Analysis of oligonucleotides using coupled high performance liquid chromatography-electrospray mass spectrometry

Summary Improved HPLC and ESMS conditions have been established, allowing the separation and analysis of oligodesoxyribonucleotides by coupled HPLC-ESMS.     

Trifluoromethyl-substituted hydantoins, versatile building blocks for rational drug design

Preparatively simple, one-pot syntheses of trifluoromethyl-substituted hydantoins starting from Boc-protected imines of hexafluoroacetone and trifluoropyruvate are described. They represent valuable building blocks for the construction of constrained peptides or as scaffolds for the synthesis of highly potent VLA-4 antagonists.     

Non-equilibrium adsorption at solid/liquid interfaces from polyelectrolyte solutions

The poly(2-vinylpyridine) layer was established at the Pyrex glass/water interface with periodic phases of adsorption/desorption runs observed over several days. This was evidenced by determining the concentration of radio-labelled molecules in the solution equilibrating the glass beads as a function of time (the effluent) while the same radio-labelled polymer was slowly supplied by injecting the polymer solution into the reactor containing the adsorbent at a controlled extremely slow rate. Although the adsorption (or the desorption) steps seemed to present some periodic character, they were better correlated with the successive bulk concentration thresholds that were established with time when the initial surface was free of polymer at time zero. Even when the adsorbent was coated at different degrees, desorption steps were correlated to the overstepping of decreasing concentration thresholds. Adsorption and desorption runs were attributed to the existence of different typical interfacial conformations of the adsorbed macromolecules that only can be stabilised in the adsorbed state when the layer was equilibrated with the polymer solution of a certain concentration. Macromolecule were definitely adsorbed when the reconformation process led to a flat conformation (trains). Macromolecules adsorbed with a conformation close to their solution conformation may be desorbed as a result of the reconformation process affecting previously adsorbed neighbour molecules (in the case of partially coated surfaces at time zero of injection). Macromolecules with loops and tails were retained on the surface when the polymer concentration in the bulk was progressively increased (for uncoated surfaces at time zero of injection). All these effect were attributed to the combined influence of topological effects on adsorption and reconformation of adsorbed macromolecules that characterise the non-equilibrium adsorption processes.     

Solid-phase Suzuki cross-coupling reactions using a phosphine ligand based on a phospha-adamantane framework

The use of a catalyst system based on Pd₂dba₃·CHCl₃ and 1,3,5,7-tetramethyl-2,4,8-trioxa-6-phenyl-6-phospha-adamantane allows for Suzuki coupling aryl halides with an array of boronic acids on a solid-phase platform. The reactions can be carried out at room temperature with low palladium loadings in high yields.     

Solvatochromic and thermochromic shifts of electronic spectra of polar solute molecules in a mixture of polar and nonpolar solvent; the role of solvent-solvent interactions

A theoretical model is proposed to describe the influence of the concentration of a polar solvent and the temperature of a solution on the electronic spectra of a polar solute in a binary solvent mixture. It is shown that the interaction between molecules of the polar solvent in the first solvation shell makes the significant contribution to the formation of absorption and fluorescence bands of the solute. An experimental study of solvatochromic and thermochromic shifts of steady-state fluorescence spectra of 3-amino-N-methylphthalimide in decalin--propanol mixture for different values of propanol mole fraction is carried out. Good qualitative agreement between the experimental data and calculation results is observed.     

Structure of radical cations of saturated heterocyclic compounds with two heteroatoms as studied by electron paramagnetic resonance, electron-nuclear double resonance, and density functional theory calculations

The radical cations of piperazine, morpholine, thiomorpholine, and thioxane were investigated by electron paramagnetic resonance (EPR) and electron-nuclear double resonance (ENDOR) spectroscopy in a solid Freon matrix. Optimized geometry and magnetic parameters of the radical cations were calculated using a density functional theory (DFT)/Perdew-Burke-Ernzerhof (PBE) method. Both experimental and theoretical results suggest that all the studied species adopt chair (or distorted chair) conformations. No evidence for the boat conformers with intramolecular sigma-bonding between heteroatoms were obtained. In the cases of morpholine and thioxane, the oxygen atoms are characterized by relatively small spin populations, whereas a major part of spin density is located at N and S atoms, respectively. The thiomorpholine radical cation exhibits nearly equal spin population of N and S atoms. In most cases (except for thioxane), the calculated magnetic parameters agree with the experimental data reasonably well.     

Deprotonation and dimerization of maleimide in the triplet state: a laser flash photolysis study with optical and conductometric detection

The photochemistry of maleimide in aqueous solution is governed by the coexistence of up to three different triplet states, the keto triplet (lambda(max)=250, 330 nm, lambda(min)=290 nm, pK(a)=4.4+/-0.1, tau=5 micros), the deprotonated or enolate triplet (lambda(max)=360, 260 nm, lambda(min)=320 nm, shoulder at 370-380 nm) and a dimer triplet. This biradical is formed by the addition of the keto triplet to the double bond of a ground state maleimide in competition with electron transfer, (k( (3)MI+MI)=2.6 x 10(9) dm(3) mol(-1) s(-1)). Its spectrum is identical to that of the maleimide H-adduct radical (lambda(max)=370-380 (broad), 255 nm (narrow), lambda(min)=290 nm) and its lifetime is 110 ns. While protolysis is confined to maleimide and aqueous solutions, the dimer triplet is also found in acetonitrile. Dimer triplet formation is also observed with N-ethylmaleimide. Time-resolved conductometry and buffer experiments were used to characterise excited state protolysis. Multi-wavelength "global analysis" of the time profiles allowed the separation of the transient spectra and study of the kinetics of the monomer and dimer triplets. The cyclobutane dimer yield (determined by GC) is independent of maleimide concentration. This indicates that the dimer triplet does not contribute significantly to the initiation of free-radical polymerisation. Time-dependent Hartree-Fock calculations agree with the experimental data and further confirm the proposed mechanisms.     

Halogenometallate von Übergangselementen mit Kationen stickstoffhaltiger heterocyclischer Basen. I. Die Kristallstrukturen von 1,4-Dimethylpiperazinium-tetrachlorocobaltat(II) und -zinkat(II), (dmpipzH2)[MIICl4] (M = Co,Zn)

Halogenometalates of Transition Elements with N-heterocyclic Base Cations. I. The Crystal Structures of 1,4-Dimethylpiperazinium Tetrachlorocobaltate(II) and -zincate(II), (dmpipzH₂)[M^IICl₄] (M = Co, Zn) The compounds (dmpipzH₂)[M^IICl₄] crystallize in the monoclinic space group P2₁/m with a = 6.133(1), b = 14.306(1), c = 6.902(1) Å, β = 90.54(2)°, Z = 2 for M = Co and with a = 6.141(1), b = 14.282(1), c = 6.907(1) Å, β = 90.60(2)°, Z = 2 for M = Zn. The structures consist of tetrahedra [MCl₄]^2? and centrosymmetric cations (dmpipzH₂)²⁺ in the chair form. Bifurcated hydrogen bridging bonds of the N? H …? Cl type connect the nitrogen atom to two chloride ions. Two short distances C …? Cl are interpreted in terms of C? H …?Cl hydrogen bridges.