Conformational Studies on Polytripeptides as a Model of Collagen

To study the role of glycine residues in stabilizing the collagen triple helix, the glycine residues in the polytripeptide (Pro-Ala-Gly)_n were partially replaced by alanine. The proline content was kept constant. The stability of the helical conformation of these polypeptides was studied by IR- and X-ray measurements in the solid state and by ORD, CD and viscometry in solution. The renaturation was followed as a function of time. All the polytripeptides studied, with the exception of (-Pro-Ala-Ala-)_n attained the polyproline II conformation. However the stability decreased with increasing alanine content. Obviously the molecules of (-Pro-Ala-Gly-) are highly associated by intermolecular hydrogen bonds and one may therefore suppose that a triple-stranded helix aggregation occurs. The results of the refolding process show that the stability of the helices seems to also affect the refolding rate in terms of the optical rotation, Two transitions appeared: the first one is responsible for a rapid reversible change in conformation and the second one for a further slow and irreversible change in the hydrodynamic shape. The latter seems to be due to the partial helical nature, leading to higher chain mobility.     

Proof of the Fukui conjecture via resolution of singularities and related methods. II $$^{\star}$$

The present article is a direct continuation of the first part of this series. We reduce a proof of the Fukui conjecture (concerning the additivity problem of the zero-point vibrational energies of hydrocarbons) to that of a proposition related to the theory of algebraic curves, so that we can focus on the key mechanism of the additivity phenomena. Namely, by establishing what is called the Basic Piecewise Monotone Theorem (BPMT), we reduce a proof of the Fukui conjecture to that of a proposition, called the Local Analyticity Proposition, Version 1 (LAP1), which admits a proof via resolution of singularities. By LAP1, the essential part of the mechanism of the asymptotic linearity phenomena is extracted and is elucidated by using tools from the mathematical theory of algebraic curves, whose language is of vital importance in analyzing the crux of the additivity mechanism. Dedicated to the memory of Prof. Kenichi Fukui (1918–1998).     

Characterization of molecular transport in poly(dimethylsiloxane) microchannels for electrophoresis fabricated with synchrotron radiation-lithography and UV-photolithography

In the present paper, a study was undertaken of molecular transport in ploy(dimethylsiloxane) microchannels that were fabricated by ultraviolet (UV)-photolithography and synchrotron radiation (SR)-lithography characterized and compared for microchip capillary electrophoresis by evaluating in-channel molecular dispersion. A fluorescent tag, sulforhodamine B was used as the probing molecule. It was found that microchannels made by SR-lithography fabrication were superior to those made by UV-photolithography fabrication in terms of molecular transport performance. A deep insight into surface conditions characterized by scanning electron microscopy suggested it was related to the difference in surface roughness. Chromatographic retention in electropherograms further supported such a conclusion, which depended on the phase ratio of the channel surface. The results revealed for PDMS microchannels in this work were in good agreement with the phenomenon found for glass microchannels in the literature.     

Side chain-directed assembly of triangular molecular panels into a tetrahedron vs. open cone

Despite their structural similarity, triangular tetradentate ligands 2b and 2c experience different assembly pathways on complexation with (en)Pd(NO3)2 to give M8L4 tetrahedral (3) and open cone (4) structures, respectively, due to steric restriction by side chains at the corner or on the edge of the ligands.     

New Proof of the Fukui Conjecture by the Functional Asymptotic Linearity Theorem

The present article provides a new proof of the Fukui conjecture concerning the additivity problem of the zero-point vibrational energies of hydrocarbons. This conjecture played a prominent role in the initial development of the repeat space theory (RST), and continues to be of vital significance in the recent development of the theory of the generalized repeat space X _r (q,d). The new proof of the Fukui conjecture has been given here by establishing the functional version of the Asymptotic Linearity Theorem (ALT), the Functional ALT. This enhanced version of the ALT directly implies the validity of the Fukui conjecture; it easily unifies, in a broad perspective, a variety of additivity phenomena in physico-chemical network systems having many identical moieties, and efficiently solves some interpretational problems of the empirical additivity formulae from experimental chemistry. The proof of the functional version of the ALT is based on a new method transferable to the extended theoretical framework of the generalized repeat space X _r (q,d).     

Self-organization of polymer particles on hydrophobic solid substrates in aqueous media. I. Self-organization of cationic polymer particles on alkylated glass plates

Monodisperse, cationic polymer particles bearing quaternary ammonium groups effectively self-organized on hydrophobic solid substrates such as alkylated glass plates and polymer films to form particle monolayers. With an increase of the particle surface charge density, the surface coverage decreased and the morphology of particle monolayers changed from aggregated type to dispersed type. The dispersed type of particle monolayers having a relatively regular particle distance was formed at higher temperature. The self-organization behaviors on alkylated glass plates were different from those on unmodified glass plates through electrostatic interaction. The formation of particle monolayers on alkylated glass plates occurred only over a certain latex concentration range in contrast with that on unmodified glass plate. The adhesive strength of particle monolayers was enhanced by annealing at temperatures above the glass transition temperature (T _g) of the particles. Lens-shaped particle monolayers were fabricated by annealing the dispersed type of particle monolayers.     

A novel scheme of heterogeneous polymerization of ethylene

The heterogeneous polymerization of ethylene initiated by radiation in tert-butyl alcohol was studied. The polymerization was carried out in a 100-ml reactor at 25–100°C and pressures of 200–300 kg/cm² in the presence of 50 ml of tert-butyl alcohol containing 7 wt-% water. The amounts of polymerized monomer, the average molecular weight of polymer formed, and the molecular weight distribution of polymer were measured at various stages of reaction and at various temperatures. The molecular weight distribution was found to be very much dependent on the reaction time and temperature. For the polymer formed at 50–60°C in the very early stages of reaction, the molecular weight distribution is unimodal, and in the intermediate stage a shoulder appears at a molecular weight higher than the first peak which increases as the polymerization proceeds; eventually a bimodal curve is formed. The bimodal distribution curves were analyzed to determine the fractions and average molecular weights of the each peak. On the basis of these data for the molecular weight distribution and kinetic behavior, a new scheme for the heterogeneous polymerization is proposed which indicates that the polymerization proceeds via propagating radicals in two different physical states, namely, loose and rigid states.     

Photocatalytic Reduction of NO with C2H6 on a Hollandite-Type Catalyst

The photocatalytic reduction of nitrogen monoxide (NO) with ethane on the hollandite type catalyst (K₂Ga₂Sn₆O₁₆KGSO) was investigated. Using a closed-gas circulating system equipped with a Q-MASS detector and in-situ diffuse reflectance FT-IR spectroscopy. The reactant gases of NO and ¹³C₂H₆ decreased with the increasing irradiation time. In contrast, the N₂ yield increased proportionally to the conversion of ¹³C₂H₆. Nitrogen oxides such as N₂O did not reach their detectable levels. The NO adsorbed on KGSO was found to change to its activated species by UV irradiation. The oxidized products of C₂H₆ such as CH₃CHO increased in proportion to the reaction time. The present results strongly suggest that KGSO has remarkable photocatalytic activity for the reduction of NO with C₂H₆.     

Synthesis of 4-[(1,3-diaminopyrrolo[3′,4′:4,5]pyrido[2,3-d]-pyrimidin-8-yl)benzoyl]-L-glutamic acid as a potential antifolate

This paper is dedicated to the memory of Professor Roland K. Robins The synthesis of 4-[(1,3-diaminopyrrolo[3′,4′:4,5]pyrido[2,3-d]pyrimidin-8-yl)benzoyl]-L-glutamic acid ( 18 ), a potential antifolate and anticancer agent, has been achieved starting from 1,4-dibromobutan-2-ol with alkyl p-aminobenzoic acids. Condensation of these two agents gave 1-(4-alkoxycarbonylphenyl)pyrrolidin-3-ols 7a,b , which were oxidized to the corresponding pyrrolidin-3-one derivatives 8a,b . Compounds 8a,b were converted into 1,3-diamino-8-(4-alkoxycarbonylphenyl)-7,8-dihydro-9H-pyrrolo[3′,4′:4,5]pyrido[2,3-d]pyrimidines 12a,b in 4 steps. Saponification of 12b the benzoate ester and coupling with di-tert-butyl glutamate afforded a mixture of 7,8-dihydro product 16 and its aromatized derivative 17 . Finally hydrolysis of esters 16 or 17 gave only the title compound 18 . The 7,8-dihydro tricyclic derivatives were easily air-oxidized to form their fully aromatized compounds. The title compound 18 was one tenth less active than MTX against HL-60 cells in culture.     

Infrared spectroscopic study on the reaction mechanism of CO hydrogenation over Pd/CeO2

In situ infrared spectroscopy was applied to elucidate the reaction mechanism of CO hydrogenation over Pd/CeO₂. Instead of direct dissociation of CO, a new reaction pathway is proposed for methane formation, involving geminal dicarbonyl intermediates and (HCO)₂(a) intermediates, which may be located on the surface of Pd covered with thin layers of reduced ceria (SMSI effect). Transformation of methane formation sites into methanol formation ones by the oxidation with water vapor formed during the CO?H₂ reaction is proposed, which may be located on the Pd (111) planes adjacent to ceria support.