Isotope ratio monitoring gas chromatography/Mass spectrometry of D/H by high temperature conversion isotope ratio mass spectrometry

Of all the elements, hydrogen has the largest naturally occurring variations in the ratio of its stable isotopes (D/H). It is for this reason that there has been a strong desire to add hydrogen to the list of elements amenable to isotope ratio monitoring gas chromatography/mass spectrometry (irm-GC/MS). In irm-GC/MS the sample is entrained in helium as the carrier gas, which is also ionized and separated in the isotope ratio mass spectrometer (IRMS). Because of the low abundance of deuterium in nature, precise and accurate on-line monitoring of D/H ratios with an IRMS requires that low energy helium ions be kept out of the m/z 3 collector, which requires the use of an energy filter. A clean mass 3 (HD(+.)) signal which is independent of a large helium load in the electron impact ion source is essential in order to reach the sensitivity required for D/H analysis of capillary GC peaks. A new IRMS system, the DELTA(plus)XL(trade mark), has been designed for high precision, high accuracy measurements of transient signals of hydrogen gas. It incorporates a retardation lens integrated into the m/z 3 Faraday cup collector. Following GC separation, the hydrogen bound in organic compounds must be quantitatively converted into H(2) gas prior to analysis in the IRMS. Quantitative conversion is achieved by high temperature conversion (TC) at temperatures >1400 degrees C. Measurements of D/H ratios of individual organic compounds in complicated natural mixtures can now be made to a precision of 2 per thousand (delta notation) or, better, with typical sample amounts of approximately 200 ng per compound. Initial applications have focused on compounds of interest to petroleum research (biomarkers and natural gas components), food and flavor control (vanillin and ethanol), and metabolic studies (fatty acids and steroids). Copyright 1999 John Wiley & Sons, Ltd.     

An efficient RNA-cleaving DNA enzyme that synchronizes catalysis with fluorescence signaling

DNA enzymes are single-stranded DNA molecules with catalytic capabilities that are isolated from random-sequence DNA libraries by "in vitro selection". This new class of catalytic biomolecules has the potential of being used as unique molecular tools in a variety of innovative applications. Here we describe the creation and characterization of an RNA-cleaving autocatalytic DNA, DEC22-18, that uniquely links chemical catalysis with real-time fluorescence signaling capability in the same molecule. A trans-acting DNA molecule, DET22-18, was also developed from DEC22-18 that behaves as a true enzyme with a k(cat) of approximately 7 min(-1)-a rate constant that is the second largest ever reported for a DNA enzyme. It cleaves a chimeric RNA/DNA substrate at the lone RNA linkage surrounded by a closely spaced fluorophore-quencher pair-a unique structure that permits the synchronization of the chemical cleavage with fluorescence signaling. DET22-18 has a stem-loop structure and can be conjugated with DNA aptamers to form allosteric deoxyribozyme biosensors.     

Properties of atoms in molecules

Atomic charges calculated by the population analysis method for three types of semi-empirical wave functions have been compared with charges obtained by integrating the corresponding electronic density functions over individual atomic regions. It was found that the two sets of charges compare quite well for CNDO wave functions and for extended-Hückel functions which are in terms of orthogonalized basis orbitals. However only the CNDO charges are reasonably close to those obtained by integrating near-Hartree-Fock electronic density functions.     

A reversible valence equilibrium in a heavier main group compound

The addition of LiPh to Ar*SnCl (Ar* = C6H3-2,6-Trip2; Trip = C6H2-2,4,6-iPr3) at low temperature afforded the Sn(1)-Sn(III) species Ar*SnSnPh2Ar*, which exists in equilibrium with the Sn(II) compound Ar*SnPh. It is the first example of a room-temperature equilibrium of compounds involving main group elements in different oxidation states.     

Analysis of amines in petroleum

An analytical method for differentiation of primary, secondary, and tertiary amines using exhaustive trifluoroacetylation prior to GC/MS has been developed. Using the conditions described in the report, most primary amines add two and secondary amines add one trifluoroacetyl group. In general, tertiary amines do not react. GC retention indices and relative GC/MS total ion current response factors for 102 trifluoroacetyl derivatives are reported. Examples of the application of the method to petroleum and coal liquid products are provided. Because of the limited thermal stability of the derivatives of primary amines, the method is applicable only to distillates boiling below 370 °C (700 °F).     

The effect of atomic and extra-atomic relaxation on atomic binding energies

An equivalent-cores-relaxation model is given for calculating atomic binding energies from orbital energies using only ground-state atomic properties. The agreement with experiment is excellent for the noble gases. On the basis of present knowledge of atomic relaxation, the phenomenon of “extra-atomic relaxation”, in which electronic charge is attracted toward a hole-state atom, is shown to have an important effect in lowering atomic core-level binding energies in condensed phases. This will affect the interpretation of most core-level binding energies measured to date.     

A Study of Airborne Particles by Emission Spectrographic Method

A rapid spectrographic method was developed to analyze seven elements collected in glass fiber air filters, they were Cd, Pb, Ni, Zn, Sn, Ti and V. Direct excitation method was used for volatile elements while graphite powder was added for determining involatile elements like titanium and vanadium in a dc arc source. Limits of detection for analyzed elements were between 0.01-0.1.μg. This simple and sensitive method was employed to analyze samples from fifteen air sampling stations in different areas of Taiwan.     

Radical cation formation and crystal structure determination of 4′-dimethylamino-10-phenylpyrido[3,2-b]benzothiazine

The crystal structure of title compound, 4 , shows that the 10-aryl group is parallel to the plane bisecting the pyridobenzothiazine ring. This structure is in contrast to that normally found for phenothiazines substituted with electron-withdrawing substituents on the 10-phenyl ring. In those compounds, the 10-aryl group is perpendicular to the plane bisecting the phenothiazine ring. The esr spectrum of the cation radical of 4 shows that the radical is located on the hetero ring system which is opposite to that of the cation radical of 4′-dimethylamino-10-phenylphenothiazine in which the radical is located on the 10-aryl ring.     

Porphyrin effects on zwitterionic HPS micelles as investigated by small-angle X-ray scattering (SAXS) and electron paramagnetic resonance (EPR)

In this work, small-angle X-ray scattering (SAXS) and electron paramagnetic resonance (EPR) studies on the interaction of three anionic mesotetrakis (4-sulfonatophenyl) porphyrins, TPPS4, FeTPPS4, and ZnTPPS4, at concentrations in the 2-10 mM range, with micelles of the zwitterionic surfactant 3-(N-hexadecyl-N,N-dimethylammonium) propane sulfonate (HPS, 30 mM) at pH 4.0 and 9.0 are reported. The SAXS results demonstrate that, upon addition of all species of porphyrins, the HPS micelle of prolate shape reduces its axial ratio from 1.8 +/- 0.2 (in the absence of porphyrin) to 1.5 +/- 0.1. Such an effect is accompanied by a shrinking of the paraffinic shortest semiaxis from 22.5 +/- 0.5 A to 18.0 +/- 0.2 A. This shows that the micellar hydrophobic core is affected by porphyrin incorporation, independent of the type of porphyrin and pH. Concurrently, EPR results demonstrate an increase in the micellar packing as noticed from the increase in motional restriction for both nitroxides. Furthermore, increase of the porphyrin concentration induces the appearance of a repulsive interference function over the SAXS curve of zwitterionic micelles, which is typical of an interaction between surface-charged micelles. Such a finding gives strong evidence that the negatively charged porphyrin molecule must accommodate in the HPS micelle dipole layer close to the inner positive charges (near the hydrophobic core), inducing a surface charge (probably a negative one associated with the HPS sulfonate external groups) in the original zwitterionic (overall neutral) micelle. Such a porphyrin location is favored by both electrostatic and hydrophobic contributions, giving rise to binding constant values that are quite large compared to the binding of cationic drugs to HPS micelles (Caetano, W.; Barbosa, L. R. S.; Itri, R.; Tabak, M. J. Coll. Int. Sci. 2003, 260, 414).