An efficient and convenient synthesis of unsymmetrical disulfides from thioacetates

We have developed convenient methods for the synthesis of functionalized unsymmetrical dialkyl disulfides under mild conditions in very good yields. The designed method is based on the reaction of (5,5-dimethyl-2-thioxo-1,3,2-dioxaphosphorinan-2-yl)-disulfanyl derivatives 1 with functionalized alkyl thiolate anions, generated in situ from thioacetates 2 and sodium methoxide or butylamine. The developed method allows the preparation of unsymmetrical disulfides bearing additional hydroxy, carboxy, amino, azido, biotin, or maleimide functionalities.     

Microstructure of nickel nanoparticles embedded in carbon films: case study on annealing effect by micromorphology analysis

The presented study is aimed at analyzing the surface texture of amorphous hydrogenated carbon layers containing nickel nanoparticles (Ni‐NPs@a‐C:H) within their structure, which were deposited by Radio Frequency (RF) sputtering and RF‐Plasma Enhanced Chemical Vapor Deposition (RF‐PECVD) methods on glass substrates. Prepared films were then used as research material following their annealing at two different temperatures of 250 °C and 350 °C in an inert argon atmosphere. Series of height samples were taken with the help of atomic force microscopy (AFM) operating in a non‐contact mode and examined in order to determine their fractal characteristics. Raw AFM data were first plane‐fitted to remove the surface bow exhibiting the so‐called residual surface, and then numerically processed to calculate the Areal Autocorrelation Function (AACF), which was later used to compute the Structure Function (SF). The log–log plots of the latter served for calculation of fractal properties of surfaces under investigation, including fractal dimension D, and pseudo‐topothesy K. The analysis of 3‐D surface texture helps to understand their essential characteristics and their implications as well as graphical models and their implementation in computer simulation. Copyright © 2016 John Wiley & Sons, Ltd.     

Multi-fidelity design optimization of transonic airfoils using physics-based surrogate modeling and shape-preserving response prediction

A computationally efficient design methodology for transonic airfoil optimization has been developed. In the optimization process, a numerically cheap physics-based low-fidelity surrogate (the transonic small-disturbance equation) is used in lieu of an accurate, but computationally expensive, high-fidelity (the compressible Euler equations) simulation model. Correction of the low-fidelity model is achieved by aligning its corresponding airfoil surface pressure distribution with that of the high-fidelity model using a shape-preserving response prediction technique. The resulting method requires only a single high-fidelity simulation per iteration of the design process. The method is applied to airfoil lift maximization in two-dimensional inviscid transonic flow, subject to constraints on shock-induced pressure drag and airfoil cross-sectional area. The results showed that more than a 90% reduction in high-fidelity function calls was achieved when compared to direct high-fidelity model optimization using a pattern-search algorithm.     

Hodge numbers of nodal double octics

Let B be a surface of even degree d in P³ with nodes as the only singular points. In [1] Clemens proved that the topology of the small resolution of the double covering of P³ branched along B depends not only on the number of nodes but also on the so-called defect, a non-negative integer describing their configuration.

The aim of this note is to give an elementary proof of the Clemens. result and to present some geometric interpretation of defect.     

Projective surfaces with many skew lines

We give an example of a smooth surface of degree that contains pairwise disjoint lines. In particular, our example shows that the degree in Miyaoka's bound is sharp.

     

On regularization of plurisubharmonic functions on manifolds

We study the question of when a -plurisubharmonic function on a complex manifold, where is a fixed -form, can be approximated by a decreasing sequence of smooth -plurisubharmonic functions. We show in particular that it is always possible in the compact Kähler case.

     

Direct conversion of secondary phosphine oxides and H‐phosphinates with [Di(acyloxy)iodo]benzenes to phosphinic and phosphonic amides

The reaction of [di(acyloxy)iodo]benzene with secondary phosphine oxides or H‐phosphinates in the presence of primary or secondary amines allows one to obtain phosphinic or phosphonic acids amides in the one‐pot process. We take advantage of the strong acylating system DAIB/R₂P(O)H to phosphinylation of amines. However, the reaction mechanism is multipathway and causes yields of phosphinic or phosphonic acids amides to be moderate. When the concentration of amines is low, the intermolecular process plays a main role leading to the formation of carboxylic amides through mixed phosphoric–carboxylic anhydride, and also in the low concentration of amines, tetrahydrofuran effectively competes with the amines in the nucleophilic attack on the acylating intermediates. © 2009 Wiley Periodicals, Inc. Heteroatom Chem 20:81–86, 2009; Published online in Wiley InterScience ( www.interscience.wiley.com ). DOI 10.1002/hc.20514     

Electron localization function and electron localizability indicator applied to study the bonding in the peroxynitrous acid HOONO

The ground‐state electronic structure of peroxynitrous acid (HOONO) and its singlet biradicaloid form (HO ··· ONO) have been studied using topological analysis of the electron localization function (ELF), together with the electron localizability indicator (ELI‐D), at the DFT (B3LYP, M05, M052X, and M06), CCSD, and CASSCF levels. Three isomers of HOONO (cis‐cis, cis‐perp, and trans‐perp) have been considered. The results show that from all functionals applied, only B3LYP yields the correct geometrical structure. The ELF and ELI‐D‐topology of the O? O and central N? O bonds strongly depends on the wave function used for analysis. Calculations carried out at CAS (14,12)/aug‐cc‐pVTZ//CCSD(T)/aug‐cc‐pVTZ level reveal two bonds of the charge‐shift type: a protocovalent N? O bond with a basin population of 0.82–1.08e, and a more electron depleted O? O bond with a population of 0.66–0.71e. The most favorable dissociation channel (HOONO → HO + ONO) corresponds to breaking of the most electron‐deficient bond (O? O). In the case of cis‐ and trans‐HO ··· ONO, the ELF, ELI‐D, and electron density fields results demonstrate a closed‐shell O ··· O interaction. The α‐spin electrons are found mainly (0.64e) in the lone pairs of oxygen V_{i = 1,2} (O) from the OH group. The β‐spin electrons are delocalized over the ONO group, with the largest concentration (0.34e) on the lone pair of nitrogen V(N). © 2011 Wiley Periodicals, Inc. J Comput Chem, 2011     

Synthesis and EPR Studies of 2′‐Deoxyuridines with Alkynyl,Rodlike Linkages

Sonogashira coupling of diacetyl 5‐ethynyl‐2′‐deoxyuridine with diacetyl 5‐iodo‐2′‐deoxyuridine gave the acylated ethynediyl‐linked 2′‐deoxyuridine dimer ( 3 b ; 63 %), which was deprotected with ammonia/methanol to give ethynediyl‐linked 2′‐deoxyuridines ( 3 a ; 79 %). Treatment of 5‐ethynyl‐2′‐deoxyuridine ( 1 a ) with 5‐iodo‐2′‐deoxyuridine gave the furopyrimidine linked to 2′‐deoxyuridine (78 %). Catalytic oxidative coupling of 1 a (O₂, CuI, Pd/C, N,N‐dimethylformamide) gave butadiynediyl‐linked 2′‐deoxyuridines ( 4 ; 84 %). Double Sonogashira coupling of 5‐iodo‐2′‐deoxyuridine with 1,4‐diethynylbenzene gave 1,4‐phenylenediethynediyl‐bridged 2′‐deoxyuridines ( 5 ; 83 %). Cu‐catalyzed cycloisomerization of dimers 4 and 5 gave their furopyrimidine derivatives. One‐electron addition to 1 a , 3 a , and 4 gave the anion radical, the EPR spectra of which showed that the unpaired electron is largely localized at C6 of one uracil ring (17 G doublet) at 77 K. The EPR spectra of the one‐electron‐oxidized derivatives of ethynediyl‐ and butadiynediyl‐linked uridines 3 a and 4 at 77 K showed that the unpaired electron is delocalized over both rings. Therefore, structures 3 a and 4 provide an efficient electronic link for hole conduction between the uracil rings. However, for the excess electron, an activation barrier prevents coupling to both rings. These dimeric structures could provide a gate that would separate hole transfer from electron transport between strands in DNA systems. In the crystal structure of acylated dimer 3 b , the bases were found in the anti position relative to each other across the ethynyl link, and similar anti conformation was preserved in the derived furopyrimidine–deoxyuridine dinucleoside.