Development of a heterogeneous chemiluminescent flow immunoassay for DDT and related compounds

A heterogeneous chemiluminescent (CL) flow immunoassay for DDT was optimized comparing different types of immunoaffinity supports: beads, nylon coils and membranes (membranes HyBondN+). In order to characterize solid immunoaffinity supports two basic immunoassay formats were performed, using (1) enzyme-labeled secondary and (2) enzyme-labeled specific monoclonal antibodies (MAbs). In both formats, hapten DDT5 conjugated to ovalbumin immobilized on solid supports according to the appropriate immobilization procedure, enzyme label (horseradish peroxidase, HRP) and luminescent detection (luminol/H₂O₂/p-iodophenol) were used. The lowest limit of detection (LOD), 1 nM p,p-DDT, was obtained with a membrane-based flow immunoassay with HRP-labeled specific antibody. Beads and packed tubing were discarded as appropriate supports because of the difficulties encountered for reproducible packing and the occurrence of light scatterring (beads), which seriously compromised the performance and reproducibility of the flow immunoassay.     

Ab initio molecular-dynamics simulation of aqueous proton solvation and transport revisited

The solvation and transport of the hydrated excess proton is studied using the Car-Parrinello molecular-dynamics (CPMD) simulation method. The simulations were performed using BLYP and HCTH gradient-corrected exchange-correlation energy functionals. The fictitious electronic mass was chosen to be small enough so that the underlying water structural and dynamical properties were converged with respect to this important CPMD simulation parameter. An unphysical overstructuring of liquid water in the CPMD simulations using the BLYP functional resulted in the formation of long-lived hydrogen-bonding structures involving the excess proton and a particular (special) water oxygen. The excess proton was observed to be attracted to the special oxygen through the entire length of the BLYP CPMD simulations. Consequently, the excess proton diffusion was limited by the mobility of the special oxygen in the slowly diffusing water network and, in turn, the excess proton self-diffusion coefficient was found to be significantly below the experimental value. On the other hand, the structural properties of liquid water in the HCTH CPMD simulation were seen to be in better agreement with experiment, although the water and excess proton diffusions were still well below the experimental value.     

Reconstruction of the water-oxidizing complex in manganese-depleted Photosystem II using synthetic manganese complexes

The efficiency of a trinuclear and two binuclear manganese complexes in reconstituting electron transport and O(2) evolution activity in Mn-depleted Photosystem II preparations is analyzed. The trinuclear Mn-complex is more efficient than two binuclear Mn-complexes in restoring oxygen evolution, but it is less effective as an electron donor than binuclear Mn-complexes. It is inferred from our results that recovery of electron transport and O(2) evolution with polynuclear Mn-complexes is affected with different factors. Moreover, the trinuclear Mn-complex is extremely sensitive to the addition of CaCl(2). It is suggested that there is an interaction between Ca(2+) and carboxyl within the trinuclear Mn-complex during photoactivation and this interaction benefits the ligation of Mn atom to the apo-WOC and form an active WOC. Binuclear Mn(III)Mn(III) complex shows slightly higher efficiency than binuclear Mn(III)Mn(IV) complex in restoration of O(2) evolution activity. The efficiency of three Mn-complexes in the reconstitution of WOC is in an order: trinuclear Mn(3)(III)>binuclear Mn(III)Mn(III)>binuclear Mn(III)Mn(IV).     

Photodissociation of heme distal methionine in ferrous cytochrome C revealed by subpicosecond time-resolved resonance Raman spectroscopy

Cytochrome c (cyt c) is an electron-transfer heme protein that also binds nitric oxide (NO). In resting cyt c, two endogenous ligands of the heme iron are histidine-18 (His) and methionine-80 (Met) side chains, and NO binding requires the cleavage of one of the axial bonds. Previous femtosecond transient absorption studies suggested the photolysis of either Fe-His or Fe-Met bonds. We aimed at unequivocally identifying the internal side chain that is photodissociated in ferrous cyt c and at monitoring heme structural dynamics, by means of time-resolved resonance Raman (TR3) spectroscopy with approximately 0.6 ps time resolution. The Fe-His stretching mode at 216 cm-1 has been observed in photoproduct TR3 spectra for the first time for a c-type heme. The same transient mode was observed for a model ferrous cyt c N-fragment (residues 1-56) ligated with two His in the resting state. Our TR3 data reveal that upon ferrous cyt c photoexcitation, (i) distal Met side chain is instantly released, producing a five-coordinated domed heme structure, (ii) proximal His side chain, coupled to the heme, exhibits distortion due to strain exerted by the protein, and (iii) alteration in heme-cysteine coupling takes place along with the relaxation of the protein-induced deformations of the heme macrocycle.     

A concise method for synthesis of diaryl aryl- or alkylphosphonates

A convenient method has been developed to synthesize diaryl arylphosphonates from triaryl phosphites, triethyl phosphite, and aromatic halides. The new method relies on the triethyl phosphite assisted nickel catalyzed Arbuzov reaction and can be applied to synthesize certain diaryl alkylphosphonates without catalysts.     

Express detection of nonylphenol in water samples by fluorescence polarization immunoassay

The development of express method for detection of endocrine-disrupting chemicals (EDC) such as alkylphenols is required for ecological monitoring. Several attempts have been made to produce antibodies against 4-nonylphenol (NP) in recent years. This work describes the production of new antibodies against NP and also summarizes the characterization of antibodies obtained earlier. Three approaches used to produce alkylphenol-specific antibodies are compared; these are based on: 1. omega-(4-hydroxyphenyl)nonanoic or omega-(4-hydroxyphenyl)heptanoic acid NP derivatives designed to mimic the linear NP isomer; 2. 4-aminophenol, which potentially mimics various substituted phenolic compounds with different side-chain structures at position 4 of the benzene ring; and 3. a mixture of branched NP isomers, conjugated to the carrier protein via a benzene ring by the Mannich reaction, and expected to be the closest mimic of NP structure by preserving its natural alkyl moiety.Fluorescence polarization immunoassays based on different combinations of antibody and labeled antigen for screening detection of NP were developed and structural aspects of assay sensitivity and specificity were investigated. The assays based on the antisera raised against omega-(4-hydroxyphenyl)nonanoic acid and NP conjugate via Mannich reaction are capable of express detection of NP with detection limit of 7 microg mL(-1 )and assay dynamic range of 18-300 microg mL(-1).     

The studies of the effect of photostimulated changes in thin carbon films

Photostimulated changes in thin carbon films deposited onto fused silica substrates by reactive magnetron sputtering and irradiated by the light of the first (1060nm) and the second (530nm) harmonics of a QW-switched Nd³⁺ AVG laser were investigated. The changes are supposed to be connected with the reordering of chemical bounds.     

Integrable structure of conformal field theory,quantum KdV theory and Thermodynamic Bethe Ansatz

We construct the quantum versions of the monodromy matrices of KdV theory. The traces of these quantum monodromy matrices, which will be called as “T-operators,” act in highest weight Virasoro modules. TheT-operators depend on the spectral parameter λ and their expansion around λ=∞ generates an infinite set of commuting Hamiltonians of the quantum KdV system. TheT-operators can be viewed as the continuous field theory versions of the commuting transfermatrices of integrable lattice theory. In particular, we show that for the values $c = 1 - 3\frac{{3(2n + 1)^2 }}{{2n + 3}}$ ,n=1,2,3 .... of the Virasoro central charge the eigenvalues of theT-operators satisfy a closed system of functional equations sufficient for determining the spectrum. For the ground-state eigenvalue these functional equations are equivalent to those of the massless Thermodynamic Bethe Ansatz for the minimal conformal field theoryM _2,2n+3; in general they provide a way to generalize the technique of the Thermodynamic Bethe Ansatz to the excited states. We discuss a generalization of our approach to the cases of massive field theories obtained by perturbing these Conformal Field Theories with the operator Φ_1,3. The relation of theseT-operators to the boundary states is also briefly described.     

The regularity of solutions of reaction-diffusion equations via Lagrangian coordinates

In this paper we study the regularity of nonnegative solutions and their interfaces for the nonlinear reaction-diffusion equation $$u_t = \left( {u^m } \right)_{xx} + f\left( u \right),\left( E \right)$$ wherem>1 andf(u) is aC ¹ function withf(0)=0 and is subject to some other technical conditions. This equation has the property of finite propagation which gives rise to interfaces separating regions whereu=0 andu>0. The analysis is carried out by means of Lagrangian coordinates, formally viewing the reaction-diffusion equation as the equation governing the evolution of the density of a certain continuum. Lagrangian coordinates have been successfully applied to study nonlinear diffusion equations posed in one space dimension. The usual formulation applies to equations which can be written in the form of a conservation law, which is not the case here because of the reaction term. In problems exhibiting interfaces such technique has the merit of rendering the interfaces straight lines, much simplifying the analysis. In this paper we present anon-standard Lagrangian formulation that works innon-conservation cases. Equation (E) is then translated into this framework and we find in a natural way the necessary estimates to prove theC ¹ regularity of moving interfaces and the regularity of the weak solution near such an interface, that allows us to establish the dynamic properties of the interface for the solutions. We end the paper by describing how the method can be applied to similar problems inseveral space dimensions with radial symmetry.     

New formulation of restricted growth processes

We present a new formulation of a class of growth models-those which evolve according to an exclusion process. This formulation is based upon a transformation of the probability distribution function which involves Grassmann variables. This method is very general and enables one to derive an exact stochastic differential equation for the model of interest. We describe this method using the traffic model as an example.