deformed cubic arrangement. These results together with previous calculations on smaller clusters support the conclusion that the cubic type geometries are common among water aggregates.     

Unravelling the Photoprotection Properties of Garden Cress Sprout Extract

Plants, as with humans, require photoprotection against the potentially damaging effects of overexposure to ultraviolet (UV) radiation. Previously, sinapoyl malate (SM) was identified as the photoprotective agent in thale cress. Here, we seek to identify the photoprotective agent in a similar plant, garden cress, which is currently used in the skincare product Detoxophane nc. To achieve this, we explore the photodynamics of both the garden cress sprout extract and Detoxophane nc with femtosecond transient electronic absorption spectroscopy. With the assistance of liquid chromatography-mass spectrometry, we determine that the main UV-absorbing compound in garden cress sprout extract is SM. Importantly, our studies reveal that the photoprotection properties of the SM in the garden cress sprout extract present in Detoxophane nc are not compromised by the formulation environment. The result suggests that Detoxophane nc containing the garden cress sprout extract may offer additional photoprotection to the end user in the form of a UV filter booster.     

Intramolecular thiomaleimide [2 + 2] photocycloadditions: stereoselective control for disulfide stapling and observation of excited state intermediates by transient absorption spectroscopy

Thiomaleimides undergo efficient intermolecular [2 + 2] photocycloaddition reactions and offer applications from photochemical peptide stapling to polymer crosslinking; however, the reactions are limited to the formation of the exo head-to-head isomers. Herein, we present an intramolecular variation which completely reverses the stereochemical outcome of this photoreaction, quantitatively generating endo adducts which minimise the structural disturbance of the disulfide staple and afford a 10-fold increase in quantum yield. We demonstrate the application of this reaction on a protein scaffold, using light to confer thiol stability to an antibody fragment conjugate. To understand more about this intriguing class of [2 + 2] photocycloadditions, we have used transient absorption spectroscopy (electronic and vibrational) to study the excited states involved. The initially formed S₂ (π₁π*) excited state is observed to decay to the S₁ (n₁π*) state before intersystem crossing to a triplet state. An accelerated intramolecular C–C bond formation provides evidence to explain the increased efficiency of the reaction, and the impact of the various excited states on the carbonyl vibrational modes is discussed.

Tethered bromomaleimides are described which undergo thiol conjugation and rapid regio- and stereoselective photocycloadditions to serve as disulfide staples; with the excited state intermediates observed by transient absorption spectroscopies.     

Investigating the Ultrafast Dynamics and Long-Term Photostability of an Isomer Pair,Usujirene and Palythene,from the Mycosporine-like Amino Acid Family

Mycosporine-like amino acids are a prevalent form of photoprotection in micro- and macro-organisms. Using a combination of natural product extraction/purification and femtosecond transient absorption spectroscopy, we studied the relaxation pathway for a common mycosporine-like amino acid pair, usujirene and its geometric isomer palythene, in the first few nanoseconds following photoexcitation. Our studies show that the electronic excited state lifetimes of these molecules persist for only a few hundred femtoseconds before the excited state population is funneled through an energetically accessible conical intersection with subsequent vibrational energy transfer to the solvent. We found that a minor portion of the isomer pair did not recover to their original state within 3 ns after photoexcitation. We investigated the long-term photostability using continuous irradiation at a single wavelength and with a solar simulator to mimic a more real-life environment; high levels of photostability were observed in both experiments. Finally, we employed computational methods to elucidate the photochemical and photophysical properties of usujirene and palythene as well as to reconcile the photoprotective mechanism.     

Universality and asymptotics of graph counting problems in non-orientable surfaces

Bender-Canfield showed that a plethora of graph counting problems in orientable/non-orientable surfaces involve two constants tg and pg for the orientable and the non-orientable case, respectively. T.T.Q. Le and the authors recently discovered a hidden relation between the sequence tg and a formal power series solution u(z) of the Painlevé I equation which, among other things, allows to give exact asymptotic expansion of tg to all orders in 1/g for large g. The paper introduces a formal power series solution v(z) of a Riccati equation, gives a non-linear recursion for its coefficients and an exact asymptotic expansion to all orders in g for large g, using the theory of Borel transforms. In addition, we conjecture a precise relation between the sequence pg and v(z). Our conjecture is motivated by the enumerative aspects of a quartic matrix model for real symmetric matrices, and the analytic properties of its double scaling limit. In particular, the matrix model provides a computation of the number of rooted quadrangulations in the 2-dimensional projective plane. Our conjecture implies analyticity of the O(N)- and Sp(N)-types of free energy of an arbitrary closed 3-manifold in a neighborhood of zero. Finally, we give a matrix model calculation of the Stokes constants, pose several problems that can be answered by the Riemann-Hilbert approach, and provide ample numerical evidence for our results.     

Conservation of ultrafast photoprotective mechanisms with increasing molecular complexity in sinapoyl malate derivatives

Sinapoyl malate is a natural plant sunscreen molecule which protects leaves from harmful ultraviolet radiation. Here, the ultrafast dynamics of three sinapoyl malate derivatives, sinapoyl L-dimethyl malate, sinapoyl L-diethyl malate and sinapoyl L-di-t-butyl malate, have been studied using transient electronic absorption spectroscopy, in a dioxane and methanol solvent environment to investigate how well preserved these dynamics remain with increasing molecular complexity. In all cases it was found that, upon photoexcitation, deactivation occurs via a trans-cis isomerisation pathway within ∼20–30 ps. This cis-photoproduct, formed during photodeactivation, is stable and longed-lived for all molecules in both solvents. The incredible levels of conservation of the isomerisation pathway with increased molecular complexity demonstrate the efficacy of these molecules as ultraviolet photoprotectors, even in strongly perturbing solvents. As such, we suggest these molecules might be well-suited for augmentations to further improve their photoprotective efficacy or chemical compatibility with other components of sunscreen mixtures, whilst conserving their underlying photodynamic properties.     

Universal frames

For a class of frames we define the notion of a universal element and prove that in the class of all frames of weight less than or equal to a fixed infinite cardinal number τ there are such elements.