LC-MS Quantification of Site-Specific Phosphorylation Degree by Stable-Isotope Dimethyl Labeling Coupled with Phosphatase Dephosphorylation

Protein phosphorylation is a crucial post-translational modification that plays an important role in the regulation of cellular signaling processes. Site-specific quantitation of phosphorylation levels can help decipher the physiological functions of phosphorylation modifications under diverse physiological statuses. However, quantitative analysis of protein phosphorylation degrees is still a challenging task due to its dynamic nature and the lack of an internal standard simultaneously available for the samples differently prepared for various phosphorylation extents. In this study, stable-isotope dimethyl labeling coupled with phosphatase dephosphorylation (DM + deP) was tried to determine the site-specific degrees of phosphorylation in proteins. Firstly, quantitation accuracy of the (DM + deP) approach was confirmed using synthetic peptides of various simulated phosphorylation degrees. Afterwards, it was applied to evaluate the phosphorylation stoichiometry of milk caseins. The phosphorylation degree of Ser130 on α-S1-casein was also validated by absolute quantification with the corresponding synthetic phosphorylated and nonphosphorylated peptides under a selected reaction monitoring (SRM) mode. Moreover, this (DM + deP) method was used to detect the phosphorylation degree change of Ser82 on the Hsp27 protein of HepG2 cells caused by tert-butyl hydroperoxide (t-BHP) treatment. The results showed that the absolute phosphorylation degree obtained from the (DM + deP) approach was comparable with the relative quantitation resulting from stable-isotope dimethyl labeling coupled with TiO₂ enrichment. This study suggested that the (DM + deP) approach is promising for absolute quantification of site-specific degrees of phosphorylation in proteins, and it may provide more convincing information than the relative quantification method.     

Phase‐separated,conducting composites from polyaniline and benzobisthiazole rigid‐rod polymer

As an alternative method for processing polyaniline (PANI) from its conducting (protonated) state, vacuum casting of PANI from a methanesulfonic acid (MSA) solution provided films with electrical conductivity values of about 130–150 S/cm. In addition, we similarly prepared blended films of PANI · MSA and poly(p‐phenylene benzobisthiazole) (PBZT). This process eliminated the need for a subsequent protonation step and had the additional advantage that the conjugated PBZT may provide alternative conducting pathways. Conductivity values of the composite films ranged from 100 pS/cm to 124 S/cm, and the films displayed critical concentration behavior with a PANI threshold concentration of 2.75% and a critical exponent of 4. Transmission electron micrographs displayed phase‐separated regions with PANI forming a continuous network at high concentrations. Thermogravimetric analysis results demonstrated the thermal and thermooxidative stability advantage of the blends due to the PBZT component. © 2001 John Wiley & Sons, Inc. J Polym Sci Part B: Polym Phys 39: 2539–2548, 2001     

New heterocycles of 2,3‐diaryl‐substituted maleic hydrazides

2,3‐Diaryl‐substituted maleic anhydrides were prepared by a modified one‐pot synthesis of Perkin condensation using mixed sodium salts of arylglyoxylic acid and arylacetic acid with acetic anhydride in 1,4‐dioxane. The treatment of these anhydrides with ammonium bicarbonate, or methanolic hydrazine, offered the corresponding 2,3‐diaryl‐substituted maleimides and maleic hydrazides (4,5‐diaryl‐substituted 1,2‐dihydropyridazine‐3,6‐dione), respectively. Evidence obtained from NMR, UV, and mass spectra suggest that 2,3‐diaryl‐substituted maleic hydrazides do not exhibit monolactim forms. Ring contraction of the diaryl‐substituted maleic hydrazide by nitrosation led to the formation of the corresponding maleimide. Interconversion between the corresponding maleic hydrazide and maleimide was observed following equilibrium reaction. Our experiment proposes that the chemistry of 2,3‐diaryl‐substituted maleic hydrazides rarely involves the function of ethylene moiety and resembles that of succinic hydrazine. J. Heterocyclic Chem.,(2011).     

Preparation and Application of Cholesteryl‐Benzo‐15‐Crown‐5/Cholesteryl Mixed Liquid Crystals

Various mixed liquid crystals containing crown ether‐cholesteryl liquid crystal, benzo‐15‐crown‐5‐COO‐C₂₇H₄₅ (B15C5‐COOCh), with various common cholesteric liquid crystals, e.g., cholesteryl chloride, cholesteryl benzoate and cholesteryl palmitate, were prepared and studied using polarizing microscopy and differential scanning calorimetry. Investigating the concentration effect of B15C5‐COOCh in mixed liquid crystals revealed that the addition of B15C5‐COOCh resulted in wider phase transition temperature ranges of these cholesteryl liquid crystals. The stability of these B15C5‐COOCh/cholesteryl mixed liquid crystals was studied using comprehensive graphic molecular modeling computer programs (Insight II and Discover) to calculate their molecular energy and stability energy. The effect of salts, e.g. Na⁺, Co³⁺, Y³⁺ and La³⁺, on the transition temperature range of the mixed liquid crystals was also investigated. The crown ether cholesteric liquid crystal B15C5‐COOCh was applied both as a surfactant and an ion transport carrier to transport metal ions through liquid membranes. Cholesteryl benzo‐15‐crown‐5 exhibited distinctive characteristics of a surfactant and the critical micellar concentration (CMC) of the surfactant was investigated by the pyrene fluorescence probe method. Cholesteryl benzo‐15‐crown‐5 was successfully applied as a good ion transport carrier (Ionophore) to transport various metal ions, e.g. Li⁺, Na⁺, La³⁺, Fe³⁺ and Co³⁺, through organic liquid membranes. The transport ability of the cholesteryl benzo‐15‐crown‐5 surfactant for these metal ions was in the order: Co³⁺ ≥ Li⁺ > Fe³⁺ > Na⁺ > La³⁺.     

Optically clear simulataneous interpenetrating polymer networks based on poly(ethylene glycol) diacrylate and epoxy. II. Kinetic study

Simultaneous interpenetrating polymer networks (SINs) based on diglycidyl ether of bis-phenol A (DGEBA) and poly(ethylene glycol) diacrylate (PEGDA) in weight ratios of 100/0, 50/50, and 0/100 were blended and cured simultaneously by using benzoyl peroxide (BPO) and m-xylenediamine (MXDA) as curing agents. A kinetic study during SIN formation was carried out at 45, 55, 63, and 70°C. Concentration changes for both the epoxide and C?C bond were monitored with FTIR. A rate expression for DGEBA cure kinetics was established with a model reaction of phenyl glycidyl ether (PGE) and benzylamine. Experimental results revealed that lower rate constants and higher activation energy for the SIN were found, compared with those for the constituent DGEBA and PEGDA network formation. A model of network interlock was proposed to account for this phenomenon. During simultaneous cure of DGEBA and PEGDA, the interlock (mutual entanglement) between DGEBA and PEGDA networks provided a sterically hindered environment, which subsequently increased the activation energy and reduced cure rates for both DGEBA and PEGDA. © 1993 John Wiley & Sons, Inc.     

Novel carbazole/fluorene hybrids: host materials for blue phosphorescent OLEDs

[reaction: see text] A series of carbazole/fluorene (CBZm-Fn) hybrids were effectively synthesized through Friedel-Crafts-type substitution of the carbazole rings. These compounds were thermally and morphologically stable host materials for OLED applications. Efficient blue phosphorescent OLEDs were obtained when employing CBZ1-F2 as the host and FIrpic as the guest.     

Excited-state intramolecular proton transfer molecules bearing o-hydroxy analogues of green fluorescent protein chromophore

o-Hydroxy analogues, 1a-g, of the green fluorescent protein chromophore have been synthesized. Their structures and electronic properties were investigated by X-ray single-crystal analyses, electrochemistry, and luminescence properties. In solid and nonpolar solvents 1a-g exist mainly as Z conformers that possess a seven-membered-ring hydrogen bond and undergo excited-state intramolecular proton transfer (ESIPT) reactions, resulting in a proton-transfer tautomer emission. Fluorescence upconversion dynamics have revealed a coherent type of ESIPT, followed by a fast vibrational/solvent relaxation (<1 ps) to a twisted (regarding exo-C(5)-C(4)-C(3) bonds) conformation, from which a fast population decay of a few to several tens of picoseconds was resolved in cyclohexane. Accordingly, the proton-transfer tautomer emission intensity is moderate (0.08 in 1e) to weak (～10(-4) in 1a) in cyclohexane. The stronger intramolecular hydrogen bonding in 1g suppresses the rotation of the aryl-alkene bond, resulting in a high yield of tautomer emission (Φ(f) ≈ 0.2). In the solid state, due to the inhibition of exo-C(5)-C(4)-C(3) rotation, intense tautomer emission with a quantum yield of 0.1-0.9 was obtained for 1a-g. Depending on the electronic donor or acceptor strength of the substituent in either the HOMO or LUMO site, a broad tuning range of the emission from 560 (1g) to 670 nm (1a) has been achieved.     

Synthesis of selenium-containing biindolyls and their Diels–Alder reaction toward the synthesis of heteroannulated [a]- and [c]-carbazoles

We reported the first syntheses of 2- and 3-(2-(benzo[b]selenophen-2-yl)-indoles and their Diels–Alder reactions to furnish six unique annulated benzoselenphene carbazoles. This facile route can be used to synthesize selenium-containing biindolyl derivatives that possessed potential pharmaceutical activities.     

Applications of Macrocyclic Polyethers in Analytical Sensors and Ion Separation

Artificial macrocyclic polyethers were synthesized and applied as neutral carriers for ion-selective PVC membrane electrodes, ion-chromatographic packing materials, extractants and adsorbents for ion separation, coating materials for piezoeletrical membrane sensors for organic species, and ion-transport carriers through liquid membranes. Ion-selective electrodes such as those for K⁺ Na⁺, UO₂²⁺, Cs⁺, Pb²⁺, Fe³⁺, Hg²⁺ and Ag⁺ ions based on crown ether-phosphotungstic acid (PW) precipitates and dithio crown ethers respectively were prepared and showed good sensitivity and selectivity. Crown ether-PW precipitates were applied as adsorbents of rare-earth ions and some common heavy-metal ions. Some rare-earth ions were easily extracted with crown ethers, especially 15-crown-5. Poly(stytene/divinyl benzene) cryptand-22 resin was synthesized and applied as a bifunctional stationary phase of ion chromatography to separate bom cations and anions, even some organic carboxylate geometric isomers. Crown ethers such as mono-benzo-15-crown-5 was successfully applied as a coating material on piezoelectric quartz membrane sensors for some organic species. The oscillation frequency of the crown-ether quartz-membrane sensor was sensitive to organic vapours such as amines and alcohols. Upon adsorption of organic species on the crown-ether quartz membrane, the oscillation frequency of the sensor decreased obviously. Special crown ether such as dibenzo-16-crown-5-oxyacetic acid, decyl-cryptand-22 and 1, 4-dihydro-pyridine-18-crown-5 were synthesized and successfully applied as ion-transport carriers (ionophores) for transport of Na⁺ K⁺ and Mg²⁺ ions through liquid membranes.     

Implicit weighted essentially non‐oscillatory schemes for the incompressible Navier–Stokes equations

A class of lower–upper/approximate factorization (LUAF) implicit weighted essentially non‐oscillatory (ENO; WENO) schemes for solving the two‐dimensional incompressible Navier–Stokes equations in a generalized co‐ordinate system is presented. The algorithm is based on the artificial compressibility formulation, and symmetric Gauss–Seidel relaxation is used for computing steady state solutions while symmetric successive overrelaxation is used for treating time‐dependent flows. WENO spatial operators are employed for inviscid fluxes and central differencing for viscous fluxes. Internal and external viscous flow test problems are presented to verify the numerical schemes. The use of a WENO spatial operator not only enhances the accuracy of solutions but also improves the convergence rate for the steady state computation as compared with using the ENO counterpart. It is found that the present solutions compare well with exact solutions, experimental data and other numerical results. Copyright © 1999 John Wiley & Sons, Ltd.